RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 KIAA0586Q9BVV6 1533 aa29.24■■■□□ 2.27
CDK4-207ENST00000550419 SHROOM2Q13796 1616 aa29.23■■■□□ 2.27
CDK4-207ENST00000550419 CSRNP3Q8WYN3 585 aa29.22■■■□□ 2.27
CDK4-207ENST00000550419 JPH4Q96JJ6 628 aa29.14■■■□□ 2.26
CDK4-207ENST00000550419 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
CDK4-207ENST00000550419 PRG4Q92954 1404 aaPredicted RBP29.07■■■□□ 2.24
CDK4-207ENST00000550419 IQGAP2Q13576 1575 aa29.05■■■□□ 2.24
CDK4-207ENST00000550419 ERCC6L2Q5T890 1561 aa29.04■■■□□ 2.24
CDK4-207ENST00000550419 CYB5RLQ6IPT4 315 aa29.03■■■□□ 2.24
CDK4-207ENST00000550419 FAM9AQ8IZU1 332 aaPredicted RBP29.02■■■□□ 2.24
CDK4-207ENST00000550419 KIF21BO75037 1637 aa28.97■■■□□ 2.23
CDK4-207ENST00000550419 CTTNBP2Q8WZ74 1663 aa28.96■■■□□ 2.23
CDK4-207ENST00000550419 UGGT2Q9NYU1 1516 aa28.94■■■□□ 2.22
CDK4-207ENST00000550419 CARMIL2Q6F5E8 1435 aa28.91■■■□□ 2.22
CDK4-207ENST00000550419 DISP1Q96F81 1524 aa28.84■■■□□ 2.21
CDK4-207ENST00000550419 GOLGA3Q08378 1498 aa28.79■■■□□ 2.2
CDK4-207ENST00000550419 TNIKQ9UKE5 1360 aa28.79■■■□□ 2.2
CDK4-207ENST00000550419 KIAA0556O60303 1618 aa28.76■■■□□ 2.2
CDK4-207ENST00000550419 PTPRGP23470 1445 aa28.75■■■□□ 2.19
CDK4-207ENST00000550419 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
CDK4-207ENST00000550419 SAMD9Q5K651 1589 aa28.65■■■□□ 2.18
CDK4-207ENST00000550419 ADCY10Q96PN6 1610 aa28.6■■■□□ 2.17
CDK4-207ENST00000550419 UHRF1BP1LA0JNW5 1464 aa28.59■■■□□ 2.17
CDK4-207ENST00000550419 UACAQ9BZF9 1416 aa28.57■■■□□ 2.16
CDK4-207ENST00000550419 EFCAB5A4FU69 1503 aa28.57■■■□□ 2.16
CDK4-207ENST00000550419 EHMT2Q96KQ7 1210 aa28.55■■■□□ 2.16
CDK4-207ENST00000550419 TTBK1Q5TCY1 1321 aaPredicted RBP28.54■■■□□ 2.16
CDK4-207ENST00000550419 ABCC2Q92887 1545 aa28.53■■■□□ 2.16
CDK4-207ENST00000550419 NPM1P06748 294 aaKnown RBP eCLIP28.51■■■□□ 2.15
CDK4-207ENST00000550419 P3H3Q8IVL6 736 aa28.48■■■□□ 2.15
CDK4-207ENST00000550419 ABCA8O94911 1581 aa28.46■■■□□ 2.15
CDK4-207ENST00000550419 MAPKBP1O60336 1514 aa28.46■■■□□ 2.15
CDK4-207ENST00000550419 PLB1Q6P1J6 1458 aa28.46■■■□□ 2.15
CDK4-207ENST00000550419 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.14
CDK4-207ENST00000550419 KDM5BQ9UGL1 1544 aa28.43■■■□□ 2.14
CDK4-207ENST00000550419 FHOD3Q2V2M9 1422 aa28.42■■■□□ 2.14
CDK4-207ENST00000550419 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
CDK4-207ENST00000550419 TRHP20396 242 aaPredicted RBP28.36■■■□□ 2.13
CDK4-207ENST00000550419 RAPGEF6Q8TEU7 1601 aa28.32■■■□□ 2.12
CDK4-207ENST00000550419 ZCCHC11Q5TAX3 1644 aaKnown RBP28.31■■■□□ 2.12
CDK4-207ENST00000550419 FMN1Q68DA7 1419 aa28.3■■■□□ 2.12
CDK4-207ENST00000550419 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
CDK4-207ENST00000550419 CLIP1P30622 1438 aa28.27■■■□□ 2.12
CDK4-207ENST00000550419 ASXL2Q76L83 1435 aa28.27■■■□□ 2.12
CDK4-207ENST00000550419 NUP153P49790 1475 aaKnown RBP28.23■■■□□ 2.11
CDK4-207ENST00000550419 ATP10BO94823 1461 aa28.22■■■□□ 2.11
CDK4-207ENST00000550419 DIP2BQ9P265 1576 aa28.22■■■□□ 2.11
CDK4-207ENST00000550419 LOC105371045A0A1W2PR82 267 aa28.2■■■□□ 2.1
CDK4-207ENST00000550419 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.1
CDK4-207ENST00000550419 WDR7Q9Y4E6 1490 aa28.17■■■□□ 2.1
CDK4-207ENST00000550419 FAM69CQ0P6D2 419 aa28.17■■■□□ 2.1
CDK4-207ENST00000550419 CEP162Q5TB80 1403 aa28.17■■■□□ 2.1
CDK4-207ENST00000550419 GLI2P10070 1586 aa28.15■■■□□ 2.1
CDK4-207ENST00000550419 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
CDK4-207ENST00000550419 HECW1Q76N89 1606 aa28.11■■■□□ 2.09
CDK4-207ENST00000550419 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
CDK4-207ENST00000550419 ARID3CA6NKF2 412 aa28.08■■■□□ 2.09
CDK4-207ENST00000550419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.03■■■□□ 2.08
CDK4-207ENST00000550419 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
CDK4-207ENST00000550419 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
CDK4-207ENST00000550419 PCF11O94913 1555 aaKnown RBP28.02■■■□□ 2.08
CDK4-207ENST00000550419 CDK13Q14004 1512 aaKnown RBP27.99■■■□□ 2.07
CDK4-207ENST00000550419 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
CDK4-207ENST00000550419 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
CDK4-207ENST00000550419 MAP3K4Q9Y6R4 1608 aa27.98■■■□□ 2.07
CDK4-207ENST00000550419 CCDC18Q5T9S5 1454 aa27.96■■■□□ 2.07
CDK4-207ENST00000550419 KCNH8Q96L42 1107 aa27.96■■■□□ 2.07
CDK4-207ENST00000550419 CDK11AQ9UQ88 783 aaPredicted RBP27.94■■■□□ 2.06
CDK4-207ENST00000550419 CFAP43Q8NDM7 1665 aa27.93■■■□□ 2.06
CDK4-207ENST00000550419 LRRIQ1Q96JM4 1722 aa27.92■■■□□ 2.06
CDK4-207ENST00000550419 ABCA9Q8IUA7 1624 aa27.9■■■□□ 2.06
CDK4-207ENST00000550419 CD109Q6YHK3 1445 aa27.89■■■□□ 2.06
CDK4-207ENST00000550419 PPRC1Q5VV67 1664 aaKnown RBP27.88■■■□□ 2.05
CDK4-207ENST00000550419 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
CDK4-207ENST00000550419 TEX14Q8IWB6 1497 aa27.87■■■□□ 2.05
CDK4-207ENST00000550419 TSPOAP1O95153 1857 aa27.86■■■□□ 2.05
CDK4-207ENST00000550419 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
CDK4-207ENST00000550419 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
CDK4-207ENST00000550419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.79■■■□□ 2.042e-6■■■■□ 26.7
CDK4-207ENST00000550419 KIF14Q15058 1648 aa27.74■■■□□ 2.03
CDK4-207ENST00000550419 TTC37Q6PGP7 1564 aa27.73■■■□□ 2.03
CDK4-207ENST00000550419 PHLDB1Q86UU1 1377 aa27.72■■■□□ 2.03
CDK4-207ENST00000550419 KDM6BO15054 1643 aa27.71■■■□□ 2.03
CDK4-207ENST00000550419 NEO1Q92859 1461 aa27.69■■■□□ 2.02
CDK4-207ENST00000550419 PLCH2O75038 1416 aa27.67■■■□□ 2.02
CDK4-207ENST00000550419 MAP3K1Q13233 1512 aa27.66■■■□□ 2.02
CDK4-207ENST00000550419 ARAP3Q8WWN8 1544 aa27.66■■■□□ 2.02
CDK4-207ENST00000550419 MTUS2Q5JR59 1369 aa27.64■■■□□ 2.02
CDK4-207ENST00000550419 TIAM1Q13009 1591 aa27.64■■■□□ 2.01
CDK4-207ENST00000550419 COL17A1Q9UMD9 1497 aaPredicted RBP27.63■■■□□ 2.01
CDK4-207ENST00000550419 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
CDK4-207ENST00000550419 CFAP74Q9C0B2 1584 aa27.61■■■□□ 2.01
CDK4-207ENST00000550419 FANCAO15360 1455 aa27.61■■■□□ 2.01
CDK4-207ENST00000550419 MYO5CQ9NQX4 1742 aa27.6■■■□□ 2.01
CDK4-207ENST00000550419 AKNAQ7Z591 1439 aa27.55■■■□□ 2
CDK4-207ENST00000550419 EFCAB2Q5VUJ9 269 aa27.54■■■□□ 2
CDK4-207ENST00000550419 LRRC9Q6ZRR7 1453 aa27.53■■■□□ 2
CDK4-207ENST00000550419 PREX2Q70Z35 1606 aa27.52■■■□□ 2
CDK4-207ENST00000550419 ARHGAP5Q13017 1502 aa27.5■■□□□ 1.99
CDK4-207ENST00000550419 GPATCH8Q9UKJ3 1502 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms