RNA–Protein interactions for RNA: ENST00000545186.1

PACRG-209, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-209ENST00000545186 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
PACRG-209ENST00000545186 SYNJ2O15056 1496 aa11.84□□□□□ -0.51
PACRG-209ENST00000545186 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
PACRG-209ENST00000545186 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
PACRG-209ENST00000545186 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
PACRG-209ENST00000545186 CUX1P39880 1505 aa11.79□□□□□ -0.52
PACRG-209ENST00000545186 ERCC6L2Q5T890 1561 aa11.78□□□□□ -0.52
PACRG-209ENST00000545186 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
PACRG-209ENST00000545186 ABCA5Q8WWZ7 1642 aa11.73□□□□□ -0.53
PACRG-209ENST00000545186 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
PACRG-209ENST00000545186 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
PACRG-209ENST00000545186 SHROOM2Q13796 1616 aa11.68□□□□□ -0.54
PACRG-209ENST00000545186 ADAMTS12P58397 1594 aa11.68□□□□□ -0.54
PACRG-209ENST00000545186 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
PACRG-209ENST00000545186 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
PACRG-209ENST00000545186 NUP160Q12769 1436 aa11.66□□□□□ -0.54
PACRG-209ENST00000545186 ZBTB22O15209 634 aa11.61□□□□□ -0.55
PACRG-209ENST00000545186 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
PACRG-209ENST00000545186 DCAF8L1A6NGE4 600 aa11.59□□□□□ -0.55
PACRG-209ENST00000545186 DIP2BQ9P265 1576 aa11.58□□□□□ -0.55
PACRG-209ENST00000545186 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
PACRG-209ENST00000545186 KDM6BO15054 1643 aa11.57□□□□□ -0.56
PACRG-209ENST00000545186 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
PACRG-209ENST00000545186 FAM69CQ0P6D2 419 aa11.57□□□□□ -0.56
PACRG-209ENST00000545186 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
PACRG-209ENST00000545186 PRG4Q92954 1404 aaPredicted RBP11.57□□□□□ -0.56
PACRG-209ENST00000545186 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
PACRG-209ENST00000545186 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
PACRG-209ENST00000545186 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
PACRG-209ENST00000545186 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
PACRG-209ENST00000545186 ADCY10Q96PN6 1610 aa11.53□□□□□ -0.56
PACRG-209ENST00000545186 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
PACRG-209ENST00000545186 RUSC2Q8N2Y8 1516 aa11.52□□□□□ -0.57
PACRG-209ENST00000545186 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
PACRG-209ENST00000545186 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
PACRG-209ENST00000545186 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
PACRG-209ENST00000545186 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
PACRG-209ENST00000545186 ADGRL1O94910 1474 aa11.43□□□□□ -0.58
PACRG-209ENST00000545186 PPRC1Q5VV67 1664 aaKnown RBP11.42□□□□□ -0.58
PACRG-209ENST00000545186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.41□□□□□ -0.58
PACRG-209ENST00000545186 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
PACRG-209ENST00000545186 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
PACRG-209ENST00000545186 KIAA0586Q9BVV6 1533 aa11.36□□□□□ -0.59
PACRG-209ENST00000545186 GLI2P10070 1586 aa11.35□□□□□ -0.59
PACRG-209ENST00000545186 CUL7Q14999 1698 aa11.35□□□□□ -0.59
PACRG-209ENST00000545186 ABCC2Q92887 1545 aa11.34□□□□□ -0.59
PACRG-209ENST00000545186 ASXL2Q76L83 1435 aa11.34□□□□□ -0.59
PACRG-209ENST00000545186 TTBK1Q5TCY1 1321 aaPredicted RBP11.33□□□□□ -0.6
PACRG-209ENST00000545186 PTPRGP23470 1445 aa11.32□□□□□ -0.6
PACRG-209ENST00000545186 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
PACRG-209ENST00000545186 COL17A1Q9UMD9 1497 aaPredicted RBP11.32□□□□□ -0.6
PACRG-209ENST00000545186 MAP3K4Q9Y6R4 1608 aa11.31□□□□□ -0.6
PACRG-209ENST00000545186 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
PACRG-209ENST00000545186 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
PACRG-209ENST00000545186 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
PACRG-209ENST00000545186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
PACRG-209ENST00000545186 ATXN8OSP0DMR3 200 aa11.27□□□□□ -0.61
PACRG-209ENST00000545186 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
PACRG-209ENST00000545186 UHRF1BP1LA0JNW5 1464 aa11.26□□□□□ -0.61
PACRG-209ENST00000545186 TEX14Q8IWB6 1497 aa11.26□□□□□ -0.61
PACRG-209ENST00000545186 IGF1RP08069 1367 aa11.26□□□□□ -0.61
PACRG-209ENST00000545186 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
PACRG-209ENST00000545186 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
PACRG-209ENST00000545186 ZCCHC11Q5TAX3 1644 aaKnown RBP11.24□□□□□ -0.61
PACRG-209ENST00000545186 KIF27Q86VH2 1401 aa11.24□□□□□ -0.61
PACRG-209ENST00000545186 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
PACRG-209ENST00000545186 KDM5BQ9UGL1 1544 aa11.22□□□□□ -0.61
PACRG-209ENST00000545186 FBXO41Q8TF61 875 aa11.21□□□□□ -0.61
PACRG-209ENST00000545186 DISP1Q96F81 1524 aa11.2□□□□□ -0.62
PACRG-209ENST00000545186 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
PACRG-209ENST00000545186 KIF21BO75037 1637 aa11.2□□□□□ -0.62
PACRG-209ENST00000545186 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
PACRG-209ENST00000545186 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
PACRG-209ENST00000545186 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
PACRG-209ENST00000545186 KIAA0556O60303 1618 aa11.17□□□□□ -0.62
PACRG-209ENST00000545186 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
PACRG-209ENST00000545186 UGGT2Q9NYU1 1516 aa11.14□□□□□ -0.63
PACRG-209ENST00000545186 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
PACRG-209ENST00000545186 CD109Q6YHK3 1445 aa11.12□□□□□ -0.63
PACRG-209ENST00000545186 APLP2Q06481 763 aa11.12□□□□□ -0.63
PACRG-209ENST00000545186 PTPRMP28827 1452 aa11.1□□□□□ -0.63
PACRG-209ENST00000545186 ADAMTSL3P82987 1691 aa11.1□□□□□ -0.63
PACRG-209ENST00000545186 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
PACRG-209ENST00000545186 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
PACRG-209ENST00000545186 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
PACRG-209ENST00000545186 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
PACRG-209ENST00000545186 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
PACRG-209ENST00000545186 ARAP3Q8WWN8 1544 aa11.06□□□□□ -0.64
PACRG-209ENST00000545186 CTTNBP2Q8WZ74 1663 aa11.06□□□□□ -0.64
PACRG-209ENST00000545186 ABCA8O94911 1581 aa11.06□□□□□ -0.64
PACRG-209ENST00000545186 BCORL1Q5H9F3 1711 aa11.05□□□□□ -0.64
PACRG-209ENST00000545186 RIMS1Q86UR5 1692 aaKnown RBP11.01□□□□□ -0.65
PACRG-209ENST00000545186 GOLGA3Q08378 1498 aa11□□□□□ -0.65
PACRG-209ENST00000545186 FRMPD1Q5SYB0 1578 aa11□□□□□ -0.65
PACRG-209ENST00000545186 ABCA9Q8IUA7 1624 aa11□□□□□ -0.65
PACRG-209ENST00000545186 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
PACRG-209ENST00000545186 RAPGEF3O95398 923 aa10.97□□□□□ -0.65
PACRG-209ENST00000545186 ARID4BQ4LE39 1312 aaPredicted RBP10.97□□□□□ -0.65
PACRG-209ENST00000545186 ARHGEF40Q8TER5 1519 aa10.96□□□□□ -0.65
PACRG-209ENST00000545186 PHLDB1Q86UU1 1377 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms