RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.47
PDE1B-205ENST00000548855 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.47
PDE1B-205ENST00000548855 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
PDE1B-205ENST00000548855 CLSPNQ9HAW4 1339 aa18.01■□□□□ 0.47
PDE1B-205ENST00000548855 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
PDE1B-205ENST00000548855 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
PDE1B-205ENST00000548855 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
PDE1B-205ENST00000548855 TDRD9Q8NDG6 1382 aaKnown RBP17.98■□□□□ 0.47
PDE1B-205ENST00000548855 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
PDE1B-205ENST00000548855 KDM2AQ9Y2K7 1162 aa17.98■□□□□ 0.47
PDE1B-205ENST00000548855 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDE1B-205ENST00000548855 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
PDE1B-205ENST00000548855 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
PDE1B-205ENST00000548855 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
PDE1B-205ENST00000548855 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
PDE1B-205ENST00000548855 FKBP8Q14318 412 aa17.91■□□□□ 0.46
PDE1B-205ENST00000548855 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
PDE1B-205ENST00000548855 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
PDE1B-205ENST00000548855 TMC1Q8TDI8 760 aa17.86■□□□□ 0.45
PDE1B-205ENST00000548855 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
PDE1B-205ENST00000548855 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
PDE1B-205ENST00000548855 FMN1Q68DA7 1419 aa17.83■□□□□ 0.45
PDE1B-205ENST00000548855 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.45
PDE1B-205ENST00000548855 SETD5Q9C0A6 1442 aa17.83■□□□□ 0.44
PDE1B-205ENST00000548855 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
PDE1B-205ENST00000548855 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
PDE1B-205ENST00000548855 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
PDE1B-205ENST00000548855 NEFMP07197 916 aa17.8■□□□□ 0.44
PDE1B-205ENST00000548855 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
PDE1B-205ENST00000548855 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
PDE1B-205ENST00000548855 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.44
PDE1B-205ENST00000548855 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
PDE1B-205ENST00000548855 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
PDE1B-205ENST00000548855 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
PDE1B-205ENST00000548855 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
PDE1B-205ENST00000548855 IGF1RP08069 1367 aa17.7■□□□□ 0.42
PDE1B-205ENST00000548855 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
PDE1B-205ENST00000548855 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
PDE1B-205ENST00000548855 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
PDE1B-205ENST00000548855 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
PDE1B-205ENST00000548855 WDR43Q15061 677 aaKnown RBP eCLIP17.66■□□□□ 0.42
PDE1B-205ENST00000548855 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
PDE1B-205ENST00000548855 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
PDE1B-205ENST00000548855 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
PDE1B-205ENST00000548855 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
PDE1B-205ENST00000548855 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
PDE1B-205ENST00000548855 FOXD1Q16676 465 aa17.59■□□□□ 0.41
PDE1B-205ENST00000548855 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
PDE1B-205ENST00000548855 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
PDE1B-205ENST00000548855 CFTRP13569 1480 aa17.58■□□□□ 0.4
PDE1B-205ENST00000548855 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.4
PDE1B-205ENST00000548855 JPH4Q96JJ6 628 aa17.57■□□□□ 0.4
PDE1B-205ENST00000548855 PKD2Q13563 968 aa17.57■□□□□ 0.4
PDE1B-205ENST00000548855 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
PDE1B-205ENST00000548855 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
PDE1B-205ENST00000548855 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
PDE1B-205ENST00000548855 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
PDE1B-205ENST00000548855 BCL11AQ9H165 835 aa17.55■□□□□ 0.4
PDE1B-205ENST00000548855 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
PDE1B-205ENST00000548855 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
PDE1B-205ENST00000548855 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
PDE1B-205ENST00000548855 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
PDE1B-205ENST00000548855 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
PDE1B-205ENST00000548855 KIF21BO75037 1637 aa17.52■□□□□ 0.4
PDE1B-205ENST00000548855 CCDC18Q5T9S5 1454 aa17.52■□□□□ 0.39
PDE1B-205ENST00000548855 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.39
PDE1B-205ENST00000548855 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.39
PDE1B-205ENST00000548855 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.39
PDE1B-205ENST00000548855 ANKRD30AQ9BXX3 1397 aa17.5■□□□□ 0.39
PDE1B-205ENST00000548855 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
PDE1B-205ENST00000548855 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
PDE1B-205ENST00000548855 NUP155O75694 1391 aa17.48■□□□□ 0.39
PDE1B-205ENST00000548855 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
PDE1B-205ENST00000548855 EFCAB2Q5VUJ9 269 aa17.47■□□□□ 0.39
PDE1B-205ENST00000548855 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
PDE1B-205ENST00000548855 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
PDE1B-205ENST00000548855 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
PDE1B-205ENST00000548855 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
PDE1B-205ENST00000548855 KANK1Q14678 1352 aa17.44■□□□□ 0.38
PDE1B-205ENST00000548855 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
PDE1B-205ENST00000548855 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
PDE1B-205ENST00000548855 TOP2BQ02880 1626 aa17.42■□□□□ 0.38
PDE1B-205ENST00000548855 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
PDE1B-205ENST00000548855 TMF1P82094 1093 aa17.4■□□□□ 0.38
PDE1B-205ENST00000548855 ARAP1Q96P48 1450 aa17.4■□□□□ 0.38
PDE1B-205ENST00000548855 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.38
PDE1B-205ENST00000548855 CUX1P39880 1505 aa17.39■□□□□ 0.37
PDE1B-205ENST00000548855 NESP48681 1621 aa17.39■□□□□ 0.37
PDE1B-205ENST00000548855 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDE1B-205ENST00000548855 ARID4BQ4LE39 1312 aaPredicted RBP17.38■□□□□ 0.37
PDE1B-205ENST00000548855 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
PDE1B-205ENST00000548855 PHLDB1Q86UU1 1377 aa17.37■□□□□ 0.37
PDE1B-205ENST00000548855 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
PDE1B-205ENST00000548855 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
PDE1B-205ENST00000548855 GGT6Q6P531 493 aa17.35■□□□□ 0.37
PDE1B-205ENST00000548855 PTPRGP23470 1445 aa17.35■□□□□ 0.37
PDE1B-205ENST00000548855 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
PDE1B-205ENST00000548855 POGKQ9P215 609 aa17.32■□□□□ 0.36
PDE1B-205ENST00000548855 CASKIN1Q8WXD9 1431 aa17.32■□□□□ 0.36
PDE1B-205ENST00000548855 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms