RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 FAM9AQ8IZU1 332 aaPredicted RBP24.8■■□□□ 1.56
GPN3-206ENST00000549963 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
GPN3-206ENST00000549963 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
GPN3-206ENST00000549963 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
GPN3-206ENST00000549963 CYB5RLQ6IPT4 315 aa24.72■■□□□ 1.55
GPN3-206ENST00000549963 SHROOM2Q13796 1616 aa24.71■■□□□ 1.55
GPN3-206ENST00000549963 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
GPN3-206ENST00000549963 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
GPN3-206ENST00000549963 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
GPN3-206ENST00000549963 CTTNBP2Q8WZ74 1663 aa24.6■■□□□ 1.53
GPN3-206ENST00000549963 CARMIL2Q6F5E8 1435 aa24.58■■□□□ 1.53
GPN3-206ENST00000549963 ERCC6L2Q5T890 1561 aa24.57■■□□□ 1.52
GPN3-206ENST00000549963 KIF21BO75037 1637 aa24.55■■□□□ 1.52
GPN3-206ENST00000549963 UBTFP17480 764 aaKnown RBP24.49■■□□□ 1.51
GPN3-206ENST00000549963 UGGT2Q9NYU1 1516 aa24.49■■□□□ 1.51
GPN3-206ENST00000549963 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
GPN3-206ENST00000549963 GOLGA3Q08378 1498 aa24.45■■□□□ 1.51
GPN3-206ENST00000549963 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
GPN3-206ENST00000549963 PTPRGP23470 1445 aa24.43■■□□□ 1.5
GPN3-206ENST00000549963 TTBK1Q5TCY1 1321 aaPredicted RBP24.42■■□□□ 1.5
GPN3-206ENST00000549963 DISP1Q96F81 1524 aa24.4■■□□□ 1.5
GPN3-206ENST00000549963 NPM1P06748 294 aaKnown RBP eCLIP24.37■■□□□ 1.49
GPN3-206ENST00000549963 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
GPN3-206ENST00000549963 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
GPN3-206ENST00000549963 P3H3Q8IVL6 736 aa24.3■■□□□ 1.48
GPN3-206ENST00000549963 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
GPN3-206ENST00000549963 SAMD9Q5K651 1589 aa24.24■■□□□ 1.47
GPN3-206ENST00000549963 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
GPN3-206ENST00000549963 ADCY10Q96PN6 1610 aa24.21■■□□□ 1.47
GPN3-206ENST00000549963 EFCAB5A4FU69 1503 aa24.21■■□□□ 1.47
GPN3-206ENST00000549963 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
GPN3-206ENST00000549963 ABCC2Q92887 1545 aa24.16■■□□□ 1.46
GPN3-206ENST00000549963 FHOD3Q2V2M9 1422 aa24.12■■□□□ 1.45
GPN3-206ENST00000549963 PLB1Q6P1J6 1458 aa24.12■■□□□ 1.45
GPN3-206ENST00000549963 ABCA8O94911 1581 aa24.09■■□□□ 1.45
GPN3-206ENST00000549963 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
GPN3-206ENST00000549963 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
GPN3-206ENST00000549963 MAPKBP1O60336 1514 aa24.06■■□□□ 1.44
GPN3-206ENST00000549963 KDM5BQ9UGL1 1544 aa24.05■■□□□ 1.44
GPN3-206ENST00000549963 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
GPN3-206ENST00000549963 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
GPN3-206ENST00000549963 CLIP1P30622 1438 aa24.02■■□□□ 1.44
GPN3-206ENST00000549963 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
GPN3-206ENST00000549963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
GPN3-206ENST00000549963 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
GPN3-206ENST00000549963 FAM69CQ0P6D2 419 aa23.99■■□□□ 1.43
GPN3-206ENST00000549963 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
GPN3-206ENST00000549963 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
GPN3-206ENST00000549963 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
GPN3-206ENST00000549963 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
GPN3-206ENST00000549963 ATP10BO94823 1461 aa23.93■■□□□ 1.42
GPN3-206ENST00000549963 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
GPN3-206ENST00000549963 KIF13AQ9H1H9 1805 aa23.91■■□□□ 1.42
GPN3-206ENST00000549963 NUP153P49790 1475 aaKnown RBP23.89■■□□□ 1.42
GPN3-206ENST00000549963 WDR7Q9Y4E6 1490 aa23.87■■□□□ 1.41
GPN3-206ENST00000549963 DIP2BQ9P265 1576 aa23.87■■□□□ 1.41
GPN3-206ENST00000549963 PLEKHD1A6NEE1 506 aa23.87■■□□□ 1.41
GPN3-206ENST00000549963 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
GPN3-206ENST00000549963 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
GPN3-206ENST00000549963 CDK11AQ9UQ88 783 aaPredicted RBP23.84■■□□□ 1.41
GPN3-206ENST00000549963 EPRSP07814 1512 aaKnown RBP23.82■■□□□ 1.4
GPN3-206ENST00000549963 GLI2P10070 1586 aa23.82■■□□□ 1.4
GPN3-206ENST00000549963 CASKIN1Q8WXD9 1431 aa23.81■■□□□ 1.4
GPN3-206ENST00000549963 TSPOAP1O95153 1857 aa23.77■■□□□ 1.4
GPN3-206ENST00000549963 FYCO1Q9BQS8 1478 aa23.76■■□□□ 1.39
GPN3-206ENST00000549963 PCF11O94913 1555 aaKnown RBP23.74■■□□□ 1.39
GPN3-206ENST00000549963 CCDC18Q5T9S5 1454 aa23.74■■□□□ 1.39
GPN3-206ENST00000549963 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
GPN3-206ENST00000549963 CFAP43Q8NDM7 1665 aa23.7■■□□□ 1.38
GPN3-206ENST00000549963 CD109Q6YHK3 1445 aa23.69■■□□□ 1.38
GPN3-206ENST00000549963 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
GPN3-206ENST00000549963 LRRIQ1Q96JM4 1722 aa23.67■■□□□ 1.38
GPN3-206ENST00000549963 TEX14Q8IWB6 1497 aa23.66■■□□□ 1.38
GPN3-206ENST00000549963 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
GPN3-206ENST00000549963 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
GPN3-206ENST00000549963 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
GPN3-206ENST00000549963 MAGI3Q5TCQ9 1506 aa23.59■■□□□ 1.37
GPN3-206ENST00000549963 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
GPN3-206ENST00000549963 APLP2Q06481 763 aa23.57■■□□□ 1.36
GPN3-206ENST00000549963 KIF14Q15058 1648 aa23.55■■□□□ 1.36
GPN3-206ENST00000549963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.36
GPN3-206ENST00000549963 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
GPN3-206ENST00000549963 PHLDB1Q86UU1 1377 aa23.52■■□□□ 1.36
GPN3-206ENST00000549963 KDM6BO15054 1643 aa23.52■■□□□ 1.36
GPN3-206ENST00000549963 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
GPN3-206ENST00000549963 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
GPN3-206ENST00000549963 PLCH2O75038 1416 aa23.46■■□□□ 1.35
GPN3-206ENST00000549963 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
GPN3-206ENST00000549963 NEO1Q92859 1461 aa23.46■■□□□ 1.35
GPN3-206ENST00000549963 CFAP74Q9C0B2 1584 aa23.44■■□□□ 1.34
GPN3-206ENST00000549963 TIAM1Q13009 1591 aa23.44■■□□□ 1.34
GPN3-206ENST00000549963 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
GPN3-206ENST00000549963 FANCAO15360 1455 aa23.43■■□□□ 1.34
GPN3-206ENST00000549963 EHBP1L1Q8N3D4 1523 aa23.42■■□□□ 1.34
GPN3-206ENST00000549963 ARAP3Q8WWN8 1544 aa23.4■■□□□ 1.34
GPN3-206ENST00000549963 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
GPN3-206ENST00000549963 CCNB3Q8WWL7 1395 aa23.39■■□□□ 1.33
GPN3-206ENST00000549963 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
GPN3-206ENST00000549963 SUPT6HQ7KZ85 1726 aaKnown RBP23.36■■□□□ 1.33
GPN3-206ENST00000549963 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms