RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 JPH4Q96JJ6 628 aa27.92■■■□□ 2.06
CCDC38-203ENST00000546803 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.06
CCDC38-203ENST00000546803 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.06
CCDC38-203ENST00000546803 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.06
CCDC38-203ENST00000546803 SHROOM2Q13796 1616 aa27.82■■■□□ 2.04
CCDC38-203ENST00000546803 PRG4Q92954 1404 aaPredicted RBP27.8■■■□□ 2.04
CCDC38-203ENST00000546803 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
CCDC38-203ENST00000546803 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
CCDC38-203ENST00000546803 IQGAP2Q13576 1575 aa27.73■■■□□ 2.03
CCDC38-203ENST00000546803 ERCC6L2Q5T890 1561 aa27.7■■■□□ 2.03
CCDC38-203ENST00000546803 KIF21BO75037 1637 aa27.68■■■□□ 2.02
CCDC38-203ENST00000546803 CARMIL2Q6F5E8 1435 aa27.66■■■□□ 2.02
CCDC38-203ENST00000546803 UGGT2Q9NYU1 1516 aa27.64■■■□□ 2.02
CCDC38-203ENST00000546803 GOLGA3Q08378 1498 aa27.59■■■□□ 2.01
CCDC38-203ENST00000546803 CTTNBP2Q8WZ74 1663 aa27.57■■■□□ 2
CCDC38-203ENST00000546803 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
CCDC38-203ENST00000546803 DISP1Q96F81 1524 aa27.56■■■□□ 2
CCDC38-203ENST00000546803 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
CCDC38-203ENST00000546803 PTPRGP23470 1445 aa27.52■■■□□ 2
CCDC38-203ENST00000546803 EHMT2Q96KQ7 1210 aa27.51■■□□□ 1.99
CCDC38-203ENST00000546803 KIAA0556O60303 1618 aa27.45■■□□□ 1.99
CCDC38-203ENST00000546803 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
CCDC38-203ENST00000546803 RANGAP1P46060 587 aaPredicted RBP27.38■■□□□ 1.97
CCDC38-203ENST00000546803 P3H3Q8IVL6 736 aa27.35■■□□□ 1.97
CCDC38-203ENST00000546803 NPM1P06748 294 aaKnown RBP eCLIP27.33■■□□□ 1.97
CCDC38-203ENST00000546803 UACAQ9BZF9 1416 aa27.33■■□□□ 1.96
CCDC38-203ENST00000546803 SAMD9Q5K651 1589 aa27.32■■□□□ 1.96
CCDC38-203ENST00000546803 EFCAB5A4FU69 1503 aa27.3■■□□□ 1.96
CCDC38-203ENST00000546803 UHRF1BP1LA0JNW5 1464 aa27.29■■□□□ 1.96
CCDC38-203ENST00000546803 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
CCDC38-203ENST00000546803 ABCC2Q92887 1545 aa27.23■■□□□ 1.95
CCDC38-203ENST00000546803 FHOD3Q2V2M9 1422 aa27.23■■□□□ 1.95
CCDC38-203ENST00000546803 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
CCDC38-203ENST00000546803 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
CCDC38-203ENST00000546803 ABCA8O94911 1581 aa27.18■■□□□ 1.94
CCDC38-203ENST00000546803 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
CCDC38-203ENST00000546803 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
CCDC38-203ENST00000546803 KDM5BQ9UGL1 1544 aa27.15■■□□□ 1.94
CCDC38-203ENST00000546803 MAPKBP1O60336 1514 aa27.11■■□□□ 1.93
CCDC38-203ENST00000546803 CLIP1P30622 1438 aa27.11■■□□□ 1.93
CCDC38-203ENST00000546803 FMN1Q68DA7 1419 aa27.1■■□□□ 1.93
CCDC38-203ENST00000546803 ASXL2Q76L83 1435 aa27.03■■□□□ 1.92
CCDC38-203ENST00000546803 RAPGEF6Q8TEU7 1601 aa27.02■■□□□ 1.92
CCDC38-203ENST00000546803 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
CCDC38-203ENST00000546803 ATP10BO94823 1461 aa27■■□□□ 1.91
CCDC38-203ENST00000546803 ABCC10Q5T3U5 1492 aa27■■□□□ 1.91
CCDC38-203ENST00000546803 NUP153P49790 1475 aaKnown RBP26.99■■□□□ 1.91
CCDC38-203ENST00000546803 ZCCHC11Q5TAX3 1644 aaKnown RBP26.98■■□□□ 1.91
CCDC38-203ENST00000546803 ARID3CA6NKF2 412 aa26.97■■□□□ 1.91
CCDC38-203ENST00000546803 FAM69CQ0P6D2 419 aa26.97■■□□□ 1.91
CCDC38-203ENST00000546803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.93■■□□□ 1.9
CCDC38-203ENST00000546803 HNRNPUL2Q1KMD3 747 aaKnown RBP26.93■■□□□ 1.9
CCDC38-203ENST00000546803 WDR7Q9Y4E6 1490 aa26.92■■□□□ 1.9
CCDC38-203ENST00000546803 ATP1B4Q9UN42 357 aaPredicted RBP26.91■■□□□ 1.9
CCDC38-203ENST00000546803 CASKIN1Q8WXD9 1431 aa26.89■■□□□ 1.89
CCDC38-203ENST00000546803 DIP2BQ9P265 1576 aa26.88■■□□□ 1.89
CCDC38-203ENST00000546803 EPRSP07814 1512 aaKnown RBP26.85■■□□□ 1.89
CCDC38-203ENST00000546803 PLEKHD1A6NEE1 506 aa26.85■■□□□ 1.89
CCDC38-203ENST00000546803 HECW1Q76N89 1606 aa26.85■■□□□ 1.89
CCDC38-203ENST00000546803 KCNH8Q96L42 1107 aa26.82■■□□□ 1.88
CCDC38-203ENST00000546803 GLI2P10070 1586 aa26.82■■□□□ 1.88
CCDC38-203ENST00000546803 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
CCDC38-203ENST00000546803 CDK11AQ9UQ88 783 aaPredicted RBP26.8■■□□□ 1.88
CCDC38-203ENST00000546803 CDK13Q14004 1512 aaKnown RBP26.78■■□□□ 1.88
CCDC38-203ENST00000546803 PCF11O94913 1555 aaKnown RBP26.77■■□□□ 1.88
CCDC38-203ENST00000546803 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.88
CCDC38-203ENST00000546803 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
CCDC38-203ENST00000546803 VPS8Q8N3P4 1428 aa26.7■■□□□ 1.86
CCDC38-203ENST00000546803 CD109Q6YHK3 1445 aa26.67■■□□□ 1.86
CCDC38-203ENST00000546803 TROQ12816 1431 aaPredicted RBP26.65■■□□□ 1.86
CCDC38-203ENST00000546803 MAP3K4Q9Y6R4 1608 aa26.64■■□□□ 1.85
CCDC38-203ENST00000546803 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
CCDC38-203ENST00000546803 MAGI3Q5TCQ9 1506 aa26.6■■□□□ 1.85
CCDC38-203ENST00000546803 ABCA9Q8IUA7 1624 aa26.59■■□□□ 1.85
CCDC38-203ENST00000546803 CFAP43Q8NDM7 1665 aa26.59■■□□□ 1.85
CCDC38-203ENST00000546803 LRRIQ1Q96JM4 1722 aa26.56■■□□□ 1.84
CCDC38-203ENST00000546803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.54■■□□□ 1.84
CCDC38-203ENST00000546803 MTUS2Q5JR59 1369 aa26.52■■□□□ 1.84
CCDC38-203ENST00000546803 TSPOAP1O95153 1857 aa26.51■■□□□ 1.83
CCDC38-203ENST00000546803 PPRC1Q5VV67 1664 aaKnown RBP26.5■■□□□ 1.83
CCDC38-203ENST00000546803 KIF14Q15058 1648 aa26.5■■□□□ 1.83
CCDC38-203ENST00000546803 PHLDB1Q86UU1 1377 aa26.49■■□□□ 1.83
CCDC38-203ENST00000546803 APLP2Q06481 763 aa26.46■■□□□ 1.83
CCDC38-203ENST00000546803 PLCH2O75038 1416 aa26.46■■□□□ 1.83
CCDC38-203ENST00000546803 MAP3K1Q13233 1512 aa26.45■■□□□ 1.83
CCDC38-203ENST00000546803 TTC37Q6PGP7 1564 aa26.45■■□□□ 1.82
CCDC38-203ENST00000546803 NEO1Q92859 1461 aa26.44■■□□□ 1.82
CCDC38-203ENST00000546803 TIAM1Q13009 1591 aa26.42■■□□□ 1.82
CCDC38-203ENST00000546803 EHBP1L1Q8N3D4 1523 aa26.41■■□□□ 1.82
CCDC38-203ENST00000546803 KDM6BO15054 1643 aa26.4■■□□□ 1.82
CCDC38-203ENST00000546803 EFCAB2Q5VUJ9 269 aa26.4■■□□□ 1.82
CCDC38-203ENST00000546803 ARAP3Q8WWN8 1544 aa26.39■■□□□ 1.82
CCDC38-203ENST00000546803 FANCAO15360 1455 aa26.39■■□□□ 1.82
CCDC38-203ENST00000546803 COL17A1Q9UMD9 1497 aaPredicted RBP26.38■■□□□ 1.81
CCDC38-203ENST00000546803 LRRC9Q6ZRR7 1453 aa26.36■■□□□ 1.81
CCDC38-203ENST00000546803 AKNAQ7Z591 1439 aa26.35■■□□□ 1.81
CCDC38-203ENST00000546803 KANK4Q5T7N3 995 aaPredicted RBP26.34■■□□□ 1.81
CCDC38-203ENST00000546803 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.8
CCDC38-203ENST00000546803 CFAP74Q9C0B2 1584 aa26.31■■□□□ 1.8
CCDC38-203ENST00000546803 ARHGAP5Q13017 1502 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms