RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SHROOM2Q13796 1616 aa34.34■■■■□ 3.09
SCARB1-211ENST00000546215 JPH4Q96JJ6 628 aa34.33■■■■□ 3.09
SCARB1-211ENST00000546215 KIF21BO75037 1637 aa34.33■■■■□ 3.09
SCARB1-211ENST00000546215 RIMBP3CA6NJZ7 1639 aa34.32■■■■□ 3.08
SCARB1-211ENST00000546215 RIMBP3BA6NNM3 1639 aa34.32■■■■□ 3.08
SCARB1-211ENST00000546215 RIMBP3Q9UFD9 1639 aa34.32■■■■□ 3.08
SCARB1-211ENST00000546215 IQGAP2Q13576 1575 aa34.26■■■■□ 3.08
SCARB1-211ENST00000546215 CTTNBP2Q8WZ74 1663 aa34.22■■■■□ 3.07
SCARB1-211ENST00000546215 PRG4Q92954 1404 aaPredicted RBP34.21■■■■□ 3.07
SCARB1-211ENST00000546215 ERCC6L2Q5T890 1561 aa34.21■■■■□ 3.07
SCARB1-211ENST00000546215 GOLGA3Q08378 1498 aa34.16■■■■□ 3.06
SCARB1-211ENST00000546215 EHMT2Q96KQ7 1210 aa34.14■■■■□ 3.06
SCARB1-211ENST00000546215 ARAP1Q96P48 1450 aa34.13■■■■□ 3.05
SCARB1-211ENST00000546215 UGGT2Q9NYU1 1516 aa34.1■■■■□ 3.05
SCARB1-211ENST00000546215 UBTFP17480 764 aaKnown RBP34.06■■■■□ 3.04
SCARB1-211ENST00000546215 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
SCARB1-211ENST00000546215 DISP1Q96F81 1524 aa34.02■■■■□ 3.04
SCARB1-211ENST00000546215 CARMIL2Q6F5E8 1435 aa34.01■■■■□ 3.04
SCARB1-211ENST00000546215 KIAA0556O60303 1618 aa33.93■■■■□ 3.02
SCARB1-211ENST00000546215 TNIKQ9UKE5 1360 aa33.9■■■■□ 3.02
SCARB1-211ENST00000546215 RANGAP1P46060 587 aaPredicted RBP33.86■■■■□ 3.01
SCARB1-211ENST00000546215 PTPRGP23470 1445 aa33.85■■■■□ 3.01
SCARB1-211ENST00000546215 SAMD9Q5K651 1589 aa33.83■■■■□ 3.01
SCARB1-211ENST00000546215 TTBK1Q5TCY1 1321 aaPredicted RBP33.79■■■■□ 3
SCARB1-211ENST00000546215 LOC105371045A0A1W2PR82 267 aa33.79■■■■□ 3
SCARB1-211ENST00000546215 P3H3Q8IVL6 736 aa33.79■■■■□ 3
SCARB1-211ENST00000546215 EFCAB5A4FU69 1503 aa33.73■■■□□ 2.99
SCARB1-211ENST00000546215 FHOD3Q2V2M9 1422 aa33.67■■■□□ 2.98
SCARB1-211ENST00000546215 ARHGAP35Q9NRY4 1499 aa33.67■■■□□ 2.98
SCARB1-211ENST00000546215 ADCY10Q96PN6 1610 aa33.64■■■□□ 2.98
SCARB1-211ENST00000546215 UACAQ9BZF9 1416 aa33.63■■■□□ 2.97
SCARB1-211ENST00000546215 UHRF1BP1LA0JNW5 1464 aa33.59■■■□□ 2.97
SCARB1-211ENST00000546215 PLB1Q6P1J6 1458 aa33.59■■■□□ 2.97
SCARB1-211ENST00000546215 CLIP1P30622 1438 aa33.56■■■□□ 2.96
SCARB1-211ENST00000546215 ABCC2Q92887 1545 aa33.56■■■□□ 2.96
SCARB1-211ENST00000546215 ABCA8O94911 1581 aa33.55■■■□□ 2.96
SCARB1-211ENST00000546215 CEP162Q5TB80 1403 aa33.51■■■□□ 2.95
SCARB1-211ENST00000546215 NPM1P06748 294 aaKnown RBP eCLIP33.48■■■□□ 2.95
SCARB1-211ENST00000546215 FMN1Q68DA7 1419 aa33.43■■■□□ 2.94
SCARB1-211ENST00000546215 KDM5BQ9UGL1 1544 aa33.43■■■□□ 2.94
SCARB1-211ENST00000546215 RAPGEF6Q8TEU7 1601 aa33.42■■■□□ 2.94
SCARB1-211ENST00000546215 MAPKBP1O60336 1514 aa33.35■■■□□ 2.93
SCARB1-211ENST00000546215 ZCCHC11Q5TAX3 1644 aaKnown RBP33.34■■■□□ 2.93
SCARB1-211ENST00000546215 NUP153P49790 1475 aaKnown RBP33.34■■■□□ 2.93
SCARB1-211ENST00000546215 ATP10BO94823 1461 aa33.3■■■□□ 2.92
SCARB1-211ENST00000546215 ARID3CA6NKF2 412 aa33.29■■■□□ 2.92
SCARB1-211ENST00000546215 ASXL2Q76L83 1435 aa33.25■■■□□ 2.91
SCARB1-211ENST00000546215 CASKIN1Q8WXD9 1431 aa33.22■■■□□ 2.91
SCARB1-211ENST00000546215 HECW1Q76N89 1606 aa33.21■■■□□ 2.91
SCARB1-211ENST00000546215 TRHP20396 242 aaPredicted RBP33.21■■■□□ 2.91
SCARB1-211ENST00000546215 ATP1B4Q9UN42 357 aaPredicted RBP33.21■■■□□ 2.91
SCARB1-211ENST00000546215 PCF11O94913 1555 aaKnown RBP33.2■■■□□ 2.91
SCARB1-211ENST00000546215 ABCC10Q5T3U5 1492 aa33.15■■■□□ 2.9
SCARB1-211ENST00000546215 EPRSP07814 1512 aaKnown RBP33.15■■■□□ 2.9
SCARB1-211ENST00000546215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.15■■■□□ 2.9
SCARB1-211ENST00000546215 HNRNPUL2Q1KMD3 747 aaKnown RBP33.15■■■□□ 2.9
SCARB1-211ENST00000546215 FYCO1Q9BQS8 1478 aa33.15■■■□□ 2.9
SCARB1-211ENST00000546215 WDR7Q9Y4E6 1490 aa33.13■■■□□ 2.89
SCARB1-211ENST00000546215 CDK13Q14004 1512 aaKnown RBP33.13■■■□□ 2.89
SCARB1-211ENST00000546215 DIP2BQ9P265 1576 aa33.1■■■□□ 2.89
SCARB1-211ENST00000546215 LRRIQ1Q96JM4 1722 aa33.1■■■□□ 2.89
SCARB1-211ENST00000546215 KIF13AQ9H1H9 1805 aa33.09■■■□□ 2.89
SCARB1-211ENST00000546215 FAM69CQ0P6D2 419 aa33.09■■■□□ 2.89
SCARB1-211ENST00000546215 VPS8Q8N3P4 1428 aa33.08■■■□□ 2.89
SCARB1-211ENST00000546215 PLEKHD1A6NEE1 506 aa33.04■■■□□ 2.88
SCARB1-211ENST00000546215 CCDC18Q5T9S5 1454 aa33.03■■■□□ 2.88
SCARB1-211ENST00000546215 KCNH8Q96L42 1107 aa33.01■■■□□ 2.88
SCARB1-211ENST00000546215 GLI2P10070 1586 aa33■■■□□ 2.87
SCARB1-211ENST00000546215 CDK11AQ9UQ88 783 aaPredicted RBP32.97■■■□□ 2.87
SCARB1-211ENST00000546215 TROQ12816 1431 aaPredicted RBP32.88■■■□□ 2.85
SCARB1-211ENST00000546215 MAGI3Q5TCQ9 1506 aa32.86■■■□□ 2.85
SCARB1-211ENST00000546215 MAP3K4Q9Y6R4 1608 aa32.86■■■□□ 2.85
SCARB1-211ENST00000546215 ABCA9Q8IUA7 1624 aa32.83■■■□□ 2.85
SCARB1-211ENST00000546215 CFAP43Q8NDM7 1665 aa32.81■■■□□ 2.84
SCARB1-211ENST00000546215 TSPOAP1O95153 1857 aa32.81■■■□□ 2.84
SCARB1-211ENST00000546215 CD109Q6YHK3 1445 aa32.8■■■□□ 2.84
SCARB1-211ENST00000546215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.78■■■□□ 2.842e-7■■■■□ 22.7
SCARB1-211ENST00000546215 TIAM1Q13009 1591 aa32.77■■■□□ 2.84
SCARB1-211ENST00000546215 PPRC1Q5VV67 1664 aaKnown RBP32.76■■■□□ 2.84
SCARB1-211ENST00000546215 KIF14Q15058 1648 aa32.76■■■□□ 2.83
SCARB1-211ENST00000546215 MAP3K1Q13233 1512 aa32.75■■■□□ 2.83
SCARB1-211ENST00000546215 MTUS2Q5JR59 1369 aa32.74■■■□□ 2.83
SCARB1-211ENST00000546215 TTC37Q6PGP7 1564 aa32.72■■■□□ 2.83
SCARB1-211ENST00000546215 EHBP1L1Q8N3D4 1523 aa32.68■■■□□ 2.82
SCARB1-211ENST00000546215 APLP2Q06481 763 aa32.66■■■□□ 2.82
SCARB1-211ENST00000546215 TEX14Q8IWB6 1497 aa32.66■■■□□ 2.82
SCARB1-211ENST00000546215 LRRC9Q6ZRR7 1453 aa32.65■■■□□ 2.82
SCARB1-211ENST00000546215 KANK4Q5T7N3 995 aaPredicted RBP32.65■■■□□ 2.82
SCARB1-211ENST00000546215 PLCH2O75038 1416 aa32.6■■■□□ 2.81
SCARB1-211ENST00000546215 MYO5CQ9NQX4 1742 aa32.56■■■□□ 2.8
SCARB1-211ENST00000546215 ARAP3Q8WWN8 1544 aa32.53■■■□□ 2.8
SCARB1-211ENST00000546215 SUPT6HQ7KZ85 1726 aaKnown RBP32.52■■■□□ 2.8
SCARB1-211ENST00000546215 NEO1Q92859 1461 aa32.52■■■□□ 2.8
SCARB1-211ENST00000546215 FANCAO15360 1455 aa32.51■■■□□ 2.79
SCARB1-211ENST00000546215 NCOA2Q15596 1464 aa32.5■■■□□ 2.79
SCARB1-211ENST00000546215 GPATCH8Q9UKJ3 1502 aaKnown RBP32.5■■■□□ 2.79
SCARB1-211ENST00000546215 CDC42BPAQ5VT25 1732 aa32.5■■■□□ 2.79
SCARB1-211ENST00000546215 PHLDB1Q86UU1 1377 aa32.49■■■□□ 2.79
SCARB1-211ENST00000546215 CDC42BPBQ9Y5S2 1711 aa32.48■■■□□ 2.79
SCARB1-211ENST00000546215 CCNB3Q8WWL7 1395 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms