RNA–Protein interactions for RNA: ENST00000548169.2

ATP2A2-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 2

Gene ATP2A2, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-207ENST00000548169 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
ATP2A2-207ENST00000548169 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
ATP2A2-207ENST00000548169 PKD2Q13563 968 aa13.08□□□□□ -0.32
ATP2A2-207ENST00000548169 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
ATP2A2-207ENST00000548169 PDE4CQ08493 712 aa13.06□□□□□ -0.32
ATP2A2-207ENST00000548169 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
ATP2A2-207ENST00000548169 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
ATP2A2-207ENST00000548169 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
ATP2A2-207ENST00000548169 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
ATP2A2-207ENST00000548169 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
ATP2A2-207ENST00000548169 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
ATP2A2-207ENST00000548169 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
ATP2A2-207ENST00000548169 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
ATP2A2-207ENST00000548169 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
ATP2A2-207ENST00000548169 CFTRP13569 1480 aa12.93□□□□□ -0.34
ATP2A2-207ENST00000548169 ZBTB7CA1YPR0 619 aa12.9□□□□□ -0.34
ATP2A2-207ENST00000548169 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
ATP2A2-207ENST00000548169 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
ATP2A2-207ENST00000548169 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
ATP2A2-207ENST00000548169 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
ATP2A2-207ENST00000548169 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
ATP2A2-207ENST00000548169 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
ATP2A2-207ENST00000548169 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
ATP2A2-207ENST00000548169 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
ATP2A2-207ENST00000548169 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
ATP2A2-207ENST00000548169 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
ATP2A2-207ENST00000548169 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
ATP2A2-207ENST00000548169 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
ATP2A2-207ENST00000548169 NESP48681 1621 aa12.79□□□□□ -0.36
ATP2A2-207ENST00000548169 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
ATP2A2-207ENST00000548169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
ATP2A2-207ENST00000548169 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
ATP2A2-207ENST00000548169 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
ATP2A2-207ENST00000548169 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
ATP2A2-207ENST00000548169 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
ATP2A2-207ENST00000548169 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
ATP2A2-207ENST00000548169 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
ATP2A2-207ENST00000548169 RAD21O60216 631 aa12.72□□□□□ -0.37
ATP2A2-207ENST00000548169 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
ATP2A2-207ENST00000548169 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
ATP2A2-207ENST00000548169 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
ATP2A2-207ENST00000548169 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
ATP2A2-207ENST00000548169 FOXD4L5Q5VV16 416 aaPredicted RBP12.7□□□□□ -0.38
ATP2A2-207ENST00000548169 FOXD4L4Q8WXT5 416 aaPredicted RBP12.7□□□□□ -0.38
ATP2A2-207ENST00000548169 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
ATP2A2-207ENST00000548169 NEFLP07196 543 aa12.69□□□□□ -0.38
ATP2A2-207ENST00000548169 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
ATP2A2-207ENST00000548169 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
ATP2A2-207ENST00000548169 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
ATP2A2-207ENST00000548169 CUX1P39880 1505 aa12.68□□□□□ -0.38
ATP2A2-207ENST00000548169 RBM25P49756 843 aaKnown RBP12.66□□□□□ -0.38
ATP2A2-207ENST00000548169 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
ATP2A2-207ENST00000548169 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
ATP2A2-207ENST00000548169 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
ATP2A2-207ENST00000548169 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
ATP2A2-207ENST00000548169 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
ATP2A2-207ENST00000548169 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
ATP2A2-207ENST00000548169 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
ATP2A2-207ENST00000548169 PIAS4Q8N2W9 510 aaPredicted RBP12.6□□□□□ -0.39
ATP2A2-207ENST00000548169 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
ATP2A2-207ENST00000548169 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
ATP2A2-207ENST00000548169 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
ATP2A2-207ENST00000548169 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
ATP2A2-207ENST00000548169 APBB1O00213 710 aa12.57□□□□□ -0.4
ATP2A2-207ENST00000548169 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
ATP2A2-207ENST00000548169 WDR62O43379 1518 aa12.56□□□□□ -0.4
ATP2A2-207ENST00000548169 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
ATP2A2-207ENST00000548169 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
ATP2A2-207ENST00000548169 RGL2O15211 777 aa12.54□□□□□ -0.4
ATP2A2-207ENST00000548169 EEA1Q15075 1411 aa12.53□□□□□ -0.4
ATP2A2-207ENST00000548169 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
ATP2A2-207ENST00000548169 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
ATP2A2-207ENST00000548169 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
ATP2A2-207ENST00000548169 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
ATP2A2-207ENST00000548169 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
ATP2A2-207ENST00000548169 SOGA1O94964 1423 aa12.49□□□□□ -0.41
ATP2A2-207ENST00000548169 CWC22Q9HCG8 908 aaKnown RBP12.48□□□□□ -0.41
ATP2A2-207ENST00000548169 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
ATP2A2-207ENST00000548169 FGD1P98174 961 aa12.48□□□□□ -0.41
ATP2A2-207ENST00000548169 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
ATP2A2-207ENST00000548169 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
ATP2A2-207ENST00000548169 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
ATP2A2-207ENST00000548169 FAM177A1Q8N128 213 aaPredicted RBP12.47□□□□□ -0.41
ATP2A2-207ENST00000548169 RUSC2Q8N2Y8 1516 aa12.46□□□□□ -0.42
ATP2A2-207ENST00000548169 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
ATP2A2-207ENST00000548169 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
ATP2A2-207ENST00000548169 MAPK8IP2Q13387 824 aaPredicted RBP12.45□□□□□ -0.42
ATP2A2-207ENST00000548169 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
ATP2A2-207ENST00000548169 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
ATP2A2-207ENST00000548169 CUX2O14529 1486 aa12.44□□□□□ -0.42
ATP2A2-207ENST00000548169 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
ATP2A2-207ENST00000548169 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
ATP2A2-207ENST00000548169 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
ATP2A2-207ENST00000548169 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
ATP2A2-207ENST00000548169 BCCIPQ9P287 314 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATP2A2-207ENST00000548169 SLC24A3Q9HC58 644 aa12.4□□□□□ -0.42
ATP2A2-207ENST00000548169 KIF21BO75037 1637 aa12.4□□□□□ -0.42
ATP2A2-207ENST00000548169 CCDC82Q8N4S0 544 aa12.37□□□□□ -0.43
ATP2A2-207ENST00000548169 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
ATP2A2-207ENST00000548169 CERS3Q8IU89 383 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms