RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
LETMD1-205ENST00000546992 KIAA0586Q9BVV6 1533 aa26.77■■□□□ 1.88
LETMD1-205ENST00000546992 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
LETMD1-205ENST00000546992 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
LETMD1-205ENST00000546992 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
LETMD1-205ENST00000546992 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
LETMD1-205ENST00000546992 TNIKQ9UKE5 1360 aa26.63■■□□□ 1.85
LETMD1-205ENST00000546992 UGGT2Q9NYU1 1516 aa26.63■■□□□ 1.85
LETMD1-205ENST00000546992 ERCC6L2Q5T890 1561 aa26.62■■□□□ 1.85
LETMD1-205ENST00000546992 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
LETMD1-205ENST00000546992 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
LETMD1-205ENST00000546992 DISP1Q96F81 1524 aa26.55■■□□□ 1.84
LETMD1-205ENST00000546992 KIAA0556O60303 1618 aa26.54■■□□□ 1.84
LETMD1-205ENST00000546992 PRG4Q92954 1404 aaPredicted RBP26.52■■□□□ 1.84
LETMD1-205ENST00000546992 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 RIMBP3CA6NJZ7 1639 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 RIMBP3BA6NNM3 1639 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 RIMBP3Q9UFD9 1639 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 EFCAB5A4FU69 1503 aa26.46■■□□□ 1.83
LETMD1-205ENST00000546992 RANGAP1P46060 587 aaPredicted RBP26.46■■□□□ 1.83
LETMD1-205ENST00000546992 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
LETMD1-205ENST00000546992 CEP162Q5TB80 1403 aa26.46■■□□□ 1.83
LETMD1-205ENST00000546992 CLIP1P30622 1438 aa26.41■■□□□ 1.82
LETMD1-205ENST00000546992 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.81
LETMD1-205ENST00000546992 FHOD3Q2V2M9 1422 aa26.38■■□□□ 1.81
LETMD1-205ENST00000546992 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
LETMD1-205ENST00000546992 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
LETMD1-205ENST00000546992 P3H3Q8IVL6 736 aa26.34■■□□□ 1.81
LETMD1-205ENST00000546992 PTPRGP23470 1445 aa26.23■■□□□ 1.79
LETMD1-205ENST00000546992 TTBK1Q5TCY1 1321 aaPredicted RBP26.21■■□□□ 1.79
LETMD1-205ENST00000546992 ABCA8O94911 1581 aa26.2■■□□□ 1.79
LETMD1-205ENST00000546992 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
LETMD1-205ENST00000546992 ADCY10Q96PN6 1610 aa26.17■■□□□ 1.78
LETMD1-205ENST00000546992 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
LETMD1-205ENST00000546992 RAPGEF6Q8TEU7 1601 aa26.17■■□□□ 1.78
LETMD1-205ENST00000546992 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.77
LETMD1-205ENST00000546992 FMN1Q68DA7 1419 aa26.14■■□□□ 1.77
LETMD1-205ENST00000546992 ABCC2Q92887 1545 aa26.11■■□□□ 1.77
LETMD1-205ENST00000546992 UACAQ9BZF9 1416 aa26.11■■□□□ 1.77
LETMD1-205ENST00000546992 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
LETMD1-205ENST00000546992 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
LETMD1-205ENST00000546992 UHRF1BP1LA0JNW5 1464 aa26.08■■□□□ 1.77
LETMD1-205ENST00000546992 NUP153P49790 1475 aaKnown RBP26.06■■□□□ 1.76
LETMD1-205ENST00000546992 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
LETMD1-205ENST00000546992 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
LETMD1-205ENST00000546992 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
LETMD1-205ENST00000546992 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
LETMD1-205ENST00000546992 CDK13Q14004 1512 aaKnown RBP25.98■■□□□ 1.75
LETMD1-205ENST00000546992 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
LETMD1-205ENST00000546992 EPRSP07814 1512 aaKnown RBP25.94■■□□□ 1.74
LETMD1-205ENST00000546992 ATP10BO94823 1461 aa25.94■■□□□ 1.74
LETMD1-205ENST00000546992 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
LETMD1-205ENST00000546992 ARID3CA6NKF2 412 aa25.92■■□□□ 1.74
LETMD1-205ENST00000546992 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
LETMD1-205ENST00000546992 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
LETMD1-205ENST00000546992 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
LETMD1-205ENST00000546992 MAGI3Q5TCQ9 1506 aa25.84■■□□□ 1.73
LETMD1-205ENST00000546992 MAPKBP1O60336 1514 aa25.83■■□□□ 1.72
LETMD1-205ENST00000546992 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
LETMD1-205ENST00000546992 ASXL2Q76L83 1435 aa25.77■■□□□ 1.72
LETMD1-205ENST00000546992 WDR7Q9Y4E6 1490 aa25.73■■□□□ 1.71
LETMD1-205ENST00000546992 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
LETMD1-205ENST00000546992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.71■■□□□ 1.71
LETMD1-205ENST00000546992 HNRNPUL2Q1KMD3 747 aaKnown RBP25.71■■□□□ 1.71
LETMD1-205ENST00000546992 KIF14Q15058 1648 aa25.7■■□□□ 1.71
LETMD1-205ENST00000546992 EHBP1L1Q8N3D4 1523 aa25.69■■□□□ 1.7
LETMD1-205ENST00000546992 KIF13AQ9H1H9 1805 aa25.68■■□□□ 1.7
LETMD1-205ENST00000546992 LRRC9Q6ZRR7 1453 aa25.68■■□□□ 1.7
LETMD1-205ENST00000546992 TROQ12816 1431 aaPredicted RBP25.68■■□□□ 1.7
LETMD1-205ENST00000546992 DIP2BQ9P265 1576 aa25.67■■□□□ 1.7
LETMD1-205ENST00000546992 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
LETMD1-205ENST00000546992 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
LETMD1-205ENST00000546992 TTC37Q6PGP7 1564 aa25.61■■□□□ 1.69
LETMD1-205ENST00000546992 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
LETMD1-205ENST00000546992 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
LETMD1-205ENST00000546992 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
LETMD1-205ENST00000546992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.59■■□□□ 1.69
LETMD1-205ENST00000546992 CDK11AQ9UQ88 783 aaPredicted RBP25.59■■□□□ 1.69
LETMD1-205ENST00000546992 ABCA9Q8IUA7 1624 aa25.59■■□□□ 1.69
LETMD1-205ENST00000546992 APLP2Q06481 763 aa25.58■■□□□ 1.69
LETMD1-205ENST00000546992 GLI2P10070 1586 aa25.57■■□□□ 1.68
LETMD1-205ENST00000546992 KCNH8Q96L42 1107 aa25.55■■□□□ 1.68
LETMD1-205ENST00000546992 MAP3K4Q9Y6R4 1608 aa25.55■■□□□ 1.68
LETMD1-205ENST00000546992 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
LETMD1-205ENST00000546992 CDC42BPAQ5VT25 1732 aa25.53■■□□□ 1.68
LETMD1-205ENST00000546992 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
LETMD1-205ENST00000546992 MYO5CQ9NQX4 1742 aa25.5■■□□□ 1.67
LETMD1-205ENST00000546992 PPRC1Q5VV67 1664 aaKnown RBP25.49■■□□□ 1.67
LETMD1-205ENST00000546992 CDC42BPBQ9Y5S2 1711 aa25.48■■□□□ 1.67
LETMD1-205ENST00000546992 TSPOAP1O95153 1857 aa25.47■■□□□ 1.67
LETMD1-205ENST00000546992 PREX2Q70Z35 1606 aa25.47■■□□□ 1.67
LETMD1-205ENST00000546992 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
LETMD1-205ENST00000546992 ITSN2Q9NZM3 1697 aa25.43■■□□□ 1.66
LETMD1-205ENST00000546992 PHLDB1Q86UU1 1377 aa25.42■■□□□ 1.66
LETMD1-205ENST00000546992 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
LETMD1-205ENST00000546992 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
LETMD1-205ENST00000546992 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
LETMD1-205ENST00000546992 PLCH2O75038 1416 aa25.36■■□□□ 1.65
LETMD1-205ENST00000546992 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
LETMD1-205ENST00000546992 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms