RNA–Protein interactions for RNA: ENST00000548324.5

ACSS3-204, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

TSL 2

Gene ACSS3, Length 2,214 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-204ENST00000548324 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
ACSS3-204ENST00000548324 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.31
ACSS3-204ENST00000548324 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
ACSS3-204ENST00000548324 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
ACSS3-204ENST00000548324 PDE4CQ08493 712 aa13.13□□□□□ -0.31
ACSS3-204ENST00000548324 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
ACSS3-204ENST00000548324 PKD2Q13563 968 aa13.1□□□□□ -0.31
ACSS3-204ENST00000548324 NECTIN2Q92692 538 aa13.08□□□□□ -0.32
ACSS3-204ENST00000548324 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
ACSS3-204ENST00000548324 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
ACSS3-204ENST00000548324 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
ACSS3-204ENST00000548324 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
ACSS3-204ENST00000548324 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
ACSS3-204ENST00000548324 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
ACSS3-204ENST00000548324 TAF7LQ5H9L4 462 aa13□□□□□ -0.33
ACSS3-204ENST00000548324 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
ACSS3-204ENST00000548324 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
ACSS3-204ENST00000548324 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
ACSS3-204ENST00000548324 BAZ1BQ9UIG0 1483 aaKnown RBP12.99□□□□□ -0.33
ACSS3-204ENST00000548324 CUX2O14529 1486 aa12.97□□□□□ -0.33
ACSS3-204ENST00000548324 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
ACSS3-204ENST00000548324 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
ACSS3-204ENST00000548324 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
ACSS3-204ENST00000548324 POLR3GLQ9BT43 218 aa12.91□□□□□ -0.34
ACSS3-204ENST00000548324 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
ACSS3-204ENST00000548324 NEFLP07196 543 aa12.88□□□□□ -0.35
ACSS3-204ENST00000548324 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
ACSS3-204ENST00000548324 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
ACSS3-204ENST00000548324 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
ACSS3-204ENST00000548324 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
ACSS3-204ENST00000548324 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
ACSS3-204ENST00000548324 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
ACSS3-204ENST00000548324 KCTD17Q8N5Z5 321 aa12.79□□□□□ -0.36
ACSS3-204ENST00000548324 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
ACSS3-204ENST00000548324 RAD21O60216 631 aa12.77□□□□□ -0.36
ACSS3-204ENST00000548324 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
ACSS3-204ENST00000548324 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
ACSS3-204ENST00000548324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
ACSS3-204ENST00000548324 NESP48681 1621 aa12.73□□□□□ -0.37
ACSS3-204ENST00000548324 RGS22Q8NE09 1264 aa12.73□□□□□ -0.37
ACSS3-204ENST00000548324 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
ACSS3-204ENST00000548324 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
ACSS3-204ENST00000548324 MTMR7Q9Y216 660 aa12.7□□□□□ -0.38
ACSS3-204ENST00000548324 RBM25P49756 843 aaKnown RBP12.69□□□□□ -0.38
ACSS3-204ENST00000548324 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
ACSS3-204ENST00000548324 CFTRP13569 1480 aa12.67□□□□□ -0.38
ACSS3-204ENST00000548324 FOXD4L5Q5VV16 416 aaPredicted RBP12.66□□□□□ -0.38
ACSS3-204ENST00000548324 FOXD4L4Q8WXT5 416 aaPredicted RBP12.66□□□□□ -0.38
ACSS3-204ENST00000548324 BCCIPQ9P287 314 aaKnown RBP eCLIP12.65□□□□□ -0.38
ACSS3-204ENST00000548324 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
ACSS3-204ENST00000548324 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
ACSS3-204ENST00000548324 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
ACSS3-204ENST00000548324 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
ACSS3-204ENST00000548324 CENPBP07199 599 aaPredicted RBP12.6□□□□□ -0.39
ACSS3-204ENST00000548324 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
ACSS3-204ENST00000548324 FGD1P98174 961 aa12.59□□□□□ -0.39
ACSS3-204ENST00000548324 ABCC8Q09428 1581 aa12.59□□□□□ -0.39
ACSS3-204ENST00000548324 APBB1O00213 710 aa12.58□□□□□ -0.39
ACSS3-204ENST00000548324 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.39
ACSS3-204ENST00000548324 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
ACSS3-204ENST00000548324 ATXN8OSP0DMR3 200 aa12.58□□□□□ -0.4
ACSS3-204ENST00000548324 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
ACSS3-204ENST00000548324 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
ACSS3-204ENST00000548324 BRPF3Q9ULD4 1205 aa12.54□□□□□ -0.4
ACSS3-204ENST00000548324 RGL2O15211 777 aa12.53□□□□□ -0.4
ACSS3-204ENST00000548324 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
ACSS3-204ENST00000548324 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
ACSS3-204ENST00000548324 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
ACSS3-204ENST00000548324 LMOD2Q6P5Q4 547 aa12.52□□□□□ -0.41
ACSS3-204ENST00000548324 ZNF592Q92610 1267 aa12.52□□□□□ -0.41
ACSS3-204ENST00000548324 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
ACSS3-204ENST00000548324 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
ACSS3-204ENST00000548324 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
ACSS3-204ENST00000548324 RSPH4AQ5TD94 716 aa12.48□□□□□ -0.41
ACSS3-204ENST00000548324 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
ACSS3-204ENST00000548324 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
ACSS3-204ENST00000548324 AEBP1Q8IUX7 1158 aa12.47□□□□□ -0.41
ACSS3-204ENST00000548324 CUX1P39880 1505 aa12.47□□□□□ -0.41
ACSS3-204ENST00000548324 TICAM2Q86XR7 235 aa12.46□□□□□ -0.41
ACSS3-204ENST00000548324 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
ACSS3-204ENST00000548324 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.46□□□□□ -0.41
ACSS3-204ENST00000548324 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
ACSS3-204ENST00000548324 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
ACSS3-204ENST00000548324 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
ACSS3-204ENST00000548324 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
ACSS3-204ENST00000548324 TMCO4Q5TGY1 634 aa12.44□□□□□ -0.42
ACSS3-204ENST00000548324 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
ACSS3-204ENST00000548324 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
ACSS3-204ENST00000548324 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
ACSS3-204ENST00000548324 CERS3Q8IU89 383 aa12.42□□□□□ -0.42
ACSS3-204ENST00000548324 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
ACSS3-204ENST00000548324 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.42
ACSS3-204ENST00000548324 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
ACSS3-204ENST00000548324 SLC24A3Q9HC58 644 aa12.4□□□□□ -0.42
ACSS3-204ENST00000548324 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
ACSS3-204ENST00000548324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
ACSS3-204ENST00000548324 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
ACSS3-204ENST00000548324 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
ACSS3-204ENST00000548324 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
ACSS3-204ENST00000548324 PSMD1Q99460 953 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms