RNA–Protein interactions for RNA: ENST00000547818.5

CACNB3-207, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 904 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-207ENST00000547818 CLIP1P30622 1438 aa19.88■□□□□ 0.77
CACNB3-207ENST00000547818 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
CACNB3-207ENST00000547818 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
CACNB3-207ENST00000547818 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.77
CACNB3-207ENST00000547818 CHD1O14646 1710 aa19.82■□□□□ 0.76
CACNB3-207ENST00000547818 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
CACNB3-207ENST00000547818 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-207ENST00000547818 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
CACNB3-207ENST00000547818 CTTNBP2Q8WZ74 1663 aa19.74■□□□□ 0.75
CACNB3-207ENST00000547818 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
CACNB3-207ENST00000547818 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
CACNB3-207ENST00000547818 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
CACNB3-207ENST00000547818 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
CACNB3-207ENST00000547818 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
CACNB3-207ENST00000547818 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
CACNB3-207ENST00000547818 IQGAP2Q13576 1575 aa19.58■□□□□ 0.73
CACNB3-207ENST00000547818 CLASP1Q7Z460 1538 aa19.58■□□□□ 0.73
CACNB3-207ENST00000547818 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
CACNB3-207ENST00000547818 APLP2Q06481 763 aa19.57■□□□□ 0.72
CACNB3-207ENST00000547818 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
CACNB3-207ENST00000547818 SAMD9Q5K651 1589 aa19.56■□□□□ 0.72
CACNB3-207ENST00000547818 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
CACNB3-207ENST00000547818 FMN1Q68DA7 1419 aa19.52■□□□□ 0.72
CACNB3-207ENST00000547818 UGGT2Q9NYU1 1516 aa19.52■□□□□ 0.72
CACNB3-207ENST00000547818 NUP160Q12769 1436 aa19.51■□□□□ 0.71
CACNB3-207ENST00000547818 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
CACNB3-207ENST00000547818 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
CACNB3-207ENST00000547818 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
CACNB3-207ENST00000547818 FHOD3Q2V2M9 1422 aa19.43■□□□□ 0.7
CACNB3-207ENST00000547818 CASKIN1Q8WXD9 1431 aa19.43■□□□□ 0.7
CACNB3-207ENST00000547818 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
CACNB3-207ENST00000547818 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
CACNB3-207ENST00000547818 KIAA0556O60303 1618 aa19.36■□□□□ 0.69
CACNB3-207ENST00000547818 PCF11O94913 1555 aaKnown RBP19.36■□□□□ 0.69
CACNB3-207ENST00000547818 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
CACNB3-207ENST00000547818 TIAM1Q13009 1591 aa19.35■□□□□ 0.69
CACNB3-207ENST00000547818 DISP1Q96F81 1524 aa19.34■□□□□ 0.69
CACNB3-207ENST00000547818 P3H3Q8IVL6 736 aa19.33■□□□□ 0.68
CACNB3-207ENST00000547818 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.68
CACNB3-207ENST00000547818 CCDC18Q5T9S5 1454 aa19.3■□□□□ 0.68
CACNB3-207ENST00000547818 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
CACNB3-207ENST00000547818 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
CACNB3-207ENST00000547818 LRRC9Q6ZRR7 1453 aa19.26■□□□□ 0.67
CACNB3-207ENST00000547818 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
CACNB3-207ENST00000547818 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
CACNB3-207ENST00000547818 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
CACNB3-207ENST00000547818 KDM4FA0A1W2PPD8 638 aa19.19■□□□□ 0.66
CACNB3-207ENST00000547818 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
CACNB3-207ENST00000547818 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
CACNB3-207ENST00000547818 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
CACNB3-207ENST00000547818 EHBP1L1Q8N3D4 1523 aa19.17■□□□□ 0.66
CACNB3-207ENST00000547818 FAM69CQ0P6D2 419 aa19.17■□□□□ 0.66
CACNB3-207ENST00000547818 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
CACNB3-207ENST00000547818 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
CACNB3-207ENST00000547818 KIF13AQ9H1H9 1805 aa19.15■□□□□ 0.66
CACNB3-207ENST00000547818 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
CACNB3-207ENST00000547818 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
CACNB3-207ENST00000547818 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
CACNB3-207ENST00000547818 CDK11AQ9UQ88 783 aaPredicted RBP19.1■□□□□ 0.65
CACNB3-207ENST00000547818 ABCA8O94911 1581 aa19.1■□□□□ 0.65
CACNB3-207ENST00000547818 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
CACNB3-207ENST00000547818 PTPRGP23470 1445 aa19.09■□□□□ 0.65
CACNB3-207ENST00000547818 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.64
CACNB3-207ENST00000547818 SUPT6HQ7KZ85 1726 aaKnown RBP19.07■□□□□ 0.64
CACNB3-207ENST00000547818 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
CACNB3-207ENST00000547818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
CACNB3-207ENST00000547818 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
CACNB3-207ENST00000547818 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
CACNB3-207ENST00000547818 ABCC10Q5T3U5 1492 aa19.02■□□□□ 0.63
CACNB3-207ENST00000547818 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
CACNB3-207ENST00000547818 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
CACNB3-207ENST00000547818 NCOA2Q15596 1464 aa19.01■□□□□ 0.63
CACNB3-207ENST00000547818 PHLDB1Q86UU1 1377 aa19■□□□□ 0.63
CACNB3-207ENST00000547818 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
CACNB3-207ENST00000547818 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
CACNB3-207ENST00000547818 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
CACNB3-207ENST00000547818 MAGI3Q5TCQ9 1506 aa18.96■□□□□ 0.63
CACNB3-207ENST00000547818 ABCC2Q92887 1545 aa18.96■□□□□ 0.63
CACNB3-207ENST00000547818 FGD6Q6ZV73 1430 aa18.95■□□□□ 0.62
CACNB3-207ENST00000547818 MIA2Q96PC5 1412 aa18.95■□□□□ 0.62
CACNB3-207ENST00000547818 ADCY10Q96PN6 1610 aa18.93■□□□□ 0.62
CACNB3-207ENST00000547818 ATP10BO94823 1461 aa18.92■□□□□ 0.62
CACNB3-207ENST00000547818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-207ENST00000547818 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-207ENST00000547818 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
CACNB3-207ENST00000547818 DIP2BQ9P265 1576 aa18.9■□□□□ 0.62
CACNB3-207ENST00000547818 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
CACNB3-207ENST00000547818 HRCP23327 699 aa18.9■□□□□ 0.62
CACNB3-207ENST00000547818 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
CACNB3-207ENST00000547818 KDM6BO15054 1643 aa18.89■□□□□ 0.61
CACNB3-207ENST00000547818 TCOF1Q13428 1488 aaKnown RBP18.88■□□□□ 0.61
CACNB3-207ENST00000547818 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
CACNB3-207ENST00000547818 KIF14Q15058 1648 aa18.86■□□□□ 0.61
CACNB3-207ENST00000547818 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
CACNB3-207ENST00000547818 KDM5BQ9UGL1 1544 aa18.84■□□□□ 0.61
CACNB3-207ENST00000547818 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.61
CACNB3-207ENST00000547818 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
CACNB3-207ENST00000547818 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
CACNB3-207ENST00000547818 GPATCH8Q9UKJ3 1502 aaKnown RBP18.75■□□□□ 0.59
CACNB3-207ENST00000547818 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms