RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 WDR62O43379 1518 aa31.79■■■□□ 2.68
NPAS3-210ENST00000551492 ANP32EQ9BTT0 268 aa31.76■■■□□ 2.68
NPAS3-210ENST00000551492 KIF21BO75037 1637 aa31.76■■■□□ 2.67
NPAS3-210ENST00000551492 CLIP1P30622 1438 aa31.72■■■□□ 2.67
NPAS3-210ENST00000551492 TRIM26Q12899 539 aaPredicted RBP31.71■■■□□ 2.67
NPAS3-210ENST00000551492 ATP1B4Q9UN42 357 aaPredicted RBP31.67■■■□□ 2.66
NPAS3-210ENST00000551492 WDR97A6NE52 1622 aa31.65■■■□□ 2.66
NPAS3-210ENST00000551492 IFT140Q96RY7 1462 aa31.62■■■□□ 2.65
NPAS3-210ENST00000551492 ABCA5Q8WWZ7 1642 aa31.61■■■□□ 2.65
NPAS3-210ENST00000551492 CHMP7Q8WUX9 453 aaPredicted RBP31.57■■■□□ 2.64
NPAS3-210ENST00000551492 ARID3CA6NKF2 412 aa31.53■■■□□ 2.64
NPAS3-210ENST00000551492 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
NPAS3-210ENST00000551492 ERICH3Q5RHP9 1530 aa31.52■■■□□ 2.64
NPAS3-210ENST00000551492 EIF4G3O43432 1585 aaKnown RBP31.51■■■□□ 2.64
NPAS3-210ENST00000551492 GRIN2BQ13224 1484 aa31.47■■■□□ 2.63
NPAS3-210ENST00000551492 PBRM1Q86U86 1689 aa31.44■■■□□ 2.62
NPAS3-210ENST00000551492 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
NPAS3-210ENST00000551492 ARHGAP35Q9NRY4 1499 aa31.38■■■□□ 2.61
NPAS3-210ENST00000551492 FHOD3Q2V2M9 1422 aa31.37■■■□□ 2.61
NPAS3-210ENST00000551492 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
NPAS3-210ENST00000551492 CUL7Q14999 1698 aa31.3■■■□□ 2.6
NPAS3-210ENST00000551492 KANK4Q5T7N3 995 aaPredicted RBP31.3■■■□□ 2.6
NPAS3-210ENST00000551492 ADAMTS12P58397 1594 aa31.26■■■□□ 2.59
NPAS3-210ENST00000551492 VPS8Q8N3P4 1428 aa31.23■■■□□ 2.59
NPAS3-210ENST00000551492 YTHDC1Q96MU7 727 aaKnown RBP31.21■■■□□ 2.59
NPAS3-210ENST00000551492 DIEXFQ68CQ4 756 aaKnown RBP31.2■■■□□ 2.58
NPAS3-210ENST00000551492 GRIN2AQ12879 1464 aa31.16■■■□□ 2.58
NPAS3-210ENST00000551492 SYNJ2O15056 1496 aa31.09■■■□□ 2.57
NPAS3-210ENST00000551492 CTTNBP2Q8WZ74 1663 aa31.08■■■□□ 2.57
NPAS3-210ENST00000551492 JPH4Q96JJ6 628 aa31.07■■■□□ 2.56
NPAS3-210ENST00000551492 MAGI1Q96QZ7 1491 aaPredicted RBP31.05■■■□□ 2.56
NPAS3-210ENST00000551492 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
NPAS3-210ENST00000551492 ANO8Q9HCE9 1232 aaPredicted RBP31.02■■■□□ 2.56
NPAS3-210ENST00000551492 HNRNPUL2Q1KMD3 747 aaKnown RBP31■■■□□ 2.55
NPAS3-210ENST00000551492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.99■■■□□ 2.55
NPAS3-210ENST00000551492 IQGAP2Q13576 1575 aa30.97■■■□□ 2.55
NPAS3-210ENST00000551492 ITGAEP38570 1179 aa30.97■■■□□ 2.55
NPAS3-210ENST00000551492 TSHZ2Q9NRE2 1034 aa30.94■■■□□ 2.54
NPAS3-210ENST00000551492 CHD1O14646 1710 aa30.91■■■□□ 2.54
NPAS3-210ENST00000551492 KIAA0586Q9BVV6 1533 aa30.9■■■□□ 2.54
NPAS3-210ENST00000551492 PCF11O94913 1555 aaKnown RBP30.86■■■□□ 2.53
NPAS3-210ENST00000551492 DISP1Q96F81 1524 aa30.81■■■□□ 2.52
NPAS3-210ENST00000551492 NUP160Q12769 1436 aa30.8■■■□□ 2.52
NPAS3-210ENST00000551492 PRG4Q92954 1404 aaPredicted RBP30.77■■■□□ 2.52
NPAS3-210ENST00000551492 SAMD9Q5K651 1589 aa30.74■■■□□ 2.51
NPAS3-210ENST00000551492 ERCC6L2Q5T890 1561 aa30.74■■■□□ 2.51
NPAS3-210ENST00000551492 PLB1Q6P1J6 1458 aa30.72■■■□□ 2.51
NPAS3-210ENST00000551492 EFCAB5A4FU69 1503 aa30.71■■■□□ 2.51
NPAS3-210ENST00000551492 FMN1Q68DA7 1419 aa30.7■■■□□ 2.51
NPAS3-210ENST00000551492 CDK13Q14004 1512 aaKnown RBP30.68■■■□□ 2.5
NPAS3-210ENST00000551492 FAM50AQ14320 339 aaKnown RBP30.67■■■□□ 2.5
NPAS3-210ENST00000551492 UGGT2Q9NYU1 1516 aa30.66■■■□□ 2.5
NPAS3-210ENST00000551492 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
NPAS3-210ENST00000551492 KIAA0556O60303 1618 aa30.64■■■□□ 2.5
NPAS3-210ENST00000551492 MTUS2Q5JR59 1369 aa30.61■■■□□ 2.49
NPAS3-210ENST00000551492 LRRIQ1Q96JM4 1722 aa30.6■■■□□ 2.49
NPAS3-210ENST00000551492 TIAM1Q13009 1591 aa30.6■■■□□ 2.49
NPAS3-210ENST00000551492 PHLDB1Q86UU1 1377 aa30.59■■■□□ 2.49
NPAS3-210ENST00000551492 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
NPAS3-210ENST00000551492 CARMIL2Q6F5E8 1435 aa30.57■■■□□ 2.48
NPAS3-210ENST00000551492 LRRC9Q6ZRR7 1453 aa30.57■■■□□ 2.48
NPAS3-210ENST00000551492 SUPT16HQ9Y5B9 1047 aaKnown RBP30.56■■■□□ 2.48
NPAS3-210ENST00000551492 FYCO1Q9BQS8 1478 aa30.54■■■□□ 2.48
NPAS3-210ENST00000551492 PTPRGP23470 1445 aa30.53■■■□□ 2.48
NPAS3-210ENST00000551492 MAGI3Q5TCQ9 1506 aa30.49■■■□□ 2.47
NPAS3-210ENST00000551492 EPRSP07814 1512 aaKnown RBP30.46■■■□□ 2.47
NPAS3-210ENST00000551492 NUP153P49790 1475 aaKnown RBP30.46■■■□□ 2.47
NPAS3-210ENST00000551492 KCNH8Q96L42 1107 aa30.46■■■□□ 2.47
NPAS3-210ENST00000551492 CCDC136Q96JN2 1154 aa30.44■■■□□ 2.46
NPAS3-210ENST00000551492 SALL2Q9Y467 1007 aaPredicted RBP30.41■■■□□ 2.46
NPAS3-210ENST00000551492 ZNF777Q9ULD5 760 aaPredicted RBP30.4■■■□□ 2.46
NPAS3-210ENST00000551492 CCER1Q8TC90 406 aaPredicted RBP30.39■■■□□ 2.46
NPAS3-210ENST00000551492 ZNF644Q9H582 1327 aaPredicted RBP30.37■■■□□ 2.45
NPAS3-210ENST00000551492 CHIC2Q9UKJ5 165 aa30.37■■■□□ 2.45
NPAS3-210ENST00000551492 SLC24A1O60721 1099 aa30.36■■■□□ 2.45
NPAS3-210ENST00000551492 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
NPAS3-210ENST00000551492 MIER1Q8N108 512 aa30.34■■■□□ 2.45
NPAS3-210ENST00000551492 RAPGEF6Q8TEU7 1601 aa30.33■■■□□ 2.45
NPAS3-210ENST00000551492 CFAP43Q8NDM7 1665 aa30.3■■■□□ 2.44
NPAS3-210ENST00000551492 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
NPAS3-210ENST00000551492 NCOA2Q15596 1464 aa30.29■■■□□ 2.44
NPAS3-210ENST00000551492 HECW1Q76N89 1606 aa30.29■■■□□ 2.44
NPAS3-210ENST00000551492 CYB5RLQ6IPT4 315 aa30.29■■■□□ 2.44
NPAS3-210ENST00000551492 PLEKHD1A6NEE1 506 aa30.28■■■□□ 2.44
NPAS3-210ENST00000551492 UBE2Q2Q8WVN8 375 aa30.27■■■□□ 2.44
NPAS3-210ENST00000551492 ATP10BO94823 1461 aa30.26■■■□□ 2.43
NPAS3-210ENST00000551492 CDK11AQ9UQ88 783 aaPredicted RBP30.22■■■□□ 2.43
NPAS3-210ENST00000551492 UACAQ9BZF9 1416 aa30.19■■■□□ 2.42
NPAS3-210ENST00000551492 SHROOM2Q13796 1616 aa30.19■■■□□ 2.42
NPAS3-210ENST00000551492 EIF5BO60841 1220 aaKnown RBP30.19■■■□□ 2.42
NPAS3-210ENST00000551492 MAP3K1Q13233 1512 aa30.19■■■□□ 2.42
NPAS3-210ENST00000551492 RRBP1Q9P2E9 1410 aaKnown RBP30.17■■■□□ 2.42
NPAS3-210ENST00000551492 RRP7BPQ9NSQ0 103 aa30.16■■■□□ 2.42
NPAS3-210ENST00000551492 CCDC18Q5T9S5 1454 aa30.15■■■□□ 2.42
NPAS3-210ENST00000551492 ABCA8O94911 1581 aa30.15■■■□□ 2.42
NPAS3-210ENST00000551492 FGD6Q6ZV73 1430 aa30.12■■■□□ 2.41
NPAS3-210ENST00000551492 KIF14Q15058 1648 aa30.11■■■□□ 2.41
NPAS3-210ENST00000551492 CFDP1Q9UEE9 299 aaPredicted RBP30.1■■■□□ 2.41
NPAS3-210ENST00000551492 PTPRKQ15262 1439 aa30.07■■■□□ 2.4
NPAS3-210ENST00000551492 MYOM3Q5VTT5 1437 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms