RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
CCDC7-210ENST00000545067 KIF21BO75037 1637 aa12.12□□□□□ -0.47
CCDC7-210ENST00000545067 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
CCDC7-210ENST00000545067 MYT1Q01538 1121 aa12.11□□□□□ -0.47
CCDC7-210ENST00000545067 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
CCDC7-210ENST00000545067 FOXD1Q16676 465 aa12.08□□□□□ -0.48
CCDC7-210ENST00000545067 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
CCDC7-210ENST00000545067 FHOD3Q2V2M9 1422 aa12.07□□□□□ -0.48
CCDC7-210ENST00000545067 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
CCDC7-210ENST00000545067 SETD5Q9C0A6 1442 aa12.06□□□□□ -0.48
CCDC7-210ENST00000545067 BICRAQ9NZM4 1560 aa12.05□□□□□ -0.48
CCDC7-210ENST00000545067 IGF1RP08069 1367 aa12.05□□□□□ -0.48
CCDC7-210ENST00000545067 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
CCDC7-210ENST00000545067 CADPSQ9ULU8 1353 aa12.04□□□□□ -0.48
CCDC7-210ENST00000545067 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
CCDC7-210ENST00000545067 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
CCDC7-210ENST00000545067 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
CCDC7-210ENST00000545067 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
CCDC7-210ENST00000545067 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
CCDC7-210ENST00000545067 CDK11AQ9UQ88 783 aaPredicted RBP12□□□□□ -0.49
CCDC7-210ENST00000545067 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC7-210ENST00000545067 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
CCDC7-210ENST00000545067 PHLDB1Q86UU1 1377 aa11.99□□□□□ -0.49
CCDC7-210ENST00000545067 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
CCDC7-210ENST00000545067 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
CCDC7-210ENST00000545067 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
CCDC7-210ENST00000545067 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
CCDC7-210ENST00000545067 CUX1P39880 1505 aa11.95□□□□□ -0.5
CCDC7-210ENST00000545067 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
CCDC7-210ENST00000545067 CHMP7Q8WUX9 453 aaPredicted RBP11.94□□□□□ -0.5
CCDC7-210ENST00000545067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC7-210ENST00000545067 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
CCDC7-210ENST00000545067 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
CCDC7-210ENST00000545067 TOP2BQ02880 1626 aa11.92□□□□□ -0.5
CCDC7-210ENST00000545067 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
CCDC7-210ENST00000545067 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
CCDC7-210ENST00000545067 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
CCDC7-210ENST00000545067 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
CCDC7-210ENST00000545067 RGL3Q3MIN7 710 aa11.89□□□□□ -0.51
CCDC7-210ENST00000545067 CFTRP13569 1480 aa11.89□□□□□ -0.51
CCDC7-210ENST00000545067 RRBP1Q9P2E9 1410 aaKnown RBP11.87□□□□□ -0.51
CCDC7-210ENST00000545067 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
CCDC7-210ENST00000545067 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
CCDC7-210ENST00000545067 MPHOSPH9Q99550 1183 aa11.86□□□□□ -0.51
CCDC7-210ENST00000545067 NESP48681 1621 aa11.86□□□□□ -0.51
CCDC7-210ENST00000545067 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
CCDC7-210ENST00000545067 TIMELESSQ9UNS1 1208 aa11.85□□□□□ -0.51
CCDC7-210ENST00000545067 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
CCDC7-210ENST00000545067 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
CCDC7-210ENST00000545067 ERICH3Q5RHP9 1530 aa11.85□□□□□ -0.51
CCDC7-210ENST00000545067 B4GALNT3Q6L9W6 998 aa11.85□□□□□ -0.51
CCDC7-210ENST00000545067 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
CCDC7-210ENST00000545067 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
CCDC7-210ENST00000545067 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
CCDC7-210ENST00000545067 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
CCDC7-210ENST00000545067 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
CCDC7-210ENST00000545067 PLEKHD1A6NEE1 506 aa11.8□□□□□ -0.52
CCDC7-210ENST00000545067 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
CCDC7-210ENST00000545067 PEG3Q9GZU2 1588 aa11.8□□□□□ -0.52
CCDC7-210ENST00000545067 SENP3Q9H4L4 574 aaPredicted RBP11.79□□□□□ -0.52
CCDC7-210ENST00000545067 CARD11Q9BXL7 1154 aa11.79□□□□□ -0.52
CCDC7-210ENST00000545067 ANP32EQ9BTT0 268 aa11.79□□□□□ -0.52
CCDC7-210ENST00000545067 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
CCDC7-210ENST00000545067 PKD2Q13563 968 aa11.78□□□□□ -0.52
CCDC7-210ENST00000545067 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.52
CCDC7-210ENST00000545067 NBR1Q14596 966 aa11.77□□□□□ -0.53
CCDC7-210ENST00000545067 WDR97A6NE52 1622 aa11.77□□□□□ -0.53
CCDC7-210ENST00000545067 DCAF11Q8TEB1 546 aa11.76□□□□□ -0.53
CCDC7-210ENST00000545067 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
CCDC7-210ENST00000545067 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
CCDC7-210ENST00000545067 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
CCDC7-210ENST00000545067 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
CCDC7-210ENST00000545067 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC7-210ENST00000545067 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
CCDC7-210ENST00000545067 GAPVD1Q14C86 1478 aa11.72□□□□□ -0.53
CCDC7-210ENST00000545067 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
CCDC7-210ENST00000545067 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
CCDC7-210ENST00000545067 RTL5Q5HYW3 569 aaPredicted RBP11.72□□□□□ -0.53
CCDC7-210ENST00000545067 WASHC2AQ641Q2 1341 aa11.71□□□□□ -0.53
CCDC7-210ENST00000545067 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
CCDC7-210ENST00000545067 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
CCDC7-210ENST00000545067 CC2D1BQ5T0F9 858 aaKnown RBP11.7□□□□□ -0.54
CCDC7-210ENST00000545067 NCOA2Q15596 1464 aa11.69□□□□□ -0.54
CCDC7-210ENST00000545067 ANP32AP39687 249 aaKnown RBP11.69□□□□□ -0.54
CCDC7-210ENST00000545067 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■■■■ 31.6
CCDC7-210ENST00000545067 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-210ENST00000545067 MYOM3Q5VTT5 1437 aa11.68□□□□□ -0.54
CCDC7-210ENST00000545067 TOPBP1Q92547 1522 aa11.68□□□□□ -0.54
CCDC7-210ENST00000545067 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
CCDC7-210ENST00000545067 CC2D2AQ9P2K1 1620 aa11.67□□□□□ -0.54
CCDC7-210ENST00000545067 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
CCDC7-210ENST00000545067 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
CCDC7-210ENST00000545067 NUP155O75694 1391 aa11.67□□□□□ -0.54
CCDC7-210ENST00000545067 NBPF8Q3BBV2 869 aa11.66□□□□□ -0.54
CCDC7-210ENST00000545067 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-210ENST00000545067 PCF11O94913 1555 aaKnown RBP11.66□□□□□ -0.54
CCDC7-210ENST00000545067 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
CCDC7-210ENST00000545067 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
CCDC7-210ENST00000545067 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
CCDC7-210ENST00000545067 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms