RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
DDX54-203ENST00000546869 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
DDX54-203ENST00000546869 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
DDX54-203ENST00000546869 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
DDX54-203ENST00000546869 FAM9AQ8IZU1 332 aaPredicted RBP24.01■■□□□ 1.43
DDX54-203ENST00000546869 PRG4Q92954 1404 aaPredicted RBP23.98■■□□□ 1.43
DDX54-203ENST00000546869 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
DDX54-203ENST00000546869 IQGAP2Q13576 1575 aa23.94■■□□□ 1.42
DDX54-203ENST00000546869 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
DDX54-203ENST00000546869 KIF21BO75037 1637 aa23.92■■□□□ 1.42
DDX54-203ENST00000546869 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
DDX54-203ENST00000546869 UGGT2Q9NYU1 1516 aa23.87■■□□□ 1.41
DDX54-203ENST00000546869 CARMIL2Q6F5E8 1435 aa23.85■■□□□ 1.41
DDX54-203ENST00000546869 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.41
DDX54-203ENST00000546869 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
DDX54-203ENST00000546869 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
DDX54-203ENST00000546869 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
DDX54-203ENST00000546869 PTPRGP23470 1445 aa23.74■■□□□ 1.39
DDX54-203ENST00000546869 UBTFP17480 764 aaKnown RBP23.72■■□□□ 1.39
DDX54-203ENST00000546869 KIAA0556O60303 1618 aa23.7■■□□□ 1.39
DDX54-203ENST00000546869 SAMD9Q5K651 1589 aa23.62■■□□□ 1.37
DDX54-203ENST00000546869 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
DDX54-203ENST00000546869 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
DDX54-203ENST00000546869 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.37
DDX54-203ENST00000546869 EFCAB5A4FU69 1503 aa23.57■■□□□ 1.36
DDX54-203ENST00000546869 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
DDX54-203ENST00000546869 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
DDX54-203ENST00000546869 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
DDX54-203ENST00000546869 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
DDX54-203ENST00000546869 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
DDX54-203ENST00000546869 ABCC2Q92887 1545 aa23.5■■□□□ 1.35
DDX54-203ENST00000546869 PLB1Q6P1J6 1458 aa23.47■■□□□ 1.35
DDX54-203ENST00000546869 ABCA8O94911 1581 aa23.47■■□□□ 1.35
DDX54-203ENST00000546869 FHOD3Q2V2M9 1422 aa23.46■■□□□ 1.35
DDX54-203ENST00000546869 ARHGAP35Q9NRY4 1499 aa23.46■■□□□ 1.35
DDX54-203ENST00000546869 KDM5BQ9UGL1 1544 aa23.45■■□□□ 1.34
DDX54-203ENST00000546869 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
DDX54-203ENST00000546869 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
DDX54-203ENST00000546869 FMN1Q68DA7 1419 aa23.38■■□□□ 1.33
DDX54-203ENST00000546869 CLIP1P30622 1438 aa23.37■■□□□ 1.33
DDX54-203ENST00000546869 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
DDX54-203ENST00000546869 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.33
DDX54-203ENST00000546869 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
DDX54-203ENST00000546869 ASXL2Q76L83 1435 aa23.31■■□□□ 1.32
DDX54-203ENST00000546869 ATP10BO94823 1461 aa23.3■■□□□ 1.32
DDX54-203ENST00000546869 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
DDX54-203ENST00000546869 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
DDX54-203ENST00000546869 CEP162Q5TB80 1403 aa23.28■■□□□ 1.32
DDX54-203ENST00000546869 FAM69CQ0P6D2 419 aa23.24■■□□□ 1.31
DDX54-203ENST00000546869 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
DDX54-203ENST00000546869 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
DDX54-203ENST00000546869 DIP2BQ9P265 1576 aa23.21■■□□□ 1.31
DDX54-203ENST00000546869 GLI2P10070 1586 aa23.19■■□□□ 1.3
DDX54-203ENST00000546869 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
DDX54-203ENST00000546869 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
DDX54-203ENST00000546869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
DDX54-203ENST00000546869 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
DDX54-203ENST00000546869 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
DDX54-203ENST00000546869 KIF13AQ9H1H9 1805 aa23.17■■□□□ 1.3
DDX54-203ENST00000546869 PLEKHD1A6NEE1 506 aa23.15■■□□□ 1.3
DDX54-203ENST00000546869 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
DDX54-203ENST00000546869 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
DDX54-203ENST00000546869 CDK11AQ9UQ88 783 aaPredicted RBP23.11■■□□□ 1.29
DDX54-203ENST00000546869 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
DDX54-203ENST00000546869 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
DDX54-203ENST00000546869 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
DDX54-203ENST00000546869 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.28
DDX54-203ENST00000546869 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
DDX54-203ENST00000546869 MAP3K4Q9Y6R4 1608 aa23.03■■□□□ 1.28
DDX54-203ENST00000546869 CD109Q6YHK3 1445 aa23■■□□□ 1.27
DDX54-203ENST00000546869 CFAP43Q8NDM7 1665 aa22.99■■□□□ 1.27
DDX54-203ENST00000546869 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
DDX54-203ENST00000546869 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
DDX54-203ENST00000546869 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
DDX54-203ENST00000546869 ABCA9Q8IUA7 1624 aa22.98■■□□□ 1.27
DDX54-203ENST00000546869 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
DDX54-203ENST00000546869 PPRC1Q5VV67 1664 aaKnown RBP22.93■■□□□ 1.26
DDX54-203ENST00000546869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
DDX54-203ENST00000546869 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.26
DDX54-203ENST00000546869 TSPOAP1O95153 1857 aa22.89■■□□□ 1.25
DDX54-203ENST00000546869 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
DDX54-203ENST00000546869 PLCH2O75038 1416 aa22.85■■□□□ 1.25
DDX54-203ENST00000546869 KIF14Q15058 1648 aa22.85■■□□□ 1.25
DDX54-203ENST00000546869 MTUS2Q5JR59 1369 aa22.84■■□□□ 1.25
DDX54-203ENST00000546869 NEO1Q92859 1461 aa22.84■■□□□ 1.25
DDX54-203ENST00000546869 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.25
DDX54-203ENST00000546869 ARAP3Q8WWN8 1544 aa22.82■■□□□ 1.24
DDX54-203ENST00000546869 TIAM1Q13009 1591 aa22.81■■□□□ 1.24
DDX54-203ENST00000546869 EHBP1L1Q8N3D4 1523 aa22.78■■□□□ 1.24
DDX54-203ENST00000546869 KDM6BO15054 1643 aa22.78■■□□□ 1.24
DDX54-203ENST00000546869 COL17A1Q9UMD9 1497 aaPredicted RBP22.78■■□□□ 1.24
DDX54-203ENST00000546869 APLP2Q06481 763 aa22.77■■□□□ 1.24
DDX54-203ENST00000546869 EFCAB2Q5VUJ9 269 aa22.77■■□□□ 1.24
DDX54-203ENST00000546869 FANCAO15360 1455 aa22.76■■□□□ 1.23
DDX54-203ENST00000546869 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
DDX54-203ENST00000546869 AKNAQ7Z591 1439 aa22.74■■□□□ 1.23
DDX54-203ENST00000546869 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
DDX54-203ENST00000546869 MYO5CQ9NQX4 1742 aa22.71■■□□□ 1.23
DDX54-203ENST00000546869 KANK4Q5T7N3 995 aaPredicted RBP22.71■■□□□ 1.23
DDX54-203ENST00000546869 GPATCH8Q9UKJ3 1502 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms