RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
PFDN5-207ENST00000549759 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
PFDN5-207ENST00000549759 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
PFDN5-207ENST00000549759 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
PFDN5-207ENST00000549759 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
PFDN5-207ENST00000549759 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
PFDN5-207ENST00000549759 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
PFDN5-207ENST00000549759 CARMIL2Q6F5E8 1435 aa20.95■□□□□ 0.94
PFDN5-207ENST00000549759 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
PFDN5-207ENST00000549759 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
PFDN5-207ENST00000549759 IQGAP2Q13576 1575 aa20.92■□□□□ 0.94
PFDN5-207ENST00000549759 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
PFDN5-207ENST00000549759 KIF21BO75037 1637 aa20.89■□□□□ 0.93
PFDN5-207ENST00000549759 GOLGA3Q08378 1498 aa20.88■□□□□ 0.93
PFDN5-207ENST00000549759 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
PFDN5-207ENST00000549759 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
PFDN5-207ENST00000549759 UGGT2Q9NYU1 1516 aa20.84■□□□□ 0.93
PFDN5-207ENST00000549759 PTPRGP23470 1445 aa20.84■□□□□ 0.93
PFDN5-207ENST00000549759 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
PFDN5-207ENST00000549759 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
PFDN5-207ENST00000549759 DISP1Q96F81 1524 aa20.78■□□□□ 0.92
PFDN5-207ENST00000549759 NPM1P06748 294 aaKnown RBP eCLIP20.77■□□□□ 0.92
PFDN5-207ENST00000549759 P3H3Q8IVL6 736 aa20.76■□□□□ 0.91
PFDN5-207ENST00000549759 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
PFDN5-207ENST00000549759 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
PFDN5-207ENST00000549759 UACAQ9BZF9 1416 aa20.66■□□□□ 0.9
PFDN5-207ENST00000549759 LOC105371045A0A1W2PR82 267 aa20.65■□□□□ 0.9
PFDN5-207ENST00000549759 EFCAB5A4FU69 1503 aa20.62■□□□□ 0.89
PFDN5-207ENST00000549759 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
PFDN5-207ENST00000549759 UHRF1BP1LA0JNW5 1464 aa20.6■□□□□ 0.89
PFDN5-207ENST00000549759 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
PFDN5-207ENST00000549759 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
PFDN5-207ENST00000549759 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
PFDN5-207ENST00000549759 CLIP1P30622 1438 aa20.54■□□□□ 0.88
PFDN5-207ENST00000549759 ABCC2Q92887 1545 aa20.54■□□□□ 0.88
PFDN5-207ENST00000549759 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
PFDN5-207ENST00000549759 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
PFDN5-207ENST00000549759 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.88
PFDN5-207ENST00000549759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
PFDN5-207ENST00000549759 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
PFDN5-207ENST00000549759 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
PFDN5-207ENST00000549759 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
PFDN5-207ENST00000549759 ABCA8O94911 1581 aa20.47■□□□□ 0.87
PFDN5-207ENST00000549759 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
PFDN5-207ENST00000549759 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
PFDN5-207ENST00000549759 FAM69CQ0P6D2 419 aa20.44■□□□□ 0.86
PFDN5-207ENST00000549759 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
PFDN5-207ENST00000549759 ASXL2Q76L83 1435 aa20.42■□□□□ 0.86
PFDN5-207ENST00000549759 ATP10BO94823 1461 aa20.39■□□□□ 0.85
PFDN5-207ENST00000549759 PLEKHD1A6NEE1 506 aa20.39■□□□□ 0.85
PFDN5-207ENST00000549759 RAPGEF6Q8TEU7 1601 aa20.38■□□□□ 0.85
PFDN5-207ENST00000549759 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
PFDN5-207ENST00000549759 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
PFDN5-207ENST00000549759 ABCC10Q5T3U5 1492 aa20.37■□□□□ 0.85
PFDN5-207ENST00000549759 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
PFDN5-207ENST00000549759 CASKIN1Q8WXD9 1431 aa20.34■□□□□ 0.85
PFDN5-207ENST00000549759 WDR7Q9Y4E6 1490 aa20.32■□□□□ 0.84
PFDN5-207ENST00000549759 ZCCHC11Q5TAX3 1644 aaKnown RBP20.32■□□□□ 0.84
PFDN5-207ENST00000549759 EPRSP07814 1512 aaKnown RBP20.27■□□□□ 0.84
PFDN5-207ENST00000549759 HECW1Q76N89 1606 aa20.27■□□□□ 0.83
PFDN5-207ENST00000549759 FYCO1Q9BQS8 1478 aa20.25■□□□□ 0.83
PFDN5-207ENST00000549759 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
PFDN5-207ENST00000549759 DIP2BQ9P265 1576 aa20.22■□□□□ 0.83
PFDN5-207ENST00000549759 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
PFDN5-207ENST00000549759 GLI2P10070 1586 aa20.21■□□□□ 0.83
PFDN5-207ENST00000549759 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
PFDN5-207ENST00000549759 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
PFDN5-207ENST00000549759 APLP2Q06481 763 aa20.18■□□□□ 0.82
PFDN5-207ENST00000549759 CD109Q6YHK3 1445 aa20.18■□□□□ 0.82
PFDN5-207ENST00000549759 TROQ12816 1431 aaPredicted RBP20.14■□□□□ 0.81
PFDN5-207ENST00000549759 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
PFDN5-207ENST00000549759 TEX14Q8IWB6 1497 aa20.11■□□□□ 0.81
PFDN5-207ENST00000549759 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
PFDN5-207ENST00000549759 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
PFDN5-207ENST00000549759 PHLDB1Q86UU1 1377 aa20.06■□□□□ 0.8
PFDN5-207ENST00000549759 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
PFDN5-207ENST00000549759 EFCAB2Q5VUJ9 269 aa20.04■□□□□ 0.8
PFDN5-207ENST00000549759 ABCA9Q8IUA7 1624 aa20.03■□□□□ 0.8
PFDN5-207ENST00000549759 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.83e-9■□□□□ 10.9
PFDN5-207ENST00000549759 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.8
PFDN5-207ENST00000549759 PLCH2O75038 1416 aa20.02■□□□□ 0.79
PFDN5-207ENST00000549759 MAP3K1Q13233 1512 aa20.01■□□□□ 0.79
PFDN5-207ENST00000549759 KIF14Q15058 1648 aa20■□□□□ 0.79
PFDN5-207ENST00000549759 LRRIQ1Q96JM4 1722 aa19.97■□□□□ 0.79
PFDN5-207ENST00000549759 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
PFDN5-207ENST00000549759 NEO1Q92859 1461 aa19.97■□□□□ 0.79
PFDN5-207ENST00000549759 CCNB3Q8WWL7 1395 aa19.96■□□□□ 0.79
PFDN5-207ENST00000549759 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
PFDN5-207ENST00000549759 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
PFDN5-207ENST00000549759 FANCAO15360 1455 aa19.95■□□□□ 0.78
PFDN5-207ENST00000549759 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
PFDN5-207ENST00000549759 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
PFDN5-207ENST00000549759 EHBP1L1Q8N3D4 1523 aa19.94■□□□□ 0.78
PFDN5-207ENST00000549759 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
PFDN5-207ENST00000549759 TTC37Q6PGP7 1564 aa19.92■□□□□ 0.78
PFDN5-207ENST00000549759 ARAP3Q8WWN8 1544 aa19.91■□□□□ 0.78
PFDN5-207ENST00000549759 PPRC1Q5VV67 1664 aaKnown RBP19.91■□□□□ 0.78
PFDN5-207ENST00000549759 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
PFDN5-207ENST00000549759 KDM6BO15054 1643 aa19.89■□□□□ 0.77
PFDN5-207ENST00000549759 ARHGAP5Q13017 1502 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms