RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
SMARCD1-211ENST00000551497 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
SMARCD1-211ENST00000551497 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
SMARCD1-211ENST00000551497 KIAA0586Q9BVV6 1533 aa25.12■■□□□ 1.61
SMARCD1-211ENST00000551497 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
SMARCD1-211ENST00000551497 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
SMARCD1-211ENST00000551497 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
SMARCD1-211ENST00000551497 SHROOM2Q13796 1616 aa25.05■■□□□ 1.6
SMARCD1-211ENST00000551497 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
SMARCD1-211ENST00000551497 ARAP1Q96P48 1450 aa25■■□□□ 1.59
SMARCD1-211ENST00000551497 IQGAP2Q13576 1575 aa24.97■■□□□ 1.59
SMARCD1-211ENST00000551497 KIF21BO75037 1637 aa24.95■■□□□ 1.58
SMARCD1-211ENST00000551497 CTTNBP2Q8WZ74 1663 aa24.91■■□□□ 1.58
SMARCD1-211ENST00000551497 UBTFP17480 764 aaKnown RBP24.91■■□□□ 1.58
SMARCD1-211ENST00000551497 UGGT2Q9NYU1 1516 aa24.86■■□□□ 1.57
SMARCD1-211ENST00000551497 RANGAP1P46060 587 aaPredicted RBP24.86■■□□□ 1.57
SMARCD1-211ENST00000551497 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
SMARCD1-211ENST00000551497 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
SMARCD1-211ENST00000551497 DISP1Q96F81 1524 aa24.84■■□□□ 1.57
SMARCD1-211ENST00000551497 CARMIL2Q6F5E8 1435 aa24.84■■□□□ 1.57
SMARCD1-211ENST00000551497 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
SMARCD1-211ENST00000551497 TNIKQ9UKE5 1360 aa24.78■■□□□ 1.56
SMARCD1-211ENST00000551497 PTPRGP23470 1445 aa24.78■■□□□ 1.56
SMARCD1-211ENST00000551497 KIAA0556O60303 1618 aa24.73■■□□□ 1.55
SMARCD1-211ENST00000551497 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
SMARCD1-211ENST00000551497 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
SMARCD1-211ENST00000551497 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
SMARCD1-211ENST00000551497 UACAQ9BZF9 1416 aa24.59■■□□□ 1.53
SMARCD1-211ENST00000551497 ADCY10Q96PN6 1610 aa24.58■■□□□ 1.53
SMARCD1-211ENST00000551497 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
SMARCD1-211ENST00000551497 NPM1P06748 294 aaKnown RBP eCLIP24.56■■□□□ 1.52
SMARCD1-211ENST00000551497 PLB1Q6P1J6 1458 aa24.56■■□□□ 1.52
SMARCD1-211ENST00000551497 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
SMARCD1-211ENST00000551497 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
SMARCD1-211ENST00000551497 UHRF1BP1LA0JNW5 1464 aa24.51■■□□□ 1.51
SMARCD1-211ENST00000551497 ABCC2Q92887 1545 aa24.49■■□□□ 1.51
SMARCD1-211ENST00000551497 ABCA8O94911 1581 aa24.48■■□□□ 1.51
SMARCD1-211ENST00000551497 CLIP1P30622 1438 aa24.46■■□□□ 1.51
SMARCD1-211ENST00000551497 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
SMARCD1-211ENST00000551497 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
SMARCD1-211ENST00000551497 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
SMARCD1-211ENST00000551497 RAPGEF6Q8TEU7 1601 aa24.37■■□□□ 1.49
SMARCD1-211ENST00000551497 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
SMARCD1-211ENST00000551497 ATP10BO94823 1461 aa24.35■■□□□ 1.49
SMARCD1-211ENST00000551497 ZCCHC11Q5TAX3 1644 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-211ENST00000551497 MAPKBP1O60336 1514 aa24.35■■□□□ 1.49
SMARCD1-211ENST00000551497 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
SMARCD1-211ENST00000551497 ASXL2Q76L83 1435 aa24.34■■□□□ 1.49
SMARCD1-211ENST00000551497 NUP153P49790 1475 aaKnown RBP24.32■■□□□ 1.48
SMARCD1-211ENST00000551497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
SMARCD1-211ENST00000551497 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
SMARCD1-211ENST00000551497 FAM69CQ0P6D2 419 aa24.3■■□□□ 1.48
SMARCD1-211ENST00000551497 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
SMARCD1-211ENST00000551497 KCNH8Q96L42 1107 aa24.25■■□□□ 1.47
SMARCD1-211ENST00000551497 CASKIN1Q8WXD9 1431 aa24.21■■□□□ 1.47
SMARCD1-211ENST00000551497 KIF13AQ9H1H9 1805 aa24.21■■□□□ 1.47
SMARCD1-211ENST00000551497 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
SMARCD1-211ENST00000551497 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
SMARCD1-211ENST00000551497 CDK13Q14004 1512 aaKnown RBP24.19■■□□□ 1.46
SMARCD1-211ENST00000551497 PLEKHD1A6NEE1 506 aa24.18■■□□□ 1.46
SMARCD1-211ENST00000551497 EPRSP07814 1512 aaKnown RBP24.18■■□□□ 1.46
SMARCD1-211ENST00000551497 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
SMARCD1-211ENST00000551497 HECW1Q76N89 1606 aa24.17■■□□□ 1.46
SMARCD1-211ENST00000551497 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
SMARCD1-211ENST00000551497 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
SMARCD1-211ENST00000551497 GLI2P10070 1586 aa24.1■■□□□ 1.45
SMARCD1-211ENST00000551497 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.45
SMARCD1-211ENST00000551497 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
SMARCD1-211ENST00000551497 TSPOAP1O95153 1857 aa24.06■■□□□ 1.44
SMARCD1-211ENST00000551497 CCDC18Q5T9S5 1454 aa24.03■■□□□ 1.44
SMARCD1-211ENST00000551497 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
SMARCD1-211ENST00000551497 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
SMARCD1-211ENST00000551497 MAP3K4Q9Y6R4 1608 aa23.99■■□□□ 1.43
SMARCD1-211ENST00000551497 TROQ12816 1431 aaPredicted RBP23.98■■□□□ 1.43
SMARCD1-211ENST00000551497 MAGI3Q5TCQ9 1506 aa23.97■■□□□ 1.43
SMARCD1-211ENST00000551497 PPRC1Q5VV67 1664 aaKnown RBP23.95■■□□□ 1.42
SMARCD1-211ENST00000551497 ABCA9Q8IUA7 1624 aa23.94■■□□□ 1.42
SMARCD1-211ENST00000551497 CFAP43Q8NDM7 1665 aa23.93■■□□□ 1.42
SMARCD1-211ENST00000551497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.93■■□□□ 1.42
SMARCD1-211ENST00000551497 KIF14Q15058 1648 aa23.91■■□□□ 1.42
SMARCD1-211ENST00000551497 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
SMARCD1-211ENST00000551497 TTC37Q6PGP7 1564 aa23.88■■□□□ 1.41
SMARCD1-211ENST00000551497 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
SMARCD1-211ENST00000551497 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
SMARCD1-211ENST00000551497 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
SMARCD1-211ENST00000551497 APLP2Q06481 763 aa23.84■■□□□ 1.41
SMARCD1-211ENST00000551497 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
SMARCD1-211ENST00000551497 PLCH2O75038 1416 aa23.81■■□□□ 1.4
SMARCD1-211ENST00000551497 MAP3K1Q13233 1512 aa23.79■■□□□ 1.4
SMARCD1-211ENST00000551497 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
SMARCD1-211ENST00000551497 EHBP1L1Q8N3D4 1523 aa23.76■■□□□ 1.39
SMARCD1-211ENST00000551497 EFCAB2Q5VUJ9 269 aa23.76■■□□□ 1.39
SMARCD1-211ENST00000551497 FANCAO15360 1455 aa23.75■■□□□ 1.39
SMARCD1-211ENST00000551497 KDM6BO15054 1643 aa23.75■■□□□ 1.39
SMARCD1-211ENST00000551497 NEO1Q92859 1461 aa23.74■■□□□ 1.39
SMARCD1-211ENST00000551497 MYO5CQ9NQX4 1742 aa23.73■■□□□ 1.39
SMARCD1-211ENST00000551497 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
SMARCD1-211ENST00000551497 PHLDB1Q86UU1 1377 aa23.72■■□□□ 1.39
SMARCD1-211ENST00000551497 CCNB3Q8WWL7 1395 aa23.72■■□□□ 1.39
SMARCD1-211ENST00000551497 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms