RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
PFDN5-206ENST00000548984 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
PFDN5-206ENST00000548984 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
PFDN5-206ENST00000548984 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
PFDN5-206ENST00000548984 IQGAP2Q13576 1575 aa17.39■□□□□ 0.37
PFDN5-206ENST00000548984 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
PFDN5-206ENST00000548984 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
PFDN5-206ENST00000548984 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
PFDN5-206ENST00000548984 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
PFDN5-206ENST00000548984 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
PFDN5-206ENST00000548984 EEA1Q15075 1411 aa17.28■□□□□ 0.36
PFDN5-206ENST00000548984 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.36
PFDN5-206ENST00000548984 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.35
PFDN5-206ENST00000548984 PTPRGP23470 1445 aa17.25■□□□□ 0.35
PFDN5-206ENST00000548984 MAPKBP1O60336 1514 aa17.25■□□□□ 0.35
PFDN5-206ENST00000548984 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
PFDN5-206ENST00000548984 KIAA0556O60303 1618 aa17.23■□□□□ 0.35
PFDN5-206ENST00000548984 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
PFDN5-206ENST00000548984 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
PFDN5-206ENST00000548984 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
PFDN5-206ENST00000548984 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
PFDN5-206ENST00000548984 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
PFDN5-206ENST00000548984 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
PFDN5-206ENST00000548984 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
PFDN5-206ENST00000548984 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
PFDN5-206ENST00000548984 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
PFDN5-206ENST00000548984 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
PFDN5-206ENST00000548984 KIF21BO75037 1637 aa17.1■□□□□ 0.33
PFDN5-206ENST00000548984 KDM5BQ9UGL1 1544 aa17.08■□□□□ 0.32
PFDN5-206ENST00000548984 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
PFDN5-206ENST00000548984 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
PFDN5-206ENST00000548984 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
PFDN5-206ENST00000548984 FAM69CQ0P6D2 419 aa17.05■□□□□ 0.32
PFDN5-206ENST00000548984 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
PFDN5-206ENST00000548984 ZCCHC11Q5TAX3 1644 aaKnown RBP17.04■□□□□ 0.32
PFDN5-206ENST00000548984 ABCA8O94911 1581 aa17.04■□□□□ 0.32
PFDN5-206ENST00000548984 GLI2P10070 1586 aa17.02■□□□□ 0.32
PFDN5-206ENST00000548984 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
PFDN5-206ENST00000548984 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
PFDN5-206ENST00000548984 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
PFDN5-206ENST00000548984 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
PFDN5-206ENST00000548984 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
PFDN5-206ENST00000548984 KDM6BO15054 1643 aa16.92■□□□□ 0.3
PFDN5-206ENST00000548984 RAPGEF6Q8TEU7 1601 aa16.92■□□□□ 0.3
PFDN5-206ENST00000548984 MAP3K4Q9Y6R4 1608 aa16.92■□□□□ 0.3
PFDN5-206ENST00000548984 PPRC1Q5VV67 1664 aaKnown RBP16.9■□□□□ 0.3
PFDN5-206ENST00000548984 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
PFDN5-206ENST00000548984 TEX14Q8IWB6 1497 aa16.88■□□□□ 0.29
PFDN5-206ENST00000548984 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
PFDN5-206ENST00000548984 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
PFDN5-206ENST00000548984 ATP10BO94823 1461 aa16.85■□□□□ 0.29
PFDN5-206ENST00000548984 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
PFDN5-206ENST00000548984 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
PFDN5-206ENST00000548984 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
PFDN5-206ENST00000548984 MAGI3Q5TCQ9 1506 aa16.8■□□□□ 0.28
PFDN5-206ENST00000548984 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
PFDN5-206ENST00000548984 CD109Q6YHK3 1445 aa16.79■□□□□ 0.28
PFDN5-206ENST00000548984 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
PFDN5-206ENST00000548984 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
PFDN5-206ENST00000548984 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
PFDN5-206ENST00000548984 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
PFDN5-206ENST00000548984 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
PFDN5-206ENST00000548984 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
PFDN5-206ENST00000548984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
PFDN5-206ENST00000548984 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
PFDN5-206ENST00000548984 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
PFDN5-206ENST00000548984 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
PFDN5-206ENST00000548984 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
PFDN5-206ENST00000548984 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
PFDN5-206ENST00000548984 NEO1Q92859 1461 aa16.67■□□□□ 0.26
PFDN5-206ENST00000548984 ARAP3Q8WWN8 1544 aa16.66■□□□□ 0.26
PFDN5-206ENST00000548984 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
PFDN5-206ENST00000548984 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
PFDN5-206ENST00000548984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.62■□□□□ 0.253e-9■□□□□ 10.9
PFDN5-206ENST00000548984 CLIP1P30622 1438 aa16.62■□□□□ 0.25
PFDN5-206ENST00000548984 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
PFDN5-206ENST00000548984 PCF11O94913 1555 aaKnown RBP16.61■□□□□ 0.25
PFDN5-206ENST00000548984 TTC37Q6PGP7 1564 aa16.61■□□□□ 0.25
PFDN5-206ENST00000548984 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
PFDN5-206ENST00000548984 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
PFDN5-206ENST00000548984 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
PFDN5-206ENST00000548984 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
PFDN5-206ENST00000548984 KIF14Q15058 1648 aa16.58■□□□□ 0.24
PFDN5-206ENST00000548984 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
PFDN5-206ENST00000548984 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
PFDN5-206ENST00000548984 FANCAO15360 1455 aa16.56■□□□□ 0.24
PFDN5-206ENST00000548984 MYO5CQ9NQX4 1742 aa16.54■□□□□ 0.24
PFDN5-206ENST00000548984 FRMPD1Q5SYB0 1578 aa16.53■□□□□ 0.24
PFDN5-206ENST00000548984 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
PFDN5-206ENST00000548984 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
PFDN5-206ENST00000548984 DENND4BO75064 1496 aaPredicted RBP16.52■□□□□ 0.23
PFDN5-206ENST00000548984 PLCH2O75038 1416 aa16.52■□□□□ 0.23
PFDN5-206ENST00000548984 KDM4FA0A1W2PPD8 638 aa16.5■□□□□ 0.23
PFDN5-206ENST00000548984 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
PFDN5-206ENST00000548984 RICTORQ6R327 1708 aa16.5■□□□□ 0.23
PFDN5-206ENST00000548984 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
PFDN5-206ENST00000548984 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
PFDN5-206ENST00000548984 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
PFDN5-206ENST00000548984 PREX2Q70Z35 1606 aa16.45■□□□□ 0.22
PFDN5-206ENST00000548984 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms