RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 JPH4Q96JJ6 628 aa31.76■■■□□ 2.67
GPN3-204ENST00000546592 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
GPN3-204ENST00000546592 SHROOM2Q13796 1616 aa31.72■■■□□ 2.67
GPN3-204ENST00000546592 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
GPN3-204ENST00000546592 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
GPN3-204ENST00000546592 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
GPN3-204ENST00000546592 IQGAP2Q13576 1575 aa31.7■■■□□ 2.67
GPN3-204ENST00000546592 CTTNBP2Q8WZ74 1663 aa31.67■■■□□ 2.66
GPN3-204ENST00000546592 PRG4Q92954 1404 aaPredicted RBP31.65■■■□□ 2.66
GPN3-204ENST00000546592 GOLGA3Q08378 1498 aa31.65■■■□□ 2.66
GPN3-204ENST00000546592 EHMT2Q96KQ7 1210 aa31.59■■■□□ 2.65
GPN3-204ENST00000546592 UBTFP17480 764 aaKnown RBP31.58■■■□□ 2.65
GPN3-204ENST00000546592 ERCC6L2Q5T890 1561 aa31.55■■■□□ 2.64
GPN3-204ENST00000546592 CARMIL2Q6F5E8 1435 aa31.54■■■□□ 2.64
GPN3-204ENST00000546592 UGGT2Q9NYU1 1516 aa31.54■■■□□ 2.64
GPN3-204ENST00000546592 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
GPN3-204ENST00000546592 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
GPN3-204ENST00000546592 DISP1Q96F81 1524 aa31.43■■■□□ 2.62
GPN3-204ENST00000546592 TNIKQ9UKE5 1360 aa31.39■■■□□ 2.62
GPN3-204ENST00000546592 KIAA0556O60303 1618 aa31.38■■■□□ 2.61
GPN3-204ENST00000546592 RANGAP1P46060 587 aaPredicted RBP31.35■■■□□ 2.61
GPN3-204ENST00000546592 PTPRGP23470 1445 aa31.34■■■□□ 2.61
GPN3-204ENST00000546592 TTBK1Q5TCY1 1321 aaPredicted RBP31.3■■■□□ 2.6
GPN3-204ENST00000546592 SAMD9Q5K651 1589 aa31.27■■■□□ 2.6
GPN3-204ENST00000546592 EFCAB5A4FU69 1503 aa31.26■■■□□ 2.59
GPN3-204ENST00000546592 P3H3Q8IVL6 736 aa31.26■■■□□ 2.59
GPN3-204ENST00000546592 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
GPN3-204ENST00000546592 FHOD3Q2V2M9 1422 aa31.13■■■□□ 2.57
GPN3-204ENST00000546592 UACAQ9BZF9 1416 aa31.13■■■□□ 2.57
GPN3-204ENST00000546592 ARHGAP35Q9NRY4 1499 aa31.12■■■□□ 2.57
GPN3-204ENST00000546592 CLIP1P30622 1438 aa31.08■■■□□ 2.57
GPN3-204ENST00000546592 NPM1P06748 294 aaKnown RBP eCLIP31.08■■■□□ 2.57
GPN3-204ENST00000546592 ADCY10Q96PN6 1610 aa31.07■■■□□ 2.56
GPN3-204ENST00000546592 UHRF1BP1LA0JNW5 1464 aa31.07■■■□□ 2.56
GPN3-204ENST00000546592 ABCC2Q92887 1545 aa31.04■■■□□ 2.56
GPN3-204ENST00000546592 PLB1Q6P1J6 1458 aa31.04■■■□□ 2.56
GPN3-204ENST00000546592 ABCA8O94911 1581 aa31.02■■■□□ 2.56
GPN3-204ENST00000546592 CEP162Q5TB80 1403 aa31.01■■■□□ 2.55
GPN3-204ENST00000546592 FMN1Q68DA7 1419 aa30.98■■■□□ 2.55
GPN3-204ENST00000546592 RAPGEF6Q8TEU7 1601 aa30.93■■■□□ 2.54
GPN3-204ENST00000546592 KDM5BQ9UGL1 1544 aa30.9■■■□□ 2.54
GPN3-204ENST00000546592 MAPKBP1O60336 1514 aa30.83■■■□□ 2.53
GPN3-204ENST00000546592 ZCCHC11Q5TAX3 1644 aaKnown RBP30.83■■■□□ 2.53
GPN3-204ENST00000546592 ATP1B4Q9UN42 357 aaPredicted RBP30.81■■■□□ 2.52
GPN3-204ENST00000546592 NUP153P49790 1475 aaKnown RBP30.81■■■□□ 2.52
GPN3-204ENST00000546592 ARID3CA6NKF2 412 aa30.79■■■□□ 2.52
GPN3-204ENST00000546592 ATP10BO94823 1461 aa30.78■■■□□ 2.52
GPN3-204ENST00000546592 HECW1Q76N89 1606 aa30.76■■■□□ 2.52
GPN3-204ENST00000546592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.76■■■□□ 2.51
GPN3-204ENST00000546592 TRHP20396 242 aaPredicted RBP30.76■■■□□ 2.51
GPN3-204ENST00000546592 HNRNPUL2Q1KMD3 747 aaKnown RBP30.76■■■□□ 2.51
GPN3-204ENST00000546592 ASXL2Q76L83 1435 aa30.75■■■□□ 2.51
GPN3-204ENST00000546592 CASKIN1Q8WXD9 1431 aa30.75■■■□□ 2.51
GPN3-204ENST00000546592 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
GPN3-204ENST00000546592 FYCO1Q9BQS8 1478 aa30.7■■■□□ 2.51
GPN3-204ENST00000546592 EPRSP07814 1512 aaKnown RBP30.67■■■□□ 2.5
GPN3-204ENST00000546592 ABCC10Q5T3U5 1492 aa30.66■■■□□ 2.5
GPN3-204ENST00000546592 WDR7Q9Y4E6 1490 aa30.66■■■□□ 2.5
GPN3-204ENST00000546592 VPS8Q8N3P4 1428 aa30.63■■■□□ 2.49
GPN3-204ENST00000546592 CDK13Q14004 1512 aaKnown RBP30.63■■■□□ 2.49
GPN3-204ENST00000546592 PLEKHD1A6NEE1 506 aa30.62■■■□□ 2.49
GPN3-204ENST00000546592 FAM69CQ0P6D2 419 aa30.62■■■□□ 2.49
GPN3-204ENST00000546592 CCDC18Q5T9S5 1454 aa30.62■■■□□ 2.49
GPN3-204ENST00000546592 CDK11AQ9UQ88 783 aaPredicted RBP30.61■■■□□ 2.49
GPN3-204ENST00000546592 DIP2BQ9P265 1576 aa30.59■■■□□ 2.49
GPN3-204ENST00000546592 KCNH8Q96L42 1107 aa30.56■■■□□ 2.48
GPN3-204ENST00000546592 KIF13AQ9H1H9 1805 aa30.53■■■□□ 2.48
GPN3-204ENST00000546592 LRRIQ1Q96JM4 1722 aa30.53■■■□□ 2.48
GPN3-204ENST00000546592 GLI2P10070 1586 aa30.52■■■□□ 2.48
GPN3-204ENST00000546592 TROQ12816 1431 aaPredicted RBP30.44■■■□□ 2.46
GPN3-204ENST00000546592 APLP2Q06481 763 aa30.38■■■□□ 2.45
GPN3-204ENST00000546592 MAP3K4Q9Y6R4 1608 aa30.36■■■□□ 2.45
GPN3-204ENST00000546592 MTUS2Q5JR59 1369 aa30.36■■■□□ 2.45
GPN3-204ENST00000546592 CD109Q6YHK3 1445 aa30.36■■■□□ 2.45
GPN3-204ENST00000546592 CFAP43Q8NDM7 1665 aa30.36■■■□□ 2.45
GPN3-204ENST00000546592 ABCA9Q8IUA7 1624 aa30.35■■■□□ 2.45
GPN3-204ENST00000546592 KIF14Q15058 1648 aa30.33■■■□□ 2.45
GPN3-204ENST00000546592 TIAM1Q13009 1591 aa30.33■■■□□ 2.45
GPN3-204ENST00000546592 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
GPN3-204ENST00000546592 MAGI3Q5TCQ9 1506 aa30.32■■■□□ 2.44
GPN3-204ENST00000546592 TSPOAP1O95153 1857 aa30.31■■■□□ 2.44
GPN3-204ENST00000546592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.3■■■□□ 2.44
GPN3-204ENST00000546592 TEX14Q8IWB6 1497 aa30.28■■■□□ 2.44
GPN3-204ENST00000546592 EHBP1L1Q8N3D4 1523 aa30.27■■■□□ 2.44
GPN3-204ENST00000546592 TTC37Q6PGP7 1564 aa30.24■■■□□ 2.43
GPN3-204ENST00000546592 PPRC1Q5VV67 1664 aaKnown RBP30.22■■■□□ 2.43
GPN3-204ENST00000546592 LRRC9Q6ZRR7 1453 aa30.21■■■□□ 2.43
GPN3-204ENST00000546592 PLCH2O75038 1416 aa30.16■■■□□ 2.42
GPN3-204ENST00000546592 KANK4Q5T7N3 995 aaPredicted RBP30.15■■■□□ 2.42
GPN3-204ENST00000546592 MYO5CQ9NQX4 1742 aa30.13■■■□□ 2.41
GPN3-204ENST00000546592 SUPT6HQ7KZ85 1726 aaKnown RBP30.13■■■□□ 2.41
GPN3-204ENST00000546592 PHLDB1Q86UU1 1377 aa30.12■■■□□ 2.41
GPN3-204ENST00000546592 ARAP3Q8WWN8 1544 aa30.12■■■□□ 2.41
GPN3-204ENST00000546592 CCNB3Q8WWL7 1395 aa30.11■■■□□ 2.41
GPN3-204ENST00000546592 NEO1Q92859 1461 aa30.11■■■□□ 2.41
GPN3-204ENST00000546592 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
GPN3-204ENST00000546592 FANCAO15360 1455 aa30.1■■■□□ 2.41
GPN3-204ENST00000546592 CFAP74Q9C0B2 1584 aa30.08■■■□□ 2.41
GPN3-204ENST00000546592 NCOA2Q15596 1464 aa30.07■■■□□ 2.4
GPN3-204ENST00000546592 ARHGAP5Q13017 1502 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms