RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
PAAF1-215ENST00000544909 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
PAAF1-215ENST00000544909 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
PAAF1-215ENST00000544909 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
PAAF1-215ENST00000544909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
PAAF1-215ENST00000544909 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.54
PAAF1-215ENST00000544909 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
PAAF1-215ENST00000544909 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
PAAF1-215ENST00000544909 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
PAAF1-215ENST00000544909 PCF11O94913 1555 aaKnown RBP18.38■□□□□ 0.53
PAAF1-215ENST00000544909 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
PAAF1-215ENST00000544909 NESP48681 1621 aa18.36■□□□□ 0.53
PAAF1-215ENST00000544909 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
PAAF1-215ENST00000544909 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
PAAF1-215ENST00000544909 SAMD9Q5K651 1589 aa18.32■□□□□ 0.52
PAAF1-215ENST00000544909 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
PAAF1-215ENST00000544909 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
PAAF1-215ENST00000544909 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
PAAF1-215ENST00000544909 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.51
PAAF1-215ENST00000544909 SETD5Q9C0A6 1442 aa18.26■□□□□ 0.51
PAAF1-215ENST00000544909 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
PAAF1-215ENST00000544909 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
PAAF1-215ENST00000544909 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
PAAF1-215ENST00000544909 RAB3GAP2Q9H2M9 1393 aa18.23■□□□□ 0.51
PAAF1-215ENST00000544909 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
PAAF1-215ENST00000544909 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
PAAF1-215ENST00000544909 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
PAAF1-215ENST00000544909 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
PAAF1-215ENST00000544909 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
PAAF1-215ENST00000544909 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
PAAF1-215ENST00000544909 EHBP1L1Q8N3D4 1523 aa18.15■□□□□ 0.5
PAAF1-215ENST00000544909 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
PAAF1-215ENST00000544909 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
PAAF1-215ENST00000544909 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
PAAF1-215ENST00000544909 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
PAAF1-215ENST00000544909 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
PAAF1-215ENST00000544909 SUPT6HQ7KZ85 1726 aaKnown RBP18.1■□□□□ 0.49
PAAF1-215ENST00000544909 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
PAAF1-215ENST00000544909 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
PAAF1-215ENST00000544909 IQGAP2Q13576 1575 aa18.08■□□□□ 0.49
PAAF1-215ENST00000544909 HECW1Q76N89 1606 aa18.08■□□□□ 0.48
PAAF1-215ENST00000544909 HFM1A2PYH4 1435 aa18.08■□□□□ 0.48
PAAF1-215ENST00000544909 MYOM3Q5VTT5 1437 aa18.07■□□□□ 0.48
PAAF1-215ENST00000544909 MIER1Q8N108 512 aa18.07■□□□□ 0.48
PAAF1-215ENST00000544909 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
PAAF1-215ENST00000544909 WDR62O43379 1518 aa18.04■□□□□ 0.48
PAAF1-215ENST00000544909 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
PAAF1-215ENST00000544909 AKNAQ7Z591 1439 aa18.04■□□□□ 0.48
PAAF1-215ENST00000544909 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
PAAF1-215ENST00000544909 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
PAAF1-215ENST00000544909 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
PAAF1-215ENST00000544909 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
PAAF1-215ENST00000544909 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
PAAF1-215ENST00000544909 ITGAEP38570 1179 aa18■□□□□ 0.47
PAAF1-215ENST00000544909 UACAQ9BZF9 1416 aa18■□□□□ 0.47
PAAF1-215ENST00000544909 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
PAAF1-215ENST00000544909 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
PAAF1-215ENST00000544909 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
PAAF1-215ENST00000544909 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
PAAF1-215ENST00000544909 KIAA0586Q9BVV6 1533 aa17.95■□□□□ 0.46
PAAF1-215ENST00000544909 EPRSP07814 1512 aaKnown RBP17.94■□□□□ 0.46
PAAF1-215ENST00000544909 NAIPQ13075 1403 aa17.93■□□□□ 0.46
PAAF1-215ENST00000544909 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
PAAF1-215ENST00000544909 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
PAAF1-215ENST00000544909 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
PAAF1-215ENST00000544909 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
PAAF1-215ENST00000544909 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
PAAF1-215ENST00000544909 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
PAAF1-215ENST00000544909 GRIN2AQ12879 1464 aa17.85■□□□□ 0.45
PAAF1-215ENST00000544909 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
PAAF1-215ENST00000544909 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.45
PAAF1-215ENST00000544909 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
PAAF1-215ENST00000544909 ROCK1Q13464 1354 aa17.82■□□□□ 0.44
PAAF1-215ENST00000544909 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
PAAF1-215ENST00000544909 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
PAAF1-215ENST00000544909 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
PAAF1-215ENST00000544909 RAPGEF6Q8TEU7 1601 aa17.79■□□□□ 0.44
PAAF1-215ENST00000544909 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
PAAF1-215ENST00000544909 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.43
PAAF1-215ENST00000544909 CDK13Q14004 1512 aaKnown RBP17.76■□□□□ 0.43
PAAF1-215ENST00000544909 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
PAAF1-215ENST00000544909 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
PAAF1-215ENST00000544909 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
PAAF1-215ENST00000544909 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
PAAF1-215ENST00000544909 NUP160Q12769 1436 aa17.72■□□□□ 0.43
PAAF1-215ENST00000544909 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
PAAF1-215ENST00000544909 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
PAAF1-215ENST00000544909 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
PAAF1-215ENST00000544909 DAPK1P53355 1430 aa17.7■□□□□ 0.42
PAAF1-215ENST00000544909 TROQ12816 1431 aaPredicted RBP17.7■□□□□ 0.42
PAAF1-215ENST00000544909 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
PAAF1-215ENST00000544909 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
PAAF1-215ENST00000544909 CEP170Q5SW79 1584 aa17.67■□□□□ 0.42
PAAF1-215ENST00000544909 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
PAAF1-215ENST00000544909 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
PAAF1-215ENST00000544909 ABCC5O15440 1437 aa17.63■□□□□ 0.41
PAAF1-215ENST00000544909 ADGBQ8N7X0 1667 aa17.61■□□□□ 0.41
PAAF1-215ENST00000544909 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
PAAF1-215ENST00000544909 CROCC2H7BZ55 1655 aa17.58■□□□□ 0.4
PAAF1-215ENST00000544909 SHANK2Q9UPX8 1470 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms