RNA–Protein interactions for RNA: ENST00000551956.1

KRT4-204, Transcript of keratin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT4, Length 2,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-204ENST00000551956 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
KRT4-204ENST00000551956 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
KRT4-204ENST00000551956 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
KRT4-204ENST00000551956 FHOD3Q2V2M9 1422 aa21.46■■□□□ 1.03
KRT4-204ENST00000551956 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
KRT4-204ENST00000551956 ITGAEP38570 1179 aa21.42■■□□□ 1.02
KRT4-204ENST00000551956 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
KRT4-204ENST00000551956 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
KRT4-204ENST00000551956 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
KRT4-204ENST00000551956 TARBP1Q13395 1621 aaKnown RBP21.38■■□□□ 1.01
KRT4-204ENST00000551956 CUL7Q14999 1698 aa21.34■■□□□ 1.01
KRT4-204ENST00000551956 PCF11O94913 1555 aaKnown RBP21.34■■□□□ 1.01
KRT4-204ENST00000551956 MIER1Q8N108 512 aa21.34■■□□□ 1.01
KRT4-204ENST00000551956 TIAM1Q13009 1591 aa21.31■■□□□ 1
KRT4-204ENST00000551956 ZNF608Q9ULD9 1512 aaPredicted RBP21.31■■□□□ 1
KRT4-204ENST00000551956 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
KRT4-204ENST00000551956 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
KRT4-204ENST00000551956 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
KRT4-204ENST00000551956 PHLDB1Q86UU1 1377 aa21.27■■□□□ 1
KRT4-204ENST00000551956 CCNB3Q8WWL7 1395 aa21.25■□□□□ 0.99
KRT4-204ENST00000551956 LRRC9Q6ZRR7 1453 aa21.25■□□□□ 0.99
KRT4-204ENST00000551956 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
KRT4-204ENST00000551956 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
KRT4-204ENST00000551956 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
KRT4-204ENST00000551956 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
KRT4-204ENST00000551956 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
KRT4-204ENST00000551956 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
KRT4-204ENST00000551956 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
KRT4-204ENST00000551956 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
KRT4-204ENST00000551956 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.98
KRT4-204ENST00000551956 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
KRT4-204ENST00000551956 MAP3K1Q13233 1512 aa21.13■□□□□ 0.97
KRT4-204ENST00000551956 WDR62O43379 1518 aa21.12■□□□□ 0.97
KRT4-204ENST00000551956 FYCO1Q9BQS8 1478 aa21.12■□□□□ 0.97
KRT4-204ENST00000551956 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
KRT4-204ENST00000551956 SAMD9Q5K651 1589 aa21.12■□□□□ 0.97
KRT4-204ENST00000551956 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
KRT4-204ENST00000551956 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
KRT4-204ENST00000551956 CLSPNQ9HAW4 1339 aa21.08■□□□□ 0.96
KRT4-204ENST00000551956 FMN1Q68DA7 1419 aa21.07■□□□□ 0.96
KRT4-204ENST00000551956 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
KRT4-204ENST00000551956 RAB3GAP2Q9H2M9 1393 aa21.05■□□□□ 0.96
KRT4-204ENST00000551956 FBLN2P98095 1184 aa21.02■□□□□ 0.96
KRT4-204ENST00000551956 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
KRT4-204ENST00000551956 THOC2Q8NI27 1593 aaKnown RBP21.01■□□□□ 0.95
KRT4-204ENST00000551956 MTUS2Q5JR59 1369 aa21.01■□□□□ 0.95
KRT4-204ENST00000551956 IQGAP2Q13576 1575 aa21■□□□□ 0.95
KRT4-204ENST00000551956 MAGI3Q5TCQ9 1506 aa20.99■□□□□ 0.95
KRT4-204ENST00000551956 CDK13Q14004 1512 aaKnown RBP20.93■□□□□ 0.94
KRT4-204ENST00000551956 PTPRKQ15262 1439 aa20.92■□□□□ 0.94
KRT4-204ENST00000551956 FGD6Q6ZV73 1430 aa20.92■□□□□ 0.94
KRT4-204ENST00000551956 SETD5Q9C0A6 1442 aa20.92■□□□□ 0.94
KRT4-204ENST00000551956 NCOA2Q15596 1464 aa20.91■□□□□ 0.94
KRT4-204ENST00000551956 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
KRT4-204ENST00000551956 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
KRT4-204ENST00000551956 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
KRT4-204ENST00000551956 MAPKBP1O60336 1514 aa20.89■□□□□ 0.93
KRT4-204ENST00000551956 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
KRT4-204ENST00000551956 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
KRT4-204ENST00000551956 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
KRT4-204ENST00000551956 UGGT2Q9NYU1 1516 aa20.84■□□□□ 0.93
KRT4-204ENST00000551956 CEP170Q5SW79 1584 aa20.84■□□□□ 0.93
KRT4-204ENST00000551956 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
KRT4-204ENST00000551956 MYOM3Q5VTT5 1437 aa20.81■□□□□ 0.92
KRT4-204ENST00000551956 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
KRT4-204ENST00000551956 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
KRT4-204ENST00000551956 HECW1Q76N89 1606 aa20.77■□□□□ 0.92
KRT4-204ENST00000551956 SUPT6HQ7KZ85 1726 aaKnown RBP20.77■□□□□ 0.92
KRT4-204ENST00000551956 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
KRT4-204ENST00000551956 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
KRT4-204ENST00000551956 RRP7BPQ9NSQ0 103 aa20.76■□□□□ 0.91
KRT4-204ENST00000551956 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
KRT4-204ENST00000551956 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
KRT4-204ENST00000551956 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
KRT4-204ENST00000551956 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
KRT4-204ENST00000551956 JPH4Q96JJ6 628 aa20.73■□□□□ 0.91
KRT4-204ENST00000551956 ZNF644Q9H582 1327 aaPredicted RBP20.73■□□□□ 0.91
KRT4-204ENST00000551956 PTPN23Q9H3S7 1636 aa20.72■□□□□ 0.91
KRT4-204ENST00000551956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
KRT4-204ENST00000551956 KCNH8Q96L42 1107 aa20.68■□□□□ 0.9
KRT4-204ENST00000551956 NAIPQ13075 1403 aa20.68■□□□□ 0.9
KRT4-204ENST00000551956 PRG4Q92954 1404 aaPredicted RBP20.67■□□□□ 0.9
KRT4-204ENST00000551956 NUP160Q12769 1436 aa20.66■□□□□ 0.9
KRT4-204ENST00000551956 RAPGEF6Q8TEU7 1601 aa20.65■□□□□ 0.9
KRT4-204ENST00000551956 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
KRT4-204ENST00000551956 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.89
KRT4-204ENST00000551956 KDM6BO15054 1643 aa20.63■□□□□ 0.89
KRT4-204ENST00000551956 SUPT16HQ9Y5B9 1047 aaKnown RBP20.63■□□□□ 0.89
KRT4-204ENST00000551956 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
KRT4-204ENST00000551956 TCOF1Q13428 1488 aaKnown RBP20.58■□□□□ 0.88
KRT4-204ENST00000551956 FOXD1Q16676 465 aa20.57■□□□□ 0.88
KRT4-204ENST00000551956 ZNF777Q9ULD5 760 aaPredicted RBP20.56■□□□□ 0.88
KRT4-204ENST00000551956 KIF14Q15058 1648 aa20.54■□□□□ 0.88
KRT4-204ENST00000551956 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
KRT4-204ENST00000551956 UACAQ9BZF9 1416 aa20.53■□□□□ 0.88
KRT4-204ENST00000551956 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
KRT4-204ENST00000551956 DENND4BO75064 1496 aaPredicted RBP20.52■□□□□ 0.88
KRT4-204ENST00000551956 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
KRT4-204ENST00000551956 ABCC5O15440 1437 aa20.49■□□□□ 0.87
KRT4-204ENST00000551956 TROQ12816 1431 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms