RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
CALCOCO1-213ENST00000549349 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
CALCOCO1-213ENST00000549349 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
CALCOCO1-213ENST00000549349 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
CALCOCO1-213ENST00000549349 IQGAP2Q13576 1575 aa15.67■□□□□ 0.1
CALCOCO1-213ENST00000549349 LOC105371045A0A1W2PR82 267 aa15.67■□□□□ 0.1
CALCOCO1-213ENST00000549349 UBTFP17480 764 aaKnown RBP15.67■□□□□ 0.1
CALCOCO1-213ENST00000549349 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
CALCOCO1-213ENST00000549349 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
CALCOCO1-213ENST00000549349 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
CALCOCO1-213ENST00000549349 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
CALCOCO1-213ENST00000549349 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
CALCOCO1-213ENST00000549349 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
CALCOCO1-213ENST00000549349 ARHGEF11O15085 1522 aa15.62■□□□□ 0.09
CALCOCO1-213ENST00000549349 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
CALCOCO1-213ENST00000549349 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
CALCOCO1-213ENST00000549349 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
CALCOCO1-213ENST00000549349 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
CALCOCO1-213ENST00000549349 KIAA0556O60303 1618 aa15.54■□□□□ 0.08
CALCOCO1-213ENST00000549349 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
CALCOCO1-213ENST00000549349 ARAP1Q96P48 1450 aa15.52■□□□□ 0.08
CALCOCO1-213ENST00000549349 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
CALCOCO1-213ENST00000549349 SAMD9Q5K651 1589 aa15.51■□□□□ 0.07
CALCOCO1-213ENST00000549349 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
CALCOCO1-213ENST00000549349 CARMIL2Q6F5E8 1435 aa15.49■□□□□ 0.07
CALCOCO1-213ENST00000549349 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.06
CALCOCO1-213ENST00000549349 FHOD3Q2V2M9 1422 aa15.45■□□□□ 0.06
CALCOCO1-213ENST00000549349 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
CALCOCO1-213ENST00000549349 PTPRGP23470 1445 aa15.43■□□□□ 0.06
CALCOCO1-213ENST00000549349 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
CALCOCO1-213ENST00000549349 CLIP1P30622 1438 aa15.41■□□□□ 0.06
CALCOCO1-213ENST00000549349 ADCY10Q96PN6 1610 aa15.38■□□□□ 0.05
CALCOCO1-213ENST00000549349 PLB1Q6P1J6 1458 aa15.37■□□□□ 0.05
CALCOCO1-213ENST00000549349 ABCA8O94911 1581 aa15.34■□□□□ 0.05
CALCOCO1-213ENST00000549349 RAPGEF6Q8TEU7 1601 aa15.34■□□□□ 0.05
CALCOCO1-213ENST00000549349 LRRIQ1Q96JM4 1722 aa15.33■□□□□ 0.04
CALCOCO1-213ENST00000549349 UACAQ9BZF9 1416 aa15.33■□□□□ 0.04
CALCOCO1-213ENST00000549349 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
CALCOCO1-213ENST00000549349 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
CALCOCO1-213ENST00000549349 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
CALCOCO1-213ENST00000549349 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
CALCOCO1-213ENST00000549349 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
CALCOCO1-213ENST00000549349 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.04
CALCOCO1-213ENST00000549349 FMN1Q68DA7 1419 aa15.27■□□□□ 0.04
CALCOCO1-213ENST00000549349 NUP153P49790 1475 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-213ENST00000549349 HECW1Q76N89 1606 aa15.23■□□□□ 0.03
CALCOCO1-213ENST00000549349 ATP10BO94823 1461 aa15.22■□□□□ 0.03
CALCOCO1-213ENST00000549349 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
CALCOCO1-213ENST00000549349 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
CALCOCO1-213ENST00000549349 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
CALCOCO1-213ENST00000549349 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
CALCOCO1-213ENST00000549349 VPS8Q8N3P4 1428 aa15.19■□□□□ 0.02
CALCOCO1-213ENST00000549349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
CALCOCO1-213ENST00000549349 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
CALCOCO1-213ENST00000549349 KIF13AQ9H1H9 1805 aa15.18■□□□□ 0.02
CALCOCO1-213ENST00000549349 FYCO1Q9BQS8 1478 aa15.18■□□□□ 0.02
CALCOCO1-213ENST00000549349 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
CALCOCO1-213ENST00000549349 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
CALCOCO1-213ENST00000549349 ASXL2Q76L83 1435 aa15.15■□□□□ 0.02
CALCOCO1-213ENST00000549349 TSPOAP1O95153 1857 aa15.14■□□□□ 0.01
CALCOCO1-213ENST00000549349 CFAP43Q8NDM7 1665 aa15.12■□□□□ 0.01
CALCOCO1-213ENST00000549349 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
CALCOCO1-213ENST00000549349 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
CALCOCO1-213ENST00000549349 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
CALCOCO1-213ENST00000549349 WDR7Q9Y4E6 1490 aa15.09■□□□□ 0.01
CALCOCO1-213ENST00000549349 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
CALCOCO1-213ENST00000549349 DIP2BQ9P265 1576 aa15.09■□□□□ 0.01
CALCOCO1-213ENST00000549349 PLEKHD1A6NEE1 506 aa15.08■□□□□ 0
CALCOCO1-213ENST00000549349 TIAM1Q13009 1591 aa15.07■□□□□ 0
CALCOCO1-213ENST00000549349 KIF14Q15058 1648 aa15.06■□□□□ 0
CALCOCO1-213ENST00000549349 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
CALCOCO1-213ENST00000549349 FAM69CQ0P6D2 419 aa15.05■□□□□ -0
CALCOCO1-213ENST00000549349 KANK4Q5T7N3 995 aaPredicted RBP15.04■□□□□ -0
CALCOCO1-213ENST00000549349 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
CALCOCO1-213ENST00000549349 TROQ12816 1431 aaPredicted RBP15.02■□□□□ -0
CALCOCO1-213ENST00000549349 PPARGC1BQ86YN6 1023 aaKnown RBP15.02■□□□□ -0
CALCOCO1-213ENST00000549349 PPRC1Q5VV67 1664 aaKnown RBP15.01□□□□□ -0.01
CALCOCO1-213ENST00000549349 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
CALCOCO1-213ENST00000549349 GLI2P10070 1586 aa15.01□□□□□ -0.01
CALCOCO1-213ENST00000549349 TTC37Q6PGP7 1564 aa15.01□□□□□ -0.01
CALCOCO1-213ENST00000549349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.01□□□□□ -0.01
CALCOCO1-213ENST00000549349 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
CALCOCO1-213ENST00000549349 ABCA9Q8IUA7 1624 aa15□□□□□ -0.01
CALCOCO1-213ENST00000549349 APLP2Q06481 763 aa15□□□□□ -0.01
CALCOCO1-213ENST00000549349 MAP3K1Q13233 1512 aa15□□□□□ -0.01
CALCOCO1-213ENST00000549349 CDC42BPAQ5VT25 1732 aa14.99□□□□□ -0.01
CALCOCO1-213ENST00000549349 LRRC9Q6ZRR7 1453 aa14.99□□□□□ -0.01
CALCOCO1-213ENST00000549349 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
CALCOCO1-213ENST00000549349 MYO5CQ9NQX4 1742 aa14.98□□□□□ -0.01
CALCOCO1-213ENST00000549349 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
CALCOCO1-213ENST00000549349 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
CALCOCO1-213ENST00000549349 CD109Q6YHK3 1445 aa14.94□□□□□ -0.02
CALCOCO1-213ENST00000549349 NCOA2Q15596 1464 aa14.91□□□□□ -0.02
CALCOCO1-213ENST00000549349 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
CALCOCO1-213ENST00000549349 ITSN2Q9NZM3 1697 aa14.87□□□□□ -0.03
CALCOCO1-213ENST00000549349 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
CALCOCO1-213ENST00000549349 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
CALCOCO1-213ENST00000549349 PLCH2O75038 1416 aa14.86□□□□□ -0.03
CALCOCO1-213ENST00000549349 ARHGAP5Q13017 1502 aa14.86□□□□□ -0.03
CALCOCO1-213ENST00000549349 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms