RNA–Protein interactions for RNA: ENST00000550522.5

LARP4-216, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 4

Gene LARP4, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-216ENST00000550522 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
LARP4-216ENST00000550522 CD44P16070 742 aaKnown RBP10.88□□□□□ -0.67
LARP4-216ENST00000550522 HMGXB3Q12766 1538 aa10.88□□□□□ -0.67
LARP4-216ENST00000550522 WIZO95785 1651 aa10.85□□□□□ -0.67
LARP4-216ENST00000550522 LHX8Q68G74 356 aa10.83□□□□□ -0.68
LARP4-216ENST00000550522 BAZ1BQ9UIG0 1483 aaKnown RBP10.79□□□□□ -0.68
LARP4-216ENST00000550522 POTEIP0CG38 1075 aa10.77□□□□□ -0.69
LARP4-216ENST00000550522 TOP2AP11388 1531 aaKnown RBP10.76□□□□□ -0.69
LARP4-216ENST00000550522 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
LARP4-216ENST00000550522 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
LARP4-216ENST00000550522 ZRANB1Q9UGI0 708 aa10.74□□□□□ -0.69
LARP4-216ENST00000550522 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
LARP4-216ENST00000550522 DCBLD2Q96PD2 775 aa10.7□□□□□ -0.7
LARP4-216ENST00000550522 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
LARP4-216ENST00000550522 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
LARP4-216ENST00000550522 CLCN6P51797 869 aa10.61□□□□□ -0.71
LARP4-216ENST00000550522 GALR2O43603 387 aaPredicted RBP10.6□□□□□ -0.71
LARP4-216ENST00000550522 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
LARP4-216ENST00000550522 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
LARP4-216ENST00000550522 LAMC3Q9Y6N6 1575 aa10.57□□□□□ -0.72
LARP4-216ENST00000550522 CFTRP13569 1480 aa10.57□□□□□ -0.72
LARP4-216ENST00000550522 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
LARP4-216ENST00000550522 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
LARP4-216ENST00000550522 NESP48681 1621 aa10.55□□□□□ -0.72
LARP4-216ENST00000550522 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
LARP4-216ENST00000550522 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
LARP4-216ENST00000550522 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
LARP4-216ENST00000550522 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
LARP4-216ENST00000550522 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
LARP4-216ENST00000550522 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
LARP4-216ENST00000550522 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
LARP4-216ENST00000550522 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
LARP4-216ENST00000550522 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
LARP4-216ENST00000550522 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
LARP4-216ENST00000550522 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
LARP4-216ENST00000550522 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
LARP4-216ENST00000550522 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
LARP4-216ENST00000550522 PLSCR2Q9NRY7 297 aa10.38□□□□□ -0.75
LARP4-216ENST00000550522 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
LARP4-216ENST00000550522 WDR62O43379 1518 aa10.37□□□□□ -0.75
LARP4-216ENST00000550522 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
LARP4-216ENST00000550522 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
LARP4-216ENST00000550522 MIER1Q8N108 512 aa10.34□□□□□ -0.75
LARP4-216ENST00000550522 ATMINO43313 823 aaPredicted RBP10.31□□□□□ -0.76
LARP4-216ENST00000550522 CUX2O14529 1486 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 CUX1P39880 1505 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 TOPBP1Q92547 1522 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 PROM2Q8N271 834 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 DNMBPQ6XZF7 1577 aa10.3□□□□□ -0.76
LARP4-216ENST00000550522 ASTLQ6HA08 431 aaPredicted RBP10.28□□□□□ -0.76
LARP4-216ENST00000550522 CCDC61Q9Y6R9 512 aa10.27□□□□□ -0.77
LARP4-216ENST00000550522 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
LARP4-216ENST00000550522 ATN1P54259 1190 aaPredicted RBP10.26□□□□□ -0.77
LARP4-216ENST00000550522 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 POTEJP0CG39 1038 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 C7P10643 843 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 KIF12Q96FN5 646 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 SYNJ1O43426 1573 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
LARP4-216ENST00000550522 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
LARP4-216ENST00000550522 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
LARP4-216ENST00000550522 MAP3K13O43283 966 aa10.23□□□□□ -0.77
LARP4-216ENST00000550522 RASEFQ8IZ41 740 aa10.23□□□□□ -0.77
LARP4-216ENST00000550522 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
LARP4-216ENST00000550522 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
LARP4-216ENST00000550522 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
LARP4-216ENST00000550522 POTEMA6NI47 508 aa10.21□□□□□ -0.77
LARP4-216ENST00000550522 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
LARP4-216ENST00000550522 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
LARP4-216ENST00000550522 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
LARP4-216ENST00000550522 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
LARP4-216ENST00000550522 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
LARP4-216ENST00000550522 FAM163AQ96GL9 167 aaPredicted RBP10.16□□□□□ -0.78
LARP4-216ENST00000550522 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
LARP4-216ENST00000550522 ABCA10Q8WWZ4 1543 aa10.14□□□□□ -0.79
LARP4-216ENST00000550522 SOGA1O94964 1423 aa10.14□□□□□ -0.79
LARP4-216ENST00000550522 ZNF608Q9ULD9 1512 aaPredicted RBP10.13□□□□□ -0.79
LARP4-216ENST00000550522 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
LARP4-216ENST00000550522 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
LARP4-216ENST00000550522 SCUBE2Q9NQ36 999 aa10.11□□□□□ -0.79
LARP4-216ENST00000550522 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
LARP4-216ENST00000550522 SEC24BO95487 1268 aa10.1□□□□□ -0.79
LARP4-216ENST00000550522 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
LARP4-216ENST00000550522 TIE1P35590 1138 aa10.09□□□□□ -0.79
LARP4-216ENST00000550522 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
LARP4-216ENST00000550522 TTLL13PA6NNM8 815 aa10.08□□□□□ -0.8
LARP4-216ENST00000550522 FKBP8Q14318 412 aa10.08□□□□□ -0.8
LARP4-216ENST00000550522 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
LARP4-216ENST00000550522 AQRO60306 1485 aaKnown RBP eCLIP10.06□□□□□ -0.84e-8■■■■■ 32.5
LARP4-216ENST00000550522 TDRD9Q8NDG6 1382 aaKnown RBP10.06□□□□□ -0.8
LARP4-216ENST00000550522 NUBP1P53384 320 aa10.05□□□□□ -0.8
LARP4-216ENST00000550522 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
LARP4-216ENST00000550522 GAPVD1Q14C86 1478 aa10.04□□□□□ -0.8
LARP4-216ENST00000550522 GRIN2BQ13224 1484 aa10.03□□□□□ -0.8
LARP4-216ENST00000550522 PBRM1Q86U86 1689 aa10.02□□□□□ -0.8
LARP4-216ENST00000550522 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.8
LARP4-216ENST00000550522 IFNL1Q8IU54 200 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms