RNA–Protein interactions for RNA: ENST00000545748.5

NR4A1-206, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2 BASIC

Gene NR4A1, Length 3,511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-206ENST00000545748 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
NR4A1-206ENST00000545748 MIER1Q8N108 512 aa16.09■□□□□ 0.17
NR4A1-206ENST00000545748 CCNB3Q8WWL7 1395 aa16.09■□□□□ 0.17
NR4A1-206ENST00000545748 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
NR4A1-206ENST00000545748 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
NR4A1-206ENST00000545748 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
NR4A1-206ENST00000545748 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
NR4A1-206ENST00000545748 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
NR4A1-206ENST00000545748 GTF3C3Q9Y5Q9 886 aa16.05■□□□□ 0.16
NR4A1-206ENST00000545748 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.16
NR4A1-206ENST00000545748 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
NR4A1-206ENST00000545748 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
NR4A1-206ENST00000545748 KIF21BO75037 1637 aa16.03■□□□□ 0.16
NR4A1-206ENST00000545748 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
NR4A1-206ENST00000545748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
NR4A1-206ENST00000545748 FOXD1Q16676 465 aa15.99■□□□□ 0.15
NR4A1-206ENST00000545748 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
NR4A1-206ENST00000545748 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
NR4A1-206ENST00000545748 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
NR4A1-206ENST00000545748 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.15
NR4A1-206ENST00000545748 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
NR4A1-206ENST00000545748 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
NR4A1-206ENST00000545748 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
NR4A1-206ENST00000545748 CFDP1Q9UEE9 299 aaPredicted RBP15.93■□□□□ 0.14
NR4A1-206ENST00000545748 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
NR4A1-206ENST00000545748 RAB3GAP2Q9H2M9 1393 aa15.92■□□□□ 0.14
NR4A1-206ENST00000545748 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
NR4A1-206ENST00000545748 PLEKHD1A6NEE1 506 aa15.91■□□□□ 0.14
NR4A1-206ENST00000545748 BCANQ96GW7 911 aa15.91■□□□□ 0.14
NR4A1-206ENST00000545748 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
NR4A1-206ENST00000545748 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
NR4A1-206ENST00000545748 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
NR4A1-206ENST00000545748 PHLDB1Q86UU1 1377 aa15.86■□□□□ 0.13
NR4A1-206ENST00000545748 TSPY4P0CV99 314 aa15.85■□□□□ 0.13
NR4A1-206ENST00000545748 TSPY10P0CW01 314 aa15.85■□□□□ 0.13
NR4A1-206ENST00000545748 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
NR4A1-206ENST00000545748 ANP32CO43423 234 aa15.84■□□□□ 0.13
NR4A1-206ENST00000545748 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
NR4A1-206ENST00000545748 ZNF644Q9H582 1327 aaPredicted RBP15.81■□□□□ 0.12
NR4A1-206ENST00000545748 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
NR4A1-206ENST00000545748 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
NR4A1-206ENST00000545748 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
NR4A1-206ENST00000545748 NEFLP07196 543 aa15.8■□□□□ 0.12
NR4A1-206ENST00000545748 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
NR4A1-206ENST00000545748 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
NR4A1-206ENST00000545748 MYT1Q01538 1121 aa15.76■□□□□ 0.11
NR4A1-206ENST00000545748 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
NR4A1-206ENST00000545748 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
NR4A1-206ENST00000545748 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
NR4A1-206ENST00000545748 HNRNPMP52272 730 aaKnown RBP eCLIP15.72■□□□□ 0.11
NR4A1-206ENST00000545748 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
NR4A1-206ENST00000545748 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.11
NR4A1-206ENST00000545748 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.1
NR4A1-206ENST00000545748 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
NR4A1-206ENST00000545748 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
NR4A1-206ENST00000545748 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
NR4A1-206ENST00000545748 SALL2Q9Y467 1007 aaPredicted RBP15.67■□□□□ 0.1
NR4A1-206ENST00000545748 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
NR4A1-206ENST00000545748 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
NR4A1-206ENST00000545748 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
NR4A1-206ENST00000545748 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.093e-6■□□□□ 8.3
NR4A1-206ENST00000545748 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
NR4A1-206ENST00000545748 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.09
NR4A1-206ENST00000545748 PKD2Q13563 968 aa15.63■□□□□ 0.09
NR4A1-206ENST00000545748 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
NR4A1-206ENST00000545748 GRIN2BQ13224 1484 aa15.62■□□□□ 0.09
NR4A1-206ENST00000545748 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
NR4A1-206ENST00000545748 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
NR4A1-206ENST00000545748 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
NR4A1-206ENST00000545748 CASKIN1Q8WXD9 1431 aa15.59■□□□□ 0.09
NR4A1-206ENST00000545748 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
NR4A1-206ENST00000545748 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
NR4A1-206ENST00000545748 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
NR4A1-206ENST00000545748 PCF11O94913 1555 aaKnown RBP15.57■□□□□ 0.08
NR4A1-206ENST00000545748 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
NR4A1-206ENST00000545748 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
NR4A1-206ENST00000545748 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
NR4A1-206ENST00000545748 DCAF11Q8TEB1 546 aa15.56■□□□□ 0.08
NR4A1-206ENST00000545748 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
NR4A1-206ENST00000545748 PTPRGP23470 1445 aa15.55■□□□□ 0.08
NR4A1-206ENST00000545748 HSPA5P11021 654 aaKnown RBP15.54■□□□□ 0.08
NR4A1-206ENST00000545748 FKBP8Q14318 412 aa15.54■□□□□ 0.08
NR4A1-206ENST00000545748 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
NR4A1-206ENST00000545748 CCDC18Q5T9S5 1454 aa15.53■□□□□ 0.08
NR4A1-206ENST00000545748 NUP155O75694 1391 aa15.53■□□□□ 0.08
NR4A1-206ENST00000545748 PRG4Q92954 1404 aaPredicted RBP15.52■□□□□ 0.08
NR4A1-206ENST00000545748 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
NR4A1-206ENST00000545748 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
NR4A1-206ENST00000545748 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
NR4A1-206ENST00000545748 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
NR4A1-206ENST00000545748 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
NR4A1-206ENST00000545748 PLB1Q6P1J6 1458 aa15.47■□□□□ 0.07
NR4A1-206ENST00000545748 GGT6Q6P531 493 aa15.45■□□□□ 0.06
NR4A1-206ENST00000545748 EFCAB5A4FU69 1503 aa15.42■□□□□ 0.06
NR4A1-206ENST00000545748 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
NR4A1-206ENST00000545748 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
NR4A1-206ENST00000545748 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
NR4A1-206ENST00000545748 IQGAP2Q13576 1575 aa15.41■□□□□ 0.06
NR4A1-206ENST00000545748 EPRSP07814 1512 aaKnown RBP15.4■□□□□ 0.06
NR4A1-206ENST00000545748 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms