RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 KIAA0586Q9BVV6 1533 aa28.36■■■□□ 2.13
BRF1-217ENST00000550375 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
BRF1-217ENST00000550375 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
BRF1-217ENST00000550375 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
BRF1-217ENST00000550375 CTTNBP2Q8WZ74 1663 aa28.33■■■□□ 2.12
BRF1-217ENST00000550375 SHROOM2Q13796 1616 aa28.3■■■□□ 2.12
BRF1-217ENST00000550375 ARHGEF11O15085 1522 aa28.3■■■□□ 2.12
BRF1-217ENST00000550375 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
BRF1-217ENST00000550375 JPH4Q96JJ6 628 aa28.27■■■□□ 2.12
BRF1-217ENST00000550375 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
BRF1-217ENST00000550375 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
BRF1-217ENST00000550375 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
BRF1-217ENST00000550375 UBTFP17480 764 aaKnown RBP28.19■■■□□ 2.1
BRF1-217ENST00000550375 UGGT2Q9NYU1 1516 aa28.11■■■□□ 2.09
BRF1-217ENST00000550375 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
BRF1-217ENST00000550375 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
BRF1-217ENST00000550375 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
BRF1-217ENST00000550375 CARMIL2Q6F5E8 1435 aa28.06■■■□□ 2.08
BRF1-217ENST00000550375 DISP1Q96F81 1524 aa28.05■■■□□ 2.08
BRF1-217ENST00000550375 KIAA0556O60303 1618 aa28.01■■■□□ 2.07
BRF1-217ENST00000550375 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
BRF1-217ENST00000550375 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
BRF1-217ENST00000550375 P3H3Q8IVL6 736 aa27.95■■■□□ 2.06
BRF1-217ENST00000550375 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
BRF1-217ENST00000550375 SAMD9Q5K651 1589 aa27.93■■■□□ 2.06
BRF1-217ENST00000550375 PTPRGP23470 1445 aa27.91■■■□□ 2.06
BRF1-217ENST00000550375 EFCAB5A4FU69 1503 aa27.86■■■□□ 2.05
BRF1-217ENST00000550375 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
BRF1-217ENST00000550375 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
BRF1-217ENST00000550375 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
BRF1-217ENST00000550375 CLIP1P30622 1438 aa27.75■■■□□ 2.03
BRF1-217ENST00000550375 ADCY10Q96PN6 1610 aa27.74■■■□□ 2.03
BRF1-217ENST00000550375 UACAQ9BZF9 1416 aa27.72■■■□□ 2.03
BRF1-217ENST00000550375 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
BRF1-217ENST00000550375 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
BRF1-217ENST00000550375 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
BRF1-217ENST00000550375 ABCA8O94911 1581 aa27.67■■■□□ 2.02
BRF1-217ENST00000550375 UHRF1BP1LA0JNW5 1464 aa27.65■■■□□ 2.02
BRF1-217ENST00000550375 RAPGEF6Q8TEU7 1601 aa27.63■■■□□ 2.01
BRF1-217ENST00000550375 NPM1P06748 294 aaKnown RBP eCLIP27.62■■■□□ 2.01
BRF1-217ENST00000550375 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
BRF1-217ENST00000550375 ARID3CA6NKF2 412 aa27.57■■■□□ 2
BRF1-217ENST00000550375 ZCCHC11Q5TAX3 1644 aaKnown RBP27.54■■■□□ 2
BRF1-217ENST00000550375 KDM5BQ9UGL1 1544 aa27.52■■■□□ 2
BRF1-217ENST00000550375 ATP1B4Q9UN42 357 aaPredicted RBP27.52■■■□□ 2
BRF1-217ENST00000550375 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
BRF1-217ENST00000550375 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
BRF1-217ENST00000550375 HECW1Q76N89 1606 aa27.46■■□□□ 1.99
BRF1-217ENST00000550375 ATP10BO94823 1461 aa27.45■■□□□ 1.99
BRF1-217ENST00000550375 MAPKBP1O60336 1514 aa27.44■■□□□ 1.98
BRF1-217ENST00000550375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.44■■□□□ 1.98
BRF1-217ENST00000550375 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
BRF1-217ENST00000550375 CASKIN1Q8WXD9 1431 aa27.42■■□□□ 1.98
BRF1-217ENST00000550375 ASXL2Q76L83 1435 aa27.4■■□□□ 1.98
BRF1-217ENST00000550375 LRRIQ1Q96JM4 1722 aa27.39■■□□□ 1.98
BRF1-217ENST00000550375 CDK13Q14004 1512 aaKnown RBP27.38■■□□□ 1.97
BRF1-217ENST00000550375 FYCO1Q9BQS8 1478 aa27.37■■□□□ 1.97
BRF1-217ENST00000550375 EPRSP07814 1512 aaKnown RBP27.37■■□□□ 1.97
BRF1-217ENST00000550375 VPS8Q8N3P4 1428 aa27.34■■□□□ 1.97
BRF1-217ENST00000550375 WDR7Q9Y4E6 1490 aa27.31■■□□□ 1.96
BRF1-217ENST00000550375 KIF13AQ9H1H9 1805 aa27.3■■□□□ 1.96
BRF1-217ENST00000550375 ABCC10Q5T3U5 1492 aa27.29■■□□□ 1.96
BRF1-217ENST00000550375 DIP2BQ9P265 1576 aa27.29■■□□□ 1.96
BRF1-217ENST00000550375 CCDC18Q5T9S5 1454 aa27.28■■□□□ 1.96
BRF1-217ENST00000550375 FAM69CQ0P6D2 419 aa27.27■■□□□ 1.96
BRF1-217ENST00000550375 KCNH8Q96L42 1107 aa27.27■■□□□ 1.96
BRF1-217ENST00000550375 PLEKHD1A6NEE1 506 aa27.25■■□□□ 1.95
BRF1-217ENST00000550375 CDK11AQ9UQ88 783 aaPredicted RBP27.21■■□□□ 1.95
BRF1-217ENST00000550375 GLI2P10070 1586 aa27.17■■□□□ 1.94
BRF1-217ENST00000550375 TSPOAP1O95153 1857 aa27.15■■□□□ 1.94
BRF1-217ENST00000550375 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
BRF1-217ENST00000550375 CFAP43Q8NDM7 1665 aa27.13■■□□□ 1.93
BRF1-217ENST00000550375 TROQ12816 1431 aaPredicted RBP27.12■■□□□ 1.93
BRF1-217ENST00000550375 TIAM1Q13009 1591 aa27.11■■□□□ 1.93
BRF1-217ENST00000550375 MAP3K4Q9Y6R4 1608 aa27.09■■□□□ 1.93
BRF1-217ENST00000550375 KIF14Q15058 1648 aa27.08■■□□□ 1.93
BRF1-217ENST00000550375 ABCA9Q8IUA7 1624 aa27.08■■□□□ 1.93
BRF1-217ENST00000550375 APLP2Q06481 763 aa27.07■■□□□ 1.92
BRF1-217ENST00000550375 MTUS2Q5JR59 1369 aa27.06■■□□□ 1.92
BRF1-217ENST00000550375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.05■■□□□ 1.922e-7■■■□□ 19.1
BRF1-217ENST00000550375 CD109Q6YHK3 1445 aa27.04■■□□□ 1.92
BRF1-217ENST00000550375 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
BRF1-217ENST00000550375 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
BRF1-217ENST00000550375 MAP3K1Q13233 1512 aa27.02■■□□□ 1.92
BRF1-217ENST00000550375 PPRC1Q5VV67 1664 aaKnown RBP27.01■■□□□ 1.91
BRF1-217ENST00000550375 EHBP1L1Q8N3D4 1523 aa27■■□□□ 1.91
BRF1-217ENST00000550375 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
BRF1-217ENST00000550375 LRRC9Q6ZRR7 1453 aa26.97■■□□□ 1.91
BRF1-217ENST00000550375 MYO5CQ9NQX4 1742 aa26.94■■□□□ 1.9
BRF1-217ENST00000550375 TEX14Q8IWB6 1497 aa26.92■■□□□ 1.9
BRF1-217ENST00000550375 SUPT6HQ7KZ85 1726 aaKnown RBP26.91■■□□□ 1.9
BRF1-217ENST00000550375 CDC42BPAQ5VT25 1732 aa26.87■■□□□ 1.89
BRF1-217ENST00000550375 PLCH2O75038 1416 aa26.86■■□□□ 1.89
BRF1-217ENST00000550375 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
BRF1-217ENST00000550375 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
BRF1-217ENST00000550375 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
BRF1-217ENST00000550375 PREX2Q70Z35 1606 aa26.84■■□□□ 1.89
BRF1-217ENST00000550375 FANCAO15360 1455 aa26.83■■□□□ 1.89
BRF1-217ENST00000550375 ARHGAP5Q13017 1502 aa26.82■■□□□ 1.88
BRF1-217ENST00000550375 GPATCH8Q9UKJ3 1502 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms