RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CCNB3Q8WWL7 1395 aa12.61□□□□□ -0.39
PPFIA2-216ENST00000549396 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
PPFIA2-216ENST00000549396 KANK1Q14678 1352 aa12.6□□□□□ -0.39
PPFIA2-216ENST00000549396 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-216ENST00000549396 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
PPFIA2-216ENST00000549396 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
PPFIA2-216ENST00000549396 TIMELESSQ9UNS1 1208 aa12.57□□□□□ -0.4
PPFIA2-216ENST00000549396 WIZO95785 1651 aa12.57□□□□□ -0.4
PPFIA2-216ENST00000549396 RAPGEF2Q9Y4G8 1499 aa12.56□□□□□ -0.4
PPFIA2-216ENST00000549396 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-216ENST00000549396 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
PPFIA2-216ENST00000549396 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
PPFIA2-216ENST00000549396 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
PPFIA2-216ENST00000549396 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
PPFIA2-216ENST00000549396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPFIA2-216ENST00000549396 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
PPFIA2-216ENST00000549396 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
PPFIA2-216ENST00000549396 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
PPFIA2-216ENST00000549396 KCNH8Q96L42 1107 aa12.5□□□□□ -0.41
PPFIA2-216ENST00000549396 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
PPFIA2-216ENST00000549396 EIF4G2P78344 907 aaKnown RBP eCLIP12.48□□□□□ -0.41
PPFIA2-216ENST00000549396 CNGB1Q14028 1251 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-216ENST00000549396 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
PPFIA2-216ENST00000549396 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
PPFIA2-216ENST00000549396 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
PPFIA2-216ENST00000549396 RTL5Q5HYW3 569 aaPredicted RBP12.42□□□□□ -0.42
PPFIA2-216ENST00000549396 EIF5BO60841 1220 aaKnown RBP12.41□□□□□ -0.42
PPFIA2-216ENST00000549396 CFAP53Q96M91 514 aa12.4□□□□□ -0.42
PPFIA2-216ENST00000549396 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
PPFIA2-216ENST00000549396 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
PPFIA2-216ENST00000549396 ANKRD30AQ9BXX3 1397 aa12.39□□□□□ -0.43
PPFIA2-216ENST00000549396 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
PPFIA2-216ENST00000549396 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
PPFIA2-216ENST00000549396 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
PPFIA2-216ENST00000549396 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
PPFIA2-216ENST00000549396 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
PPFIA2-216ENST00000549396 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
PPFIA2-216ENST00000549396 CFTRP13569 1480 aa12.32□□□□□ -0.44
PPFIA2-216ENST00000549396 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
PPFIA2-216ENST00000549396 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
PPFIA2-216ENST00000549396 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
PPFIA2-216ENST00000549396 UPF2Q9HAU5 1272 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-216ENST00000549396 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
PPFIA2-216ENST00000549396 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-216ENST00000549396 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
PPFIA2-216ENST00000549396 CUX1P39880 1505 aa12.29□□□□□ -0.44
PPFIA2-216ENST00000549396 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
PPFIA2-216ENST00000549396 KNSTRNQ9Y448 316 aa12.29□□□□□ -0.44
PPFIA2-216ENST00000549396 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
PPFIA2-216ENST00000549396 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
PPFIA2-216ENST00000549396 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
PPFIA2-216ENST00000549396 PTPRGP23470 1445 aa12.28□□□□□ -0.44
PPFIA2-216ENST00000549396 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
PPFIA2-216ENST00000549396 CARD11Q9BXL7 1154 aa12.27□□□□□ -0.44
PPFIA2-216ENST00000549396 UACAQ9BZF9 1416 aa12.27□□□□□ -0.44
PPFIA2-216ENST00000549396 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
PPFIA2-216ENST00000549396 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
PPFIA2-216ENST00000549396 TMF1P82094 1093 aa12.25□□□□□ -0.45
PPFIA2-216ENST00000549396 POGKQ9P215 609 aa12.25□□□□□ -0.45
PPFIA2-216ENST00000549396 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
PPFIA2-216ENST00000549396 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
PPFIA2-216ENST00000549396 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
PPFIA2-216ENST00000549396 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
PPFIA2-216ENST00000549396 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
PPFIA2-216ENST00000549396 EFCAB5A4FU69 1503 aa12.24□□□□□ -0.45
PPFIA2-216ENST00000549396 MS4A1P11836 297 aa12.24□□□□□ -0.45
PPFIA2-216ENST00000549396 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
PPFIA2-216ENST00000549396 HNRNPUQ00839 825 aaKnown RBP eCLIP12.23□□□□□ -0.45
PPFIA2-216ENST00000549396 KIF21BO75037 1637 aa12.23□□□□□ -0.45
PPFIA2-216ENST00000549396 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
PPFIA2-216ENST00000549396 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
PPFIA2-216ENST00000549396 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.45
PPFIA2-216ENST00000549396 SPAG9O60271 1321 aaKnown RBP12.21□□□□□ -0.46
PPFIA2-216ENST00000549396 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.46
PPFIA2-216ENST00000549396 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
PPFIA2-216ENST00000549396 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
PPFIA2-216ENST00000549396 IGF1RP08069 1367 aa12.18□□□□□ -0.46
PPFIA2-216ENST00000549396 RGL3Q3MIN7 710 aa12.17□□□□□ -0.46
PPFIA2-216ENST00000549396 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
PPFIA2-216ENST00000549396 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
PPFIA2-216ENST00000549396 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
PPFIA2-216ENST00000549396 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
PPFIA2-216ENST00000549396 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
PPFIA2-216ENST00000549396 ROCK2O75116 1388 aaKnown RBP12.16□□□□□ -0.46
PPFIA2-216ENST00000549396 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
PPFIA2-216ENST00000549396 NUP155O75694 1391 aa12.14□□□□□ -0.47
PPFIA2-216ENST00000549396 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
PPFIA2-216ENST00000549396 HDGFL2Q7Z4V5 671 aaPredicted RBP12.14□□□□□ -0.47
PPFIA2-216ENST00000549396 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
PPFIA2-216ENST00000549396 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
PPFIA2-216ENST00000549396 FYCO1Q9BQS8 1478 aa12.12□□□□□ -0.47
PPFIA2-216ENST00000549396 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
PPFIA2-216ENST00000549396 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
PPFIA2-216ENST00000549396 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
PPFIA2-216ENST00000549396 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
PPFIA2-216ENST00000549396 PKD2Q13563 968 aa12.11□□□□□ -0.47
PPFIA2-216ENST00000549396 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
PPFIA2-216ENST00000549396 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
PPFIA2-216ENST00000549396 DCAF11Q8TEB1 546 aa12.09□□□□□ -0.47
PPFIA2-216ENST00000549396 MPHOSPH9Q99550 1183 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms