RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 RIMBP3CA6NJZ7 1639 aa30.9■■■□□ 2.54
DDX54-209ENST00000551912 RIMBP3BA6NNM3 1639 aa30.9■■■□□ 2.54
DDX54-209ENST00000551912 RIMBP3Q9UFD9 1639 aa30.9■■■□□ 2.54
DDX54-209ENST00000551912 SHROOM2Q13796 1616 aa30.86■■■□□ 2.53
DDX54-209ENST00000551912 JPH4Q96JJ6 628 aa30.85■■■□□ 2.53
DDX54-209ENST00000551912 KIF21BO75037 1637 aa30.8■■■□□ 2.52
DDX54-209ENST00000551912 IQGAP2Q13576 1575 aa30.79■■■□□ 2.52
DDX54-209ENST00000551912 PRG4Q92954 1404 aaPredicted RBP30.77■■■□□ 2.52
DDX54-209ENST00000551912 CTTNBP2Q8WZ74 1663 aa30.74■■■□□ 2.51
DDX54-209ENST00000551912 ERCC6L2Q5T890 1561 aa30.73■■■□□ 2.51
DDX54-209ENST00000551912 ARAP1Q96P48 1450 aa30.7■■■□□ 2.51
DDX54-209ENST00000551912 GOLGA3Q08378 1498 aa30.66■■■□□ 2.5
DDX54-209ENST00000551912 CYB5RLQ6IPT4 315 aa30.66■■■□□ 2.5
DDX54-209ENST00000551912 UGGT2Q9NYU1 1516 aa30.63■■■□□ 2.49
DDX54-209ENST00000551912 EHMT2Q96KQ7 1210 aa30.63■■■□□ 2.49
DDX54-209ENST00000551912 CARMIL2Q6F5E8 1435 aa30.61■■■□□ 2.49
DDX54-209ENST00000551912 UBTFP17480 764 aaKnown RBP30.58■■■□□ 2.49
DDX54-209ENST00000551912 DISP1Q96F81 1524 aa30.55■■■□□ 2.48
DDX54-209ENST00000551912 KIAA0556O60303 1618 aa30.49■■■□□ 2.47
DDX54-209ENST00000551912 TNIKQ9UKE5 1360 aa30.48■■■□□ 2.47
DDX54-209ENST00000551912 PTPRGP23470 1445 aa30.44■■■□□ 2.46
DDX54-209ENST00000551912 RANGAP1P46060 587 aaPredicted RBP30.42■■■□□ 2.46
DDX54-209ENST00000551912 TTBK1Q5TCY1 1321 aaPredicted RBP30.4■■■□□ 2.46
DDX54-209ENST00000551912 SAMD9Q5K651 1589 aa30.37■■■□□ 2.45
DDX54-209ENST00000551912 P3H3Q8IVL6 736 aa30.34■■■□□ 2.45
DDX54-209ENST00000551912 EFCAB5A4FU69 1503 aa30.31■■■□□ 2.44
DDX54-209ENST00000551912 UACAQ9BZF9 1416 aa30.24■■■□□ 2.43
DDX54-209ENST00000551912 ADCY10Q96PN6 1610 aa30.24■■■□□ 2.43
DDX54-209ENST00000551912 FHOD3Q2V2M9 1422 aa30.22■■■□□ 2.43
DDX54-209ENST00000551912 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
DDX54-209ENST00000551912 UHRF1BP1LA0JNW5 1464 aa30.19■■■□□ 2.42
DDX54-209ENST00000551912 ARHGAP35Q9NRY4 1499 aa30.19■■■□□ 2.42
DDX54-209ENST00000551912 PLB1Q6P1J6 1458 aa30.18■■■□□ 2.42
DDX54-209ENST00000551912 ABCC2Q92887 1545 aa30.17■■■□□ 2.42
DDX54-209ENST00000551912 NPM1P06748 294 aaKnown RBP eCLIP30.17■■■□□ 2.42
DDX54-209ENST00000551912 ABCA8O94911 1581 aa30.13■■■□□ 2.41
DDX54-209ENST00000551912 CLIP1P30622 1438 aa30.12■■■□□ 2.41
DDX54-209ENST00000551912 CEP162Q5TB80 1403 aa30.05■■■□□ 2.4
DDX54-209ENST00000551912 KDM5BQ9UGL1 1544 aa30.04■■■□□ 2.4
DDX54-209ENST00000551912 FMN1Q68DA7 1419 aa30.04■■■□□ 2.4
DDX54-209ENST00000551912 RAPGEF6Q8TEU7 1601 aa30.04■■■□□ 2.4
DDX54-209ENST00000551912 MAPKBP1O60336 1514 aa30.01■■■□□ 2.39
DDX54-209ENST00000551912 ZCCHC11Q5TAX3 1644 aaKnown RBP29.97■■■□□ 2.39
DDX54-209ENST00000551912 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
DDX54-209ENST00000551912 NUP153P49790 1475 aaKnown RBP29.93■■■□□ 2.38
DDX54-209ENST00000551912 ARID3CA6NKF2 412 aa29.92■■■□□ 2.38
DDX54-209ENST00000551912 ASXL2Q76L83 1435 aa29.9■■■□□ 2.38
DDX54-209ENST00000551912 ATP10BO94823 1461 aa29.9■■■□□ 2.38
DDX54-209ENST00000551912 ATP1B4Q9UN42 357 aaPredicted RBP29.86■■■□□ 2.37
DDX54-209ENST00000551912 HECW1Q76N89 1606 aa29.85■■■□□ 2.37
DDX54-209ENST00000551912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.84■■■□□ 2.37
DDX54-209ENST00000551912 HNRNPUL2Q1KMD3 747 aaKnown RBP29.84■■■□□ 2.37
DDX54-209ENST00000551912 ABCC10Q5T3U5 1492 aa29.84■■■□□ 2.37
DDX54-209ENST00000551912 CASKIN1Q8WXD9 1431 aa29.82■■■□□ 2.36
DDX54-209ENST00000551912 PCF11O94913 1555 aaKnown RBP29.81■■■□□ 2.36
DDX54-209ENST00000551912 WDR7Q9Y4E6 1490 aa29.8■■■□□ 2.36
DDX54-209ENST00000551912 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
DDX54-209ENST00000551912 FAM69CQ0P6D2 419 aa29.79■■■□□ 2.36
DDX54-209ENST00000551912 FYCO1Q9BQS8 1478 aa29.77■■■□□ 2.36
DDX54-209ENST00000551912 EPRSP07814 1512 aaKnown RBP29.76■■■□□ 2.36
DDX54-209ENST00000551912 KIF13AQ9H1H9 1805 aa29.76■■■□□ 2.35
DDX54-209ENST00000551912 CDK13Q14004 1512 aaKnown RBP29.75■■■□□ 2.35
DDX54-209ENST00000551912 PLEKHD1A6NEE1 506 aa29.7■■■□□ 2.35
DDX54-209ENST00000551912 KCNH8Q96L42 1107 aa29.69■■■□□ 2.34
DDX54-209ENST00000551912 GLI2P10070 1586 aa29.69■■■□□ 2.34
DDX54-209ENST00000551912 CCDC18Q5T9S5 1454 aa29.68■■■□□ 2.34
DDX54-209ENST00000551912 VPS8Q8N3P4 1428 aa29.67■■■□□ 2.34
DDX54-209ENST00000551912 LRRIQ1Q96JM4 1722 aa29.66■■■□□ 2.34
DDX54-209ENST00000551912 CDK11AQ9UQ88 783 aaPredicted RBP29.65■■■□□ 2.34
DDX54-209ENST00000551912 MAP3K4Q9Y6R4 1608 aa29.55■■■□□ 2.32
DDX54-209ENST00000551912 TROQ12816 1431 aaPredicted RBP29.53■■■□□ 2.32
DDX54-209ENST00000551912 TSPOAP1O95153 1857 aa29.53■■■□□ 2.32
DDX54-209ENST00000551912 CFAP43Q8NDM7 1665 aa29.52■■■□□ 2.32
DDX54-209ENST00000551912 CD109Q6YHK3 1445 aa29.51■■■□□ 2.31
DDX54-209ENST00000551912 ABCA9Q8IUA7 1624 aa29.5■■■□□ 2.31
DDX54-209ENST00000551912 MAGI3Q5TCQ9 1506 aa29.46■■■□□ 2.31
DDX54-209ENST00000551912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.45■■■□□ 2.3
DDX54-209ENST00000551912 PPRC1Q5VV67 1664 aaKnown RBP29.44■■■□□ 2.3
DDX54-209ENST00000551912 KIF14Q15058 1648 aa29.44■■■□□ 2.3
DDX54-209ENST00000551912 TEX14Q8IWB6 1497 aa29.42■■■□□ 2.3
DDX54-209ENST00000551912 MTUS2Q5JR59 1369 aa29.41■■■□□ 2.3
DDX54-209ENST00000551912 TIAM1Q13009 1591 aa29.4■■■□□ 2.3
DDX54-209ENST00000551912 TTC37Q6PGP7 1564 aa29.4■■■□□ 2.3
DDX54-209ENST00000551912 MAP3K1Q13233 1512 aa29.37■■■□□ 2.29
DDX54-209ENST00000551912 APLP2Q06481 763 aa29.36■■■□□ 2.29
DDX54-209ENST00000551912 EHBP1L1Q8N3D4 1523 aa29.35■■■□□ 2.29
DDX54-209ENST00000551912 PLCH2O75038 1416 aa29.29■■■□□ 2.28
DDX54-209ENST00000551912 LRRC9Q6ZRR7 1453 aa29.29■■■□□ 2.28
DDX54-209ENST00000551912 MYO5CQ9NQX4 1742 aa29.27■■■□□ 2.28
DDX54-209ENST00000551912 NEO1Q92859 1461 aa29.25■■■□□ 2.27
DDX54-209ENST00000551912 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
DDX54-209ENST00000551912 PHLDB1Q86UU1 1377 aa29.25■■■□□ 2.27
DDX54-209ENST00000551912 FANCAO15360 1455 aa29.24■■■□□ 2.27
DDX54-209ENST00000551912 KDM6BO15054 1643 aa29.24■■■□□ 2.27
DDX54-209ENST00000551912 ARAP3Q8WWN8 1544 aa29.24■■■□□ 2.27
DDX54-209ENST00000551912 CFAP74Q9C0B2 1584 aa29.21■■■□□ 2.27
DDX54-209ENST00000551912 SUPT6HQ7KZ85 1726 aaKnown RBP29.2■■■□□ 2.27
DDX54-209ENST00000551912 CCNB3Q8WWL7 1395 aa29.19■■■□□ 2.26
DDX54-209ENST00000551912 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
DDX54-209ENST00000551912 ARHGAP5Q13017 1502 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms