RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 MAGI1Q96QZ7 1491 aaPredicted RBP35.04■■■■□ 3.2
FOXA1-202ENST00000545425 CHMP7Q8WUX9 453 aaPredicted RBP34.99■■■■□ 3.19
FOXA1-202ENST00000545425 ABCA5Q8WWZ7 1642 aa34.96■■■■□ 3.19
FOXA1-202ENST00000545425 CHD1O14646 1710 aa34.95■■■■□ 3.19
FOXA1-202ENST00000545425 SYNJ2O15056 1496 aa34.91■■■■□ 3.18
FOXA1-202ENST00000545425 TTBK1Q5TCY1 1321 aaPredicted RBP34.89■■■■□ 3.18
FOXA1-202ENST00000545425 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
FOXA1-202ENST00000545425 ARAP1Q96P48 1450 aa34.83■■■■□ 3.17
FOXA1-202ENST00000545425 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
FOXA1-202ENST00000545425 RIMBP3CA6NJZ7 1639 aa34.71■■■■□ 3.15
FOXA1-202ENST00000545425 RIMBP3BA6NNM3 1639 aa34.71■■■■□ 3.15
FOXA1-202ENST00000545425 RIMBP3Q9UFD9 1639 aa34.71■■■■□ 3.15
FOXA1-202ENST00000545425 CLSPNQ9HAW4 1339 aa34.7■■■■□ 3.15
FOXA1-202ENST00000545425 DIEXFQ68CQ4 756 aaKnown RBP34.7■■■■□ 3.15
FOXA1-202ENST00000545425 FHAD1B1AJZ9 1412 aa34.69■■■■□ 3.14
FOXA1-202ENST00000545425 CLASP1Q7Z460 1538 aa34.66■■■■□ 3.14
FOXA1-202ENST00000545425 ADAMTS12P58397 1594 aa34.65■■■■□ 3.14
FOXA1-202ENST00000545425 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
FOXA1-202ENST00000545425 ZNF316A6NFI3 1004 aaPredicted RBP34.62■■■■□ 3.13
FOXA1-202ENST00000545425 MAP3K1Q13233 1512 aa34.6■■■■□ 3.13
FOXA1-202ENST00000545425 HNRNPUL2Q1KMD3 747 aaKnown RBP34.58■■■■□ 3.13
FOXA1-202ENST00000545425 RRBP1Q9P2E9 1410 aaKnown RBP34.57■■■■□ 3.12
FOXA1-202ENST00000545425 ARHGAP35Q9NRY4 1499 aa34.56■■■■□ 3.12
FOXA1-202ENST00000545425 IGF1RP08069 1367 aa34.54■■■■□ 3.12
FOXA1-202ENST00000545425 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
FOXA1-202ENST00000545425 NUP160Q12769 1436 aa34.51■■■■□ 3.11
FOXA1-202ENST00000545425 CENPBP07199 599 aaPredicted RBP34.45■■■■□ 3.11
FOXA1-202ENST00000545425 CARMIL1Q5VZK9 1371 aa34.42■■■■□ 3.1
FOXA1-202ENST00000545425 CEP170Q5SW79 1584 aa34.41■■■■□ 3.1
FOXA1-202ENST00000545425 RANGAP1P46060 587 aaPredicted RBP34.4■■■■□ 3.1
FOXA1-202ENST00000545425 ACIN1Q9UKV3 1341 aaKnown RBP34.4■■■■□ 3.1
FOXA1-202ENST00000545425 SCAF1Q9H7N4 1312 aaKnown RBP34.39■■■■□ 3.1
FOXA1-202ENST00000545425 CUL7Q14999 1698 aa34.31■■■■□ 3.08
FOXA1-202ENST00000545425 KANK4Q5T7N3 995 aaPredicted RBP34.3■■■■□ 3.08
FOXA1-202ENST00000545425 TIAM1Q13009 1591 aa34.3■■■■□ 3.08
FOXA1-202ENST00000545425 PELP1Q8IZL8 1130 aaKnown RBP34.3■■■■□ 3.08
FOXA1-202ENST00000545425 CCNB3Q8WWL7 1395 aa34.3■■■■□ 3.08
FOXA1-202ENST00000545425 DHX57Q6P158 1386 aaKnown RBP34.28■■■■□ 3.08
FOXA1-202ENST00000545425 EFCAB5A4FU69 1503 aa34.22■■■■□ 3.07
FOXA1-202ENST00000545425 JPH4Q96JJ6 628 aa34.22■■■■□ 3.07
FOXA1-202ENST00000545425 SHROOM2Q13796 1616 aa34.2■■■■□ 3.07
FOXA1-202ENST00000545425 CFAP43Q8NDM7 1665 aa34.17■■■■□ 3.06
FOXA1-202ENST00000545425 KIAA0586Q9BVV6 1533 aa34.14■■■■□ 3.06
FOXA1-202ENST00000545425 PRG4Q92954 1404 aaPredicted RBP34.13■■■■□ 3.05
FOXA1-202ENST00000545425 LRRC9Q6ZRR7 1453 aa34.12■■■■□ 3.05
FOXA1-202ENST00000545425 ERCC6L2Q5T890 1561 aa34.11■■■■□ 3.05
FOXA1-202ENST00000545425 NEUROD1Q13562 356 aa34.1■■■■□ 3.05
FOXA1-202ENST00000545425 FYCO1Q9BQS8 1478 aa34.05■■■■□ 3.04
FOXA1-202ENST00000545425 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
FOXA1-202ENST00000545425 PCF11O94913 1555 aaKnown RBP33.97■■■■□ 3.03
FOXA1-202ENST00000545425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.97■■■■□ 3.03
FOXA1-202ENST00000545425 CASKIN1Q8WXD9 1431 aa33.95■■■■□ 3.03
FOXA1-202ENST00000545425 TRHP20396 242 aaPredicted RBP33.91■■■■□ 3.02
FOXA1-202ENST00000545425 FMN1Q68DA7 1419 aa33.89■■■■□ 3.02
FOXA1-202ENST00000545425 SETD5Q9C0A6 1442 aa33.87■■■■□ 3.01
FOXA1-202ENST00000545425 IQGAP2Q13576 1575 aa33.84■■■■□ 3.01
FOXA1-202ENST00000545425 RAB3GAP2Q9H2M9 1393 aa33.83■■■■□ 3.01
FOXA1-202ENST00000545425 CARMIL2Q6F5E8 1435 aa33.82■■■■□ 3.01
FOXA1-202ENST00000545425 MIER1Q8N108 512 aa33.81■■■■□ 3
FOXA1-202ENST00000545425 PHLDB1Q86UU1 1377 aa33.8■■■■□ 3
FOXA1-202ENST00000545425 GTF3C3Q9Y5Q9 886 aa33.77■■■■□ 3
FOXA1-202ENST00000545425 SAMD9Q5K651 1589 aa33.76■■■■□ 3
FOXA1-202ENST00000545425 FHOD3Q2V2M9 1422 aa33.75■■■□□ 2.99
FOXA1-202ENST00000545425 TIMELESSQ9UNS1 1208 aa33.73■■■□□ 2.99
FOXA1-202ENST00000545425 PTPRGP23470 1445 aa33.72■■■□□ 2.99
FOXA1-202ENST00000545425 MAPKBP1O60336 1514 aa33.72■■■□□ 2.99
FOXA1-202ENST00000545425 NPM1P06748 294 aaKnown RBP eCLIP33.68■■■□□ 2.98
FOXA1-202ENST00000545425 UGGT2Q9NYU1 1516 aa33.68■■■□□ 2.98
FOXA1-202ENST00000545425 DISP1Q96F81 1524 aa33.64■■■□□ 2.98
FOXA1-202ENST00000545425 ITGAEP38570 1179 aa33.58■■■□□ 2.97
FOXA1-202ENST00000545425 FGD6Q6ZV73 1430 aa33.55■■■□□ 2.96
FOXA1-202ENST00000545425 ADCY10Q96PN6 1610 aa33.55■■■□□ 2.96
FOXA1-202ENST00000545425 FAM50AQ14320 339 aaKnown RBP33.53■■■□□ 2.96
FOXA1-202ENST00000545425 P3H3Q8IVL6 736 aa33.53■■■□□ 2.96
FOXA1-202ENST00000545425 EHBP1L1Q8N3D4 1523 aa33.5■■■□□ 2.95
FOXA1-202ENST00000545425 KIAA0556O60303 1618 aa33.5■■■□□ 2.95
FOXA1-202ENST00000545425 CCDC18Q5T9S5 1454 aa33.48■■■□□ 2.95
FOXA1-202ENST00000545425 MTUS2Q5JR59 1369 aa33.48■■■□□ 2.95
FOXA1-202ENST00000545425 UACAQ9BZF9 1416 aa33.47■■■□□ 2.95
FOXA1-202ENST00000545425 SUPT6HQ7KZ85 1726 aaKnown RBP33.46■■■□□ 2.95
FOXA1-202ENST00000545425 YTHDC1Q96MU7 727 aaKnown RBP33.45■■■□□ 2.95
FOXA1-202ENST00000545425 UHRF1BP1LA0JNW5 1464 aa33.44■■■□□ 2.94
FOXA1-202ENST00000545425 ATP1B4Q9UN42 357 aaPredicted RBP33.43■■■□□ 2.94
FOXA1-202ENST00000545425 ABCC2Q92887 1545 aa33.42■■■□□ 2.94
FOXA1-202ENST00000545425 HFM1A2PYH4 1435 aa33.4■■■□□ 2.94
FOXA1-202ENST00000545425 MYOM3Q5VTT5 1437 aa33.4■■■□□ 2.94
FOXA1-202ENST00000545425 LRRIQ1Q96JM4 1722 aa33.37■■■□□ 2.93
FOXA1-202ENST00000545425 NCOA2Q15596 1464 aa33.36■■■□□ 2.93
FOXA1-202ENST00000545425 ABCC10Q5T3U5 1492 aa33.36■■■□□ 2.93
FOXA1-202ENST00000545425 HECW1Q76N89 1606 aa33.35■■■□□ 2.93
FOXA1-202ENST00000545425 FAM69CQ0P6D2 419 aa33.34■■■□□ 2.93
FOXA1-202ENST00000545425 PTPN23Q9H3S7 1636 aa33.3■■■□□ 2.92
FOXA1-202ENST00000545425 KDM5BQ9UGL1 1544 aa33.27■■■□□ 2.92
FOXA1-202ENST00000545425 TCOF1Q13428 1488 aaKnown RBP33.26■■■□□ 2.92
FOXA1-202ENST00000545425 AKNAQ7Z591 1439 aa33.25■■■□□ 2.91
FOXA1-202ENST00000545425 PLB1Q6P1J6 1458 aa33.24■■■□□ 2.91
FOXA1-202ENST00000545425 KIF13AQ9H1H9 1805 aa33.23■■■□□ 2.91
FOXA1-202ENST00000545425 ASXL2Q76L83 1435 aa33.23■■■□□ 2.91
FOXA1-202ENST00000545425 DIP2BQ9P265 1576 aa33.22■■■□□ 2.91
FOXA1-202ENST00000545425 ABCA8O94911 1581 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms