RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FBLN2P98095 1184 aa21.95■■□□□ 1.1
SCARB1-209ENST00000545305 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
SCARB1-209ENST00000545305 CHD1O14646 1710 aa21.92■■□□□ 1.1
SCARB1-209ENST00000545305 IQGAP2Q13576 1575 aa21.9■■□□□ 1.1
SCARB1-209ENST00000545305 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
SCARB1-209ENST00000545305 NUP160Q12769 1436 aa21.87■■□□□ 1.09
SCARB1-209ENST00000545305 KIAA0586Q9BVV6 1533 aa21.86■■□□□ 1.09
SCARB1-209ENST00000545305 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
SCARB1-209ENST00000545305 ARHGAP35Q9NRY4 1499 aa21.82■■□□□ 1.08
SCARB1-209ENST00000545305 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
SCARB1-209ENST00000545305 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
SCARB1-209ENST00000545305 UGGT2Q9NYU1 1516 aa21.77■■□□□ 1.08
SCARB1-209ENST00000545305 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
SCARB1-209ENST00000545305 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
SCARB1-209ENST00000545305 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
SCARB1-209ENST00000545305 KIAA0556O60303 1618 aa21.67■■□□□ 1.06
SCARB1-209ENST00000545305 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
SCARB1-209ENST00000545305 CARMIL2Q6F5E8 1435 aa21.64■■□□□ 1.06
SCARB1-209ENST00000545305 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
SCARB1-209ENST00000545305 DISP1Q96F81 1524 aa21.64■■□□□ 1.05
SCARB1-209ENST00000545305 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
SCARB1-209ENST00000545305 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
SCARB1-209ENST00000545305 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-209ENST00000545305 PCF11O94913 1555 aaKnown RBP21.57■■□□□ 1.04
SCARB1-209ENST00000545305 APLP2Q06481 763 aa21.55■■□□□ 1.04
SCARB1-209ENST00000545305 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
SCARB1-209ENST00000545305 FYCO1Q9BQS8 1478 aa21.55■■□□□ 1.04
SCARB1-209ENST00000545305 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
SCARB1-209ENST00000545305 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
SCARB1-209ENST00000545305 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
SCARB1-209ENST00000545305 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-209ENST00000545305 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
SCARB1-209ENST00000545305 RAPGEF6Q8TEU7 1601 aa21.43■■□□□ 1.02
SCARB1-209ENST00000545305 CFAP43Q8NDM7 1665 aa21.43■■□□□ 1.02
SCARB1-209ENST00000545305 TIAM1Q13009 1591 aa21.42■■□□□ 1.02
SCARB1-209ENST00000545305 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
SCARB1-209ENST00000545305 PTPRGP23470 1445 aa21.41■■□□□ 1.02
SCARB1-209ENST00000545305 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
SCARB1-209ENST00000545305 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
SCARB1-209ENST00000545305 ABCA8O94911 1581 aa21.36■■□□□ 1.01
SCARB1-209ENST00000545305 PLB1Q6P1J6 1458 aa21.35■■□□□ 1.01
SCARB1-209ENST00000545305 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
SCARB1-209ENST00000545305 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
SCARB1-209ENST00000545305 EPRSP07814 1512 aaKnown RBP21.33■■□□□ 1
SCARB1-209ENST00000545305 NUP153P49790 1475 aaKnown RBP21.32■■□□□ 1
SCARB1-209ENST00000545305 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
SCARB1-209ENST00000545305 UACAQ9BZF9 1416 aa21.29■■□□□ 1
SCARB1-209ENST00000545305 CDK13Q14004 1512 aaKnown RBP21.28■■□□□ 1
SCARB1-209ENST00000545305 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
SCARB1-209ENST00000545305 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
SCARB1-209ENST00000545305 EHBP1L1Q8N3D4 1523 aa21.25■□□□□ 0.99
SCARB1-209ENST00000545305 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
SCARB1-209ENST00000545305 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
SCARB1-209ENST00000545305 TRIM26Q12899 539 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-209ENST00000545305 UHRF1BP1LA0JNW5 1464 aa21.22■□□□□ 0.99
SCARB1-209ENST00000545305 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
SCARB1-209ENST00000545305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-209ENST00000545305 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
SCARB1-209ENST00000545305 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-209ENST00000545305 ATP10BO94823 1461 aa21.17■□□□□ 0.98
SCARB1-209ENST00000545305 SUPT6HQ7KZ85 1726 aaKnown RBP21.17■□□□□ 0.98
SCARB1-209ENST00000545305 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
SCARB1-209ENST00000545305 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
SCARB1-209ENST00000545305 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
SCARB1-209ENST00000545305 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
SCARB1-209ENST00000545305 ADCY10Q96PN6 1610 aa21.14■□□□□ 0.97
SCARB1-209ENST00000545305 TROQ12816 1431 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-209ENST00000545305 ZCCHC11Q5TAX3 1644 aaKnown RBP21.11■□□□□ 0.97
SCARB1-209ENST00000545305 KDM5BQ9UGL1 1544 aa21.1■□□□□ 0.97
SCARB1-209ENST00000545305 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
SCARB1-209ENST00000545305 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
SCARB1-209ENST00000545305 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
SCARB1-209ENST00000545305 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
SCARB1-209ENST00000545305 KIF14Q15058 1648 aa21.05■□□□□ 0.96
SCARB1-209ENST00000545305 RRBP1Q9P2E9 1410 aaKnown RBP21.03■□□□□ 0.96
SCARB1-209ENST00000545305 MYOM3Q5VTT5 1437 aa21.01■□□□□ 0.95
SCARB1-209ENST00000545305 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
SCARB1-209ENST00000545305 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
SCARB1-209ENST00000545305 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
SCARB1-209ENST00000545305 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
SCARB1-209ENST00000545305 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
SCARB1-209ENST00000545305 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
SCARB1-209ENST00000545305 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
SCARB1-209ENST00000545305 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
SCARB1-209ENST00000545305 ASXL2Q76L83 1435 aa20.91■□□□□ 0.94
SCARB1-209ENST00000545305 PTPN23Q9H3S7 1636 aa20.9■□□□□ 0.94
SCARB1-209ENST00000545305 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
SCARB1-209ENST00000545305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.933e-11■■■□□ 17
SCARB1-209ENST00000545305 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
SCARB1-209ENST00000545305 TTC37Q6PGP7 1564 aa20.87■□□□□ 0.93
SCARB1-209ENST00000545305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.87■□□□□ 0.93
SCARB1-209ENST00000545305 GPATCH8Q9UKJ3 1502 aaKnown RBP20.87■□□□□ 0.93
SCARB1-209ENST00000545305 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
SCARB1-209ENST00000545305 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
SCARB1-209ENST00000545305 PREX2Q70Z35 1606 aa20.85■□□□□ 0.93
SCARB1-209ENST00000545305 MYO5CQ9NQX4 1742 aa20.84■□□□□ 0.93
SCARB1-209ENST00000545305 MAPKBP1O60336 1514 aa20.84■□□□□ 0.93
SCARB1-209ENST00000545305 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
SCARB1-209ENST00000545305 ABCA9Q8IUA7 1624 aa20.8■□□□□ 0.92
SCARB1-209ENST00000545305 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms