RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 CEP170Q5SW79 1584 aa18.65■□□□□ 0.58
SCNN1A-223ENST00000545605 UBTFP17480 764 aaKnown RBP18.65■□□□□ 0.58
SCNN1A-223ENST00000545605 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
SCNN1A-223ENST00000545605 CLIP1P30622 1438 aa18.64■□□□□ 0.57
SCNN1A-223ENST00000545605 NUP160Q12769 1436 aa18.6■□□□□ 0.57
SCNN1A-223ENST00000545605 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
SCNN1A-223ENST00000545605 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
SCNN1A-223ENST00000545605 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
SCNN1A-223ENST00000545605 ARAP1Q96P48 1450 aa18.56■□□□□ 0.56
SCNN1A-223ENST00000545605 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
SCNN1A-223ENST00000545605 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
SCNN1A-223ENST00000545605 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
SCNN1A-223ENST00000545605 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
SCNN1A-223ENST00000545605 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
SCNN1A-223ENST00000545605 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
SCNN1A-223ENST00000545605 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
SCNN1A-223ENST00000545605 DISP1Q96F81 1524 aa18.41■□□□□ 0.54
SCNN1A-223ENST00000545605 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
SCNN1A-223ENST00000545605 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
SCNN1A-223ENST00000545605 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
SCNN1A-223ENST00000545605 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
SCNN1A-223ENST00000545605 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
SCNN1A-223ENST00000545605 FBLN2P98095 1184 aa18.33■□□□□ 0.52
SCNN1A-223ENST00000545605 TIAM1Q13009 1591 aa18.31■□□□□ 0.52
SCNN1A-223ENST00000545605 MAP3K1Q13233 1512 aa18.31■□□□□ 0.52
SCNN1A-223ENST00000545605 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
SCNN1A-223ENST00000545605 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
SCNN1A-223ENST00000545605 RANGAP1P46060 587 aaPredicted RBP18.29■□□□□ 0.52
SCNN1A-223ENST00000545605 RAPGEF6Q8TEU7 1601 aa18.29■□□□□ 0.52
SCNN1A-223ENST00000545605 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
SCNN1A-223ENST00000545605 ABCA8O94911 1581 aa18.22■□□□□ 0.51
SCNN1A-223ENST00000545605 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-223ENST00000545605 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
SCNN1A-223ENST00000545605 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
SCNN1A-223ENST00000545605 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
SCNN1A-223ENST00000545605 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
SCNN1A-223ENST00000545605 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
SCNN1A-223ENST00000545605 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
SCNN1A-223ENST00000545605 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
SCNN1A-223ENST00000545605 ABCC2Q92887 1545 aa18.1■□□□□ 0.49
SCNN1A-223ENST00000545605 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
SCNN1A-223ENST00000545605 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
SCNN1A-223ENST00000545605 CDK13Q14004 1512 aaKnown RBP18.09■□□□□ 0.49
SCNN1A-223ENST00000545605 ADCY10Q96PN6 1610 aa18.09■□□□□ 0.49
SCNN1A-223ENST00000545605 APLP2Q06481 763 aa18.07■□□□□ 0.48
SCNN1A-223ENST00000545605 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
SCNN1A-223ENST00000545605 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
SCNN1A-223ENST00000545605 UHRF1BP1LA0JNW5 1464 aa18.05■□□□□ 0.48
SCNN1A-223ENST00000545605 PTPRGP23470 1445 aa18.05■□□□□ 0.48
SCNN1A-223ENST00000545605 UACAQ9BZF9 1416 aa18.02■□□□□ 0.48
SCNN1A-223ENST00000545605 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
SCNN1A-223ENST00000545605 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
SCNN1A-223ENST00000545605 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
SCNN1A-223ENST00000545605 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
SCNN1A-223ENST00000545605 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
SCNN1A-223ENST00000545605 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
SCNN1A-223ENST00000545605 KIF14Q15058 1648 aa17.98■□□□□ 0.47
SCNN1A-223ENST00000545605 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
SCNN1A-223ENST00000545605 KDM5BQ9UGL1 1544 aa17.95■□□□□ 0.46
SCNN1A-223ENST00000545605 ATP10BO94823 1461 aa17.93■□□□□ 0.46
SCNN1A-223ENST00000545605 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
SCNN1A-223ENST00000545605 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-223ENST00000545605 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
SCNN1A-223ENST00000545605 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-223ENST00000545605 TRIM26Q12899 539 aaPredicted RBP17.91■□□□□ 0.46
SCNN1A-223ENST00000545605 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
SCNN1A-223ENST00000545605 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-223ENST00000545605 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
SCNN1A-223ENST00000545605 TTBK1Q5TCY1 1321 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-223ENST00000545605 PREX2Q70Z35 1606 aa17.87■□□□□ 0.45
SCNN1A-223ENST00000545605 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
SCNN1A-223ENST00000545605 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
SCNN1A-223ENST00000545605 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
SCNN1A-223ENST00000545605 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.45
SCNN1A-223ENST00000545605 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
SCNN1A-223ENST00000545605 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
SCNN1A-223ENST00000545605 TTC37Q6PGP7 1564 aa17.82■□□□□ 0.44
SCNN1A-223ENST00000545605 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
SCNN1A-223ENST00000545605 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
SCNN1A-223ENST00000545605 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
SCNN1A-223ENST00000545605 WDR7Q9Y4E6 1490 aa17.78■□□□□ 0.44
SCNN1A-223ENST00000545605 MIA2Q96PC5 1412 aa17.78■□□□□ 0.44
SCNN1A-223ENST00000545605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCNN1A-223ENST00000545605 MAPKBP1O60336 1514 aa17.77■□□□□ 0.44
SCNN1A-223ENST00000545605 CROCC2H7BZ55 1655 aa17.77■□□□□ 0.44
SCNN1A-223ENST00000545605 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.44
SCNN1A-223ENST00000545605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.77■□□□□ 0.43
SCNN1A-223ENST00000545605 ABCA9Q8IUA7 1624 aa17.76■□□□□ 0.43
SCNN1A-223ENST00000545605 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
SCNN1A-223ENST00000545605 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
SCNN1A-223ENST00000545605 ARAP3Q8WWN8 1544 aa17.73■□□□□ 0.43
SCNN1A-223ENST00000545605 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
SCNN1A-223ENST00000545605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
SCNN1A-223ENST00000545605 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
SCNN1A-223ENST00000545605 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
SCNN1A-223ENST00000545605 ADGBQ8N7X0 1667 aa17.71■□□□□ 0.42
SCNN1A-223ENST00000545605 CAMSAP2Q08AD1 1489 aa17.69■□□□□ 0.42
SCNN1A-223ENST00000545605 GCC2Q8IWJ2 1684 aa17.69■□□□□ 0.42
SCNN1A-223ENST00000545605 PLEKHD1A6NEE1 506 aa17.69■□□□□ 0.42
SCNN1A-223ENST00000545605 ASXL2Q76L83 1435 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms