RNA–Protein interactions for RNA: ENST00000548921.5

SCRN3-213, Transcript of secernin 3, humanhuman

TSL 1 (best)

Gene SCRN3, Length 1,674 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-213ENST00000548921 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
SCRN3-213ENST00000548921 CHD1O14646 1710 aa18.89■□□□□ 0.61
SCRN3-213ENST00000548921 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
SCRN3-213ENST00000548921 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
SCRN3-213ENST00000548921 FBLN2P98095 1184 aa18.87■□□□□ 0.61
SCRN3-213ENST00000548921 IQGAP2Q13576 1575 aa18.87■□□□□ 0.61
SCRN3-213ENST00000548921 NUP160Q12769 1436 aa18.86■□□□□ 0.61
SCRN3-213ENST00000548921 KIAA0586Q9BVV6 1533 aa18.86■□□□□ 0.61
SCRN3-213ENST00000548921 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
SCRN3-213ENST00000548921 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.61
SCRN3-213ENST00000548921 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
SCRN3-213ENST00000548921 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
SCRN3-213ENST00000548921 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
SCRN3-213ENST00000548921 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
SCRN3-213ENST00000548921 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
SCRN3-213ENST00000548921 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
SCRN3-213ENST00000548921 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
SCRN3-213ENST00000548921 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
SCRN3-213ENST00000548921 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
SCRN3-213ENST00000548921 SHROOM2Q13796 1616 aa18.66■□□□□ 0.58
SCRN3-213ENST00000548921 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
SCRN3-213ENST00000548921 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
SCRN3-213ENST00000548921 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
SCRN3-213ENST00000548921 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
SCRN3-213ENST00000548921 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.57
SCRN3-213ENST00000548921 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
SCRN3-213ENST00000548921 APLP2Q06481 763 aa18.55■□□□□ 0.56
SCRN3-213ENST00000548921 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
SCRN3-213ENST00000548921 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
SCRN3-213ENST00000548921 PPARGC1BQ86YN6 1023 aaKnown RBP18.53■□□□□ 0.56
SCRN3-213ENST00000548921 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
SCRN3-213ENST00000548921 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
SCRN3-213ENST00000548921 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
SCRN3-213ENST00000548921 ERCC6L2Q5T890 1561 aa18.5■□□□□ 0.55
SCRN3-213ENST00000548921 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
SCRN3-213ENST00000548921 RAPGEF6Q8TEU7 1601 aa18.48■□□□□ 0.55
SCRN3-213ENST00000548921 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
SCRN3-213ENST00000548921 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
SCRN3-213ENST00000548921 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
SCRN3-213ENST00000548921 ABCA8O94911 1581 aa18.44■□□□□ 0.54
SCRN3-213ENST00000548921 PTPRGP23470 1445 aa18.44■□□□□ 0.54
SCRN3-213ENST00000548921 PLB1Q6P1J6 1458 aa18.43■□□□□ 0.54
SCRN3-213ENST00000548921 CCDC18Q5T9S5 1454 aa18.42■□□□□ 0.54
SCRN3-213ENST00000548921 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
SCRN3-213ENST00000548921 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
SCRN3-213ENST00000548921 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
SCRN3-213ENST00000548921 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
SCRN3-213ENST00000548921 CDK13Q14004 1512 aaKnown RBP18.36■□□□□ 0.53
SCRN3-213ENST00000548921 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
SCRN3-213ENST00000548921 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
SCRN3-213ENST00000548921 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
SCRN3-213ENST00000548921 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
SCRN3-213ENST00000548921 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
SCRN3-213ENST00000548921 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
SCRN3-213ENST00000548921 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
SCRN3-213ENST00000548921 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
SCRN3-213ENST00000548921 ATP10BO94823 1461 aa18.29■□□□□ 0.52
SCRN3-213ENST00000548921 SUPT6HQ7KZ85 1726 aaKnown RBP18.27■□□□□ 0.52
SCRN3-213ENST00000548921 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
SCRN3-213ENST00000548921 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
SCRN3-213ENST00000548921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
SCRN3-213ENST00000548921 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
SCRN3-213ENST00000548921 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
SCRN3-213ENST00000548921 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
SCRN3-213ENST00000548921 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
SCRN3-213ENST00000548921 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
SCRN3-213ENST00000548921 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
SCRN3-213ENST00000548921 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.5
SCRN3-213ENST00000548921 ZCCHC11Q5TAX3 1644 aaKnown RBP18.2■□□□□ 0.5
SCRN3-213ENST00000548921 RIMBP3CA6NJZ7 1639 aa18.19■□□□□ 0.5
SCRN3-213ENST00000548921 RIMBP3BA6NNM3 1639 aa18.19■□□□□ 0.5
SCRN3-213ENST00000548921 RIMBP3Q9UFD9 1639 aa18.19■□□□□ 0.5
SCRN3-213ENST00000548921 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
SCRN3-213ENST00000548921 KIF14Q15058 1648 aa18.14■□□□□ 0.5
SCRN3-213ENST00000548921 CCNB3Q8WWL7 1395 aa18.14■□□□□ 0.49
SCRN3-213ENST00000548921 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.49
SCRN3-213ENST00000548921 FGD6Q6ZV73 1430 aa18.11■□□□□ 0.49
SCRN3-213ENST00000548921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.08■□□□□ 0.48
SCRN3-213ENST00000548921 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
SCRN3-213ENST00000548921 ITSN2Q9NZM3 1697 aa18.07■□□□□ 0.48
SCRN3-213ENST00000548921 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
SCRN3-213ENST00000548921 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
SCRN3-213ENST00000548921 CDC42BPAQ5VT25 1732 aa18.06■□□□□ 0.48
SCRN3-213ENST00000548921 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
SCRN3-213ENST00000548921 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
SCRN3-213ENST00000548921 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
SCRN3-213ENST00000548921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCRN3-213ENST00000548921 WDR7Q9Y4E6 1490 aa18.02■□□□□ 0.48
SCRN3-213ENST00000548921 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.47
SCRN3-213ENST00000548921 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.47
SCRN3-213ENST00000548921 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
SCRN3-213ENST00000548921 ASXL2Q76L83 1435 aa18■□□□□ 0.47
SCRN3-213ENST00000548921 CDC42BPBQ9Y5S2 1711 aa17.99■□□□□ 0.47
SCRN3-213ENST00000548921 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
SCRN3-213ENST00000548921 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
SCRN3-213ENST00000548921 MYO5CQ9NQX4 1742 aa17.98■□□□□ 0.47
SCRN3-213ENST00000548921 CFDP1Q9UEE9 299 aaPredicted RBP17.96■□□□□ 0.47
SCRN3-213ENST00000548921 MAPKBP1O60336 1514 aa17.95■□□□□ 0.46
SCRN3-213ENST00000548921 ABCA9Q8IUA7 1624 aa17.94■□□□□ 0.46
SCRN3-213ENST00000548921 CAMSAP2Q08AD1 1489 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms