RNA–Protein interactions for RNA: ENST00000545065.1

KNTC1-214, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-214ENST00000545065 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
KNTC1-214ENST00000545065 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
KNTC1-214ENST00000545065 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
KNTC1-214ENST00000545065 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
KNTC1-214ENST00000545065 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
KNTC1-214ENST00000545065 NUP160Q12769 1436 aa16.19■□□□□ 0.18
KNTC1-214ENST00000545065 GRIN2AQ12879 1464 aa16.15■□□□□ 0.18
KNTC1-214ENST00000545065 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
KNTC1-214ENST00000545065 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
KNTC1-214ENST00000545065 PRG4Q92954 1404 aaPredicted RBP16.09■□□□□ 0.17
KNTC1-214ENST00000545065 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
KNTC1-214ENST00000545065 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
KNTC1-214ENST00000545065 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
KNTC1-214ENST00000545065 GLI2P10070 1586 aa16.02■□□□□ 0.16
KNTC1-214ENST00000545065 PTPRMP28827 1452 aa16.02■□□□□ 0.15
KNTC1-214ENST00000545065 KIF21BO75037 1637 aa16.01■□□□□ 0.15
KNTC1-214ENST00000545065 ADAMTS12P58397 1594 aa16■□□□□ 0.15
KNTC1-214ENST00000545065 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
KNTC1-214ENST00000545065 CUX1P39880 1505 aa15.95■□□□□ 0.14
KNTC1-214ENST00000545065 MAP3K4Q9Y6R4 1608 aa15.94■□□□□ 0.14
KNTC1-214ENST00000545065 HSPA2P54652 639 aa15.92■□□□□ 0.14
KNTC1-214ENST00000545065 JPH4Q96JJ6 628 aa15.91■□□□□ 0.14
KNTC1-214ENST00000545065 ASXL2Q76L83 1435 aa15.86■□□□□ 0.13
KNTC1-214ENST00000545065 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
KNTC1-214ENST00000545065 RUSC2Q8N2Y8 1516 aa15.83■□□□□ 0.12
KNTC1-214ENST00000545065 TEX14Q8IWB6 1497 aa15.82■□□□□ 0.12
KNTC1-214ENST00000545065 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
KNTC1-214ENST00000545065 PLB1Q6P1J6 1458 aa15.8■□□□□ 0.12
KNTC1-214ENST00000545065 EPRSP07814 1512 aaKnown RBP15.78■□□□□ 0.12
KNTC1-214ENST00000545065 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
KNTC1-214ENST00000545065 CUL7Q14999 1698 aa15.78■□□□□ 0.12
KNTC1-214ENST00000545065 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
KNTC1-214ENST00000545065 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
KNTC1-214ENST00000545065 MED1Q15648 1581 aaPredicted RBP15.74■□□□□ 0.11
KNTC1-214ENST00000545065 KIAA0586Q9BVV6 1533 aa15.72■□□□□ 0.11
KNTC1-214ENST00000545065 STRCQ7RTU9 1775 aa15.7■□□□□ 0.1
KNTC1-214ENST00000545065 RIMS1Q86UR5 1692 aaKnown RBP15.7■□□□□ 0.1
KNTC1-214ENST00000545065 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
KNTC1-214ENST00000545065 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
KNTC1-214ENST00000545065 PTPRGP23470 1445 aa15.59■□□□□ 0.09
KNTC1-214ENST00000545065 IQSEC2Q5JU85 1478 aa15.58■□□□□ 0.08
KNTC1-214ENST00000545065 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.08
KNTC1-214ENST00000545065 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
KNTC1-214ENST00000545065 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
KNTC1-214ENST00000545065 KDM5BQ9UGL1 1544 aa15.54■□□□□ 0.08
KNTC1-214ENST00000545065 YEATS2Q9ULM3 1422 aa15.54■□□□□ 0.08
KNTC1-214ENST00000545065 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
KNTC1-214ENST00000545065 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
KNTC1-214ENST00000545065 ARAP3Q8WWN8 1544 aa15.51■□□□□ 0.07
KNTC1-214ENST00000545065 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
KNTC1-214ENST00000545065 CD109Q6YHK3 1445 aa15.48■□□□□ 0.07
KNTC1-214ENST00000545065 SRCAPQ6ZRS2 3230 aa15.47■□□□□ 0.07
KNTC1-214ENST00000545065 PREX1Q8TCU6 1659 aa15.47■□□□□ 0.07
KNTC1-214ENST00000545065 UACAQ9BZF9 1416 aa15.45■□□□□ 0.06
KNTC1-214ENST00000545065 SIGLEC1Q9BZZ2 1709 aa15.45■□□□□ 0.06
KNTC1-214ENST00000545065 WDR7Q9Y4E6 1490 aa15.45■□□□□ 0.06
KNTC1-214ENST00000545065 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
KNTC1-214ENST00000545065 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
KNTC1-214ENST00000545065 PTPRTO14522 1441 aa15.43■□□□□ 0.06
KNTC1-214ENST00000545065 FRMPD1Q5SYB0 1578 aa15.42■□□□□ 0.06
KNTC1-214ENST00000545065 HSPA1LP34931 641 aa15.41■□□□□ 0.06
KNTC1-214ENST00000545065 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
KNTC1-214ENST00000545065 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
KNTC1-214ENST00000545065 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
KNTC1-214ENST00000545065 TTC37Q6PGP7 1564 aa15.39■□□□□ 0.05
KNTC1-214ENST00000545065 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
KNTC1-214ENST00000545065 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
KNTC1-214ENST00000545065 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
KNTC1-214ENST00000545065 RGS17Q9UGC6 210 aaPredicted RBP15.35■□□□□ 0.05
KNTC1-214ENST00000545065 ARHGEF40Q8TER5 1519 aa15.34■□□□□ 0.05
KNTC1-214ENST00000545065 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
KNTC1-214ENST00000545065 BIVM-ERCC5R4GMW8 1640 aa15.28■□□□□ 0.04
KNTC1-214ENST00000545065 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
KNTC1-214ENST00000545065 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
KNTC1-214ENST00000545065 DISP1Q96F81 1524 aa15.26■□□□□ 0.03
KNTC1-214ENST00000545065 SETD1BQ9UPS6 1966 aaKnown RBP15.25■□□□□ 0.03
KNTC1-214ENST00000545065 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
KNTC1-214ENST00000545065 ZNF335Q9H4Z2 1342 aaPredicted RBP15.22■□□□□ 0.03
KNTC1-214ENST00000545065 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
KNTC1-214ENST00000545065 FANCAO15360 1455 aa15.2■□□□□ 0.02
KNTC1-214ENST00000545065 RICTORQ6R327 1708 aa15.19■□□□□ 0.02
KNTC1-214ENST00000545065 NCOA1Q15788 1441 aa15.18■□□□□ 0.02
KNTC1-214ENST00000545065 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
KNTC1-214ENST00000545065 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
KNTC1-214ENST00000545065 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
KNTC1-214ENST00000545065 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
KNTC1-214ENST00000545065 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
KNTC1-214ENST00000545065 MLECQ14165 292 aa15.15■□□□□ 0.02
KNTC1-214ENST00000545065 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
KNTC1-214ENST00000545065 POTEAQ6S8J7 498 aa15.14■□□□□ 0.01
KNTC1-214ENST00000545065 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
KNTC1-214ENST00000545065 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
KNTC1-214ENST00000545065 NEO1Q92859 1461 aa15.14■□□□□ 0.01
KNTC1-214ENST00000545065 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
KNTC1-214ENST00000545065 KIAA0556O60303 1618 aa15.07■□□□□ 0
KNTC1-214ENST00000545065 IGF1RP08069 1367 aa15.07■□□□□ 0
KNTC1-214ENST00000545065 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
KNTC1-214ENST00000545065 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
KNTC1-214ENST00000545065 ABCA8O94911 1581 aa15.05■□□□□ -0
KNTC1-214ENST00000545065 C3P01024 1663 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms