RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NUP160Q12769 1436 aa25.5■■□□□ 1.67
TRAFD1-203ENST00000547063 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
TRAFD1-203ENST00000547063 CEP170Q5SW79 1584 aa25.45■■□□□ 1.66
TRAFD1-203ENST00000547063 IQGAP2Q13576 1575 aa25.42■■□□□ 1.66
TRAFD1-203ENST00000547063 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
TRAFD1-203ENST00000547063 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
TRAFD1-203ENST00000547063 CLIP1P30622 1438 aa25.33■■□□□ 1.65
TRAFD1-203ENST00000547063 CLASP1Q7Z460 1538 aa25.3■■□□□ 1.64
TRAFD1-203ENST00000547063 UGGT2Q9NYU1 1516 aa25.3■■□□□ 1.64
TRAFD1-203ENST00000547063 EFCAB5A4FU69 1503 aa25.29■■□□□ 1.64
TRAFD1-203ENST00000547063 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
TRAFD1-203ENST00000547063 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
TRAFD1-203ENST00000547063 JPH4Q96JJ6 628 aa25.26■■□□□ 1.63
TRAFD1-203ENST00000547063 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
TRAFD1-203ENST00000547063 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
TRAFD1-203ENST00000547063 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
TRAFD1-203ENST00000547063 CARMIL2Q6F5E8 1435 aa25.2■■□□□ 1.63
TRAFD1-203ENST00000547063 KIAA0556O60303 1618 aa25.15■■□□□ 1.62
TRAFD1-203ENST00000547063 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
TRAFD1-203ENST00000547063 DISP1Q96F81 1524 aa25.14■■□□□ 1.62
TRAFD1-203ENST00000547063 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
TRAFD1-203ENST00000547063 P3H3Q8IVL6 736 aa25.08■■□□□ 1.61
TRAFD1-203ENST00000547063 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
TRAFD1-203ENST00000547063 FMN1Q68DA7 1419 aa25.06■■□□□ 1.6
TRAFD1-203ENST00000547063 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
TRAFD1-203ENST00000547063 ERCC6L2Q5T890 1561 aa24.96■■□□□ 1.59
TRAFD1-203ENST00000547063 PTPRGP23470 1445 aa24.95■■□□□ 1.59
TRAFD1-203ENST00000547063 CASKIN1Q8WXD9 1431 aa24.91■■□□□ 1.58
TRAFD1-203ENST00000547063 FYCO1Q9BQS8 1478 aa24.89■■□□□ 1.58
TRAFD1-203ENST00000547063 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
TRAFD1-203ENST00000547063 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
TRAFD1-203ENST00000547063 PCF11O94913 1555 aaKnown RBP24.87■■□□□ 1.57
TRAFD1-203ENST00000547063 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
TRAFD1-203ENST00000547063 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
TRAFD1-203ENST00000547063 APLP2Q06481 763 aa24.84■■□□□ 1.57
TRAFD1-203ENST00000547063 ABCA8O94911 1581 aa24.82■■□□□ 1.56
TRAFD1-203ENST00000547063 UACAQ9BZF9 1416 aa24.81■■□□□ 1.56
TRAFD1-203ENST00000547063 RIMBP3CA6NJZ7 1639 aa24.8■■□□□ 1.56
TRAFD1-203ENST00000547063 RIMBP3BA6NNM3 1639 aa24.8■■□□□ 1.56
TRAFD1-203ENST00000547063 RIMBP3Q9UFD9 1639 aa24.8■■□□□ 1.56
TRAFD1-203ENST00000547063 ATP1B4Q9UN42 357 aaPredicted RBP24.8■■□□□ 1.56
TRAFD1-203ENST00000547063 PLB1Q6P1J6 1458 aa24.8■■□□□ 1.56
TRAFD1-203ENST00000547063 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
TRAFD1-203ENST00000547063 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
TRAFD1-203ENST00000547063 UHRF1BP1LA0JNW5 1464 aa24.76■■□□□ 1.55
TRAFD1-203ENST00000547063 ABCC2Q92887 1545 aa24.75■■□□□ 1.55
TRAFD1-203ENST00000547063 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
TRAFD1-203ENST00000547063 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
TRAFD1-203ENST00000547063 CFAP43Q8NDM7 1665 aa24.69■■□□□ 1.54
TRAFD1-203ENST00000547063 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
TRAFD1-203ENST00000547063 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
TRAFD1-203ENST00000547063 CDK11AQ9UQ88 783 aaPredicted RBP24.65■■□□□ 1.54
TRAFD1-203ENST00000547063 ADCY10Q96PN6 1610 aa24.64■■□□□ 1.53
TRAFD1-203ENST00000547063 KDM5BQ9UGL1 1544 aa24.62■■□□□ 1.53
TRAFD1-203ENST00000547063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
TRAFD1-203ENST00000547063 HNRNPUL2Q1KMD3 747 aaKnown RBP24.62■■□□□ 1.53
TRAFD1-203ENST00000547063 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
TRAFD1-203ENST00000547063 ATP10BO94823 1461 aa24.62■■□□□ 1.53
TRAFD1-203ENST00000547063 CDK13Q14004 1512 aaKnown RBP24.61■■□□□ 1.53
TRAFD1-203ENST00000547063 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
TRAFD1-203ENST00000547063 ARID3CA6NKF2 412 aa24.58■■□□□ 1.53
TRAFD1-203ENST00000547063 NPM1P06748 294 aaKnown RBP eCLIP24.58■■□□□ 1.53
TRAFD1-203ENST00000547063 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.52
TRAFD1-203ENST00000547063 MTUS2Q5JR59 1369 aa24.56■■□□□ 1.52
TRAFD1-203ENST00000547063 ZCCHC11Q5TAX3 1644 aaKnown RBP24.56■■□□□ 1.52
TRAFD1-203ENST00000547063 PLEKHD1A6NEE1 506 aa24.54■■□□□ 1.52
TRAFD1-203ENST00000547063 EHBP1L1Q8N3D4 1523 aa24.54■■□□□ 1.52
TRAFD1-203ENST00000547063 KANK4Q5T7N3 995 aaPredicted RBP24.52■■□□□ 1.52
TRAFD1-203ENST00000547063 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
TRAFD1-203ENST00000547063 MAGI3Q5TCQ9 1506 aa24.45■■□□□ 1.51
TRAFD1-203ENST00000547063 SUPT6HQ7KZ85 1726 aaKnown RBP24.45■■□□□ 1.5
TRAFD1-203ENST00000547063 PPARGC1BQ86YN6 1023 aaKnown RBP24.45■■□□□ 1.5
TRAFD1-203ENST00000547063 WDR7Q9Y4E6 1490 aa24.4■■□□□ 1.5
TRAFD1-203ENST00000547063 KIF14Q15058 1648 aa24.4■■□□□ 1.5
TRAFD1-203ENST00000547063 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
TRAFD1-203ENST00000547063 ASXL2Q76L83 1435 aa24.39■■□□□ 1.5
TRAFD1-203ENST00000547063 NCOA2Q15596 1464 aa24.37■■□□□ 1.49
TRAFD1-203ENST00000547063 KCNH8Q96L42 1107 aa24.3■■□□□ 1.48
TRAFD1-203ENST00000547063 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
TRAFD1-203ENST00000547063 MYOM3Q5VTT5 1437 aa24.27■■□□□ 1.48
TRAFD1-203ENST00000547063 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
TRAFD1-203ENST00000547063 ITSN2Q9NZM3 1697 aa24.26■■□□□ 1.47
TRAFD1-203ENST00000547063 PHLDB1Q86UU1 1377 aa24.26■■□□□ 1.47
TRAFD1-203ENST00000547063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRAFD1-203ENST00000547063 ABCA9Q8IUA7 1624 aa24.22■■□□□ 1.47
TRAFD1-203ENST00000547063 MIA2Q96PC5 1412 aa24.21■■□□□ 1.47
TRAFD1-203ENST00000547063 TTC37Q6PGP7 1564 aa24.2■■□□□ 1.47
TRAFD1-203ENST00000547063 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
TRAFD1-203ENST00000547063 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.46
TRAFD1-203ENST00000547063 FGD6Q6ZV73 1430 aa24.19■■□□□ 1.46
TRAFD1-203ENST00000547063 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
TRAFD1-203ENST00000547063 MYO5CQ9NQX4 1742 aa24.19■■□□□ 1.46
TRAFD1-203ENST00000547063 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
TRAFD1-203ENST00000547063 GLI2P10070 1586 aa24.18■■□□□ 1.46
TRAFD1-203ENST00000547063 PREX2Q70Z35 1606 aa24.17■■□□□ 1.46
TRAFD1-203ENST00000547063 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
TRAFD1-203ENST00000547063 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
TRAFD1-203ENST00000547063 PLCH2O75038 1416 aa24.14■■□□□ 1.45
TRAFD1-203ENST00000547063 DIP2BQ9P265 1576 aa24.14■■□□□ 1.45
TRAFD1-203ENST00000547063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms