RNA–Protein interactions for RNA: ENST00000549524.1

TCHP-207, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 3,428 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-207ENST00000549524 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
TCHP-207ENST00000549524 CLIP1P30622 1438 aa12.89□□□□□ -0.35
TCHP-207ENST00000549524 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
TCHP-207ENST00000549524 THOC2Q8NI27 1593 aaKnown RBP12.87□□□□□ -0.35
TCHP-207ENST00000549524 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
TCHP-207ENST00000549524 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
TCHP-207ENST00000549524 CUX2O14529 1486 aa12.86□□□□□ -0.35
TCHP-207ENST00000549524 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
TCHP-207ENST00000549524 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.36
TCHP-207ENST00000549524 LRRIQ1Q96JM4 1722 aa12.83□□□□□ -0.36
TCHP-207ENST00000549524 MIER1Q8N108 512 aa12.82□□□□□ -0.36
TCHP-207ENST00000549524 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
TCHP-207ENST00000549524 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
TCHP-207ENST00000549524 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
TCHP-207ENST00000549524 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
TCHP-207ENST00000549524 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.36
TCHP-207ENST00000549524 CARMIL1Q5VZK9 1371 aa12.73□□□□□ -0.37
TCHP-207ENST00000549524 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
TCHP-207ENST00000549524 APLP2Q06481 763 aa12.73□□□□□ -0.37
TCHP-207ENST00000549524 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
TCHP-207ENST00000549524 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
TCHP-207ENST00000549524 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.37
TCHP-207ENST00000549524 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.38
TCHP-207ENST00000549524 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
TCHP-207ENST00000549524 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
TCHP-207ENST00000549524 UGGT2Q9NYU1 1516 aa12.66□□□□□ -0.38
TCHP-207ENST00000549524 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
TCHP-207ENST00000549524 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
TCHP-207ENST00000549524 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
TCHP-207ENST00000549524 FHAD1B1AJZ9 1412 aa12.63□□□□□ -0.39
TCHP-207ENST00000549524 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
TCHP-207ENST00000549524 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
TCHP-207ENST00000549524 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
TCHP-207ENST00000549524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.61□□□□□ -0.39
TCHP-207ENST00000549524 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
TCHP-207ENST00000549524 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
TCHP-207ENST00000549524 KIAA0556O60303 1618 aa12.56□□□□□ -0.4
TCHP-207ENST00000549524 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
TCHP-207ENST00000549524 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
TCHP-207ENST00000549524 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
TCHP-207ENST00000549524 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
TCHP-207ENST00000549524 SUPT6HQ7KZ85 1726 aaKnown RBP12.53□□□□□ -0.4
TCHP-207ENST00000549524 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.4
TCHP-207ENST00000549524 CEP170Q5SW79 1584 aa12.52□□□□□ -0.41
TCHP-207ENST00000549524 SHROOM2Q13796 1616 aa12.52□□□□□ -0.41
TCHP-207ENST00000549524 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
TCHP-207ENST00000549524 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
TCHP-207ENST00000549524 GRIN2AQ12879 1464 aa12.5□□□□□ -0.41
TCHP-207ENST00000549524 DISP1Q96F81 1524 aa12.5□□□□□ -0.41
TCHP-207ENST00000549524 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
TCHP-207ENST00000549524 GCC2Q8IWJ2 1684 aa12.49□□□□□ -0.41
TCHP-207ENST00000549524 NUP160Q12769 1436 aa12.48□□□□□ -0.41
TCHP-207ENST00000549524 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
TCHP-207ENST00000549524 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
TCHP-207ENST00000549524 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
TCHP-207ENST00000549524 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
TCHP-207ENST00000549524 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.42
TCHP-207ENST00000549524 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
TCHP-207ENST00000549524 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
TCHP-207ENST00000549524 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
TCHP-207ENST00000549524 FHOD3Q2V2M9 1422 aa12.44□□□□□ -0.42
TCHP-207ENST00000549524 DHX57Q6P158 1386 aaKnown RBP12.43□□□□□ -0.42
TCHP-207ENST00000549524 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
TCHP-207ENST00000549524 KANK4Q5T7N3 995 aaPredicted RBP12.42□□□□□ -0.42
TCHP-207ENST00000549524 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
TCHP-207ENST00000549524 CHD1O14646 1710 aa12.4□□□□□ -0.42
TCHP-207ENST00000549524 ABCA8O94911 1581 aa12.39□□□□□ -0.43
TCHP-207ENST00000549524 AKNAQ7Z591 1439 aa12.39□□□□□ -0.43
TCHP-207ENST00000549524 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
TCHP-207ENST00000549524 PTPN23Q9H3S7 1636 aa12.39□□□□□ -0.43
TCHP-207ENST00000549524 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
TCHP-207ENST00000549524 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
TCHP-207ENST00000549524 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
TCHP-207ENST00000549524 BCANQ96GW7 911 aa12.37□□□□□ -0.43
TCHP-207ENST00000549524 ITGAEP38570 1179 aa12.35□□□□□ -0.43
TCHP-207ENST00000549524 ADGBQ8N7X0 1667 aa12.35□□□□□ -0.43
TCHP-207ENST00000549524 NEFLP07196 543 aa12.34□□□□□ -0.43
TCHP-207ENST00000549524 FGD6Q6ZV73 1430 aa12.34□□□□□ -0.43
TCHP-207ENST00000549524 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.43
TCHP-207ENST00000549524 NUP153P49790 1475 aaKnown RBP12.33□□□□□ -0.43
TCHP-207ENST00000549524 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
TCHP-207ENST00000549524 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
TCHP-207ENST00000549524 FKBP8Q14318 412 aa12.33□□□□□ -0.44
TCHP-207ENST00000549524 MYOM3Q5VTT5 1437 aa12.32□□□□□ -0.44
TCHP-207ENST00000549524 MIA2Q96PC5 1412 aa12.32□□□□□ -0.44
TCHP-207ENST00000549524 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
TCHP-207ENST00000549524 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
TCHP-207ENST00000549524 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
TCHP-207ENST00000549524 BCL11AQ9H165 835 aa12.29□□□□□ -0.44
TCHP-207ENST00000549524 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
TCHP-207ENST00000549524 DDX10Q13206 875 aaKnown RBP12.27□□□□□ -0.45
TCHP-207ENST00000549524 CDK13Q14004 1512 aaKnown RBP12.24□□□□□ -0.45
TCHP-207ENST00000549524 SETD5Q9C0A6 1442 aa12.24□□□□□ -0.45
TCHP-207ENST00000549524 PTPRKQ15262 1439 aa12.22□□□□□ -0.45
TCHP-207ENST00000549524 KDM5BQ9UGL1 1544 aa12.22□□□□□ -0.45
TCHP-207ENST00000549524 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
TCHP-207ENST00000549524 ABCC10Q5T3U5 1492 aa12.22□□□□□ -0.45
TCHP-207ENST00000549524 KIF14Q15058 1648 aa12.21□□□□□ -0.45
TCHP-207ENST00000549524 ADGRL2O95490 1459 aa12.21□□□□□ -0.45
TCHP-207ENST00000549524 RBM19Q9Y4C8 960 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms