RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
CIT-216ENST00000544872 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
CIT-216ENST00000544872 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
CIT-216ENST00000544872 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
CIT-216ENST00000544872 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
CIT-216ENST00000544872 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
CIT-216ENST00000544872 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
CIT-216ENST00000544872 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
CIT-216ENST00000544872 NUP160Q12769 1436 aa16.31■□□□□ 0.2
CIT-216ENST00000544872 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
CIT-216ENST00000544872 ADCY10Q96PN6 1610 aa16.25■□□□□ 0.19
CIT-216ENST00000544872 COL17A1Q9UMD9 1497 aaPredicted RBP16.24■□□□□ 0.19
CIT-216ENST00000544872 PPRC1Q5VV67 1664 aaKnown RBP16.17■□□□□ 0.18
CIT-216ENST00000544872 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
CIT-216ENST00000544872 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
CIT-216ENST00000544872 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
CIT-216ENST00000544872 PTPRMP28827 1452 aa16.12■□□□□ 0.17
CIT-216ENST00000544872 TEX14Q8IWB6 1497 aa16.12■□□□□ 0.17
CIT-216ENST00000544872 CUX1P39880 1505 aa16.12■□□□□ 0.17
CIT-216ENST00000544872 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
CIT-216ENST00000544872 HSPA2P54652 639 aa16.11■□□□□ 0.17
CIT-216ENST00000544872 TTBK1Q5TCY1 1321 aaPredicted RBP16.11■□□□□ 0.17
CIT-216ENST00000544872 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
CIT-216ENST00000544872 ASXL2Q76L83 1435 aa16.09■□□□□ 0.17
CIT-216ENST00000544872 GLI2P10070 1586 aa16.09■□□□□ 0.17
CIT-216ENST00000544872 PLB1Q6P1J6 1458 aa16.08■□□□□ 0.16
CIT-216ENST00000544872 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
CIT-216ENST00000544872 KIF21BO75037 1637 aa16.03■□□□□ 0.16
CIT-216ENST00000544872 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
CIT-216ENST00000544872 ABCC2Q92887 1545 aa15.97■□□□□ 0.15
CIT-216ENST00000544872 PTPRGP23470 1445 aa15.95■□□□□ 0.14
CIT-216ENST00000544872 MAP3K4Q9Y6R4 1608 aa15.95■□□□□ 0.14
CIT-216ENST00000544872 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
CIT-216ENST00000544872 ARID4BQ4LE39 1312 aaPredicted RBP15.94■□□□□ 0.14
CIT-216ENST00000544872 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
CIT-216ENST00000544872 ADAMTSL3P82987 1691 aa15.91■□□□□ 0.14
CIT-216ENST00000544872 KIAA0586Q9BVV6 1533 aa15.89■□□□□ 0.13
CIT-216ENST00000544872 CUL7Q14999 1698 aa15.87■□□□□ 0.13
CIT-216ENST00000544872 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
CIT-216ENST00000544872 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
CIT-216ENST00000544872 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
CIT-216ENST00000544872 MADDQ8WXG6 1647 aa15.83■□□□□ 0.13
CIT-216ENST00000544872 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
CIT-216ENST00000544872 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
CIT-216ENST00000544872 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
CIT-216ENST00000544872 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
CIT-216ENST00000544872 RIMS1Q86UR5 1692 aaKnown RBP15.77■□□□□ 0.12
CIT-216ENST00000544872 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
CIT-216ENST00000544872 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
CIT-216ENST00000544872 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
CIT-216ENST00000544872 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
CIT-216ENST00000544872 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
CIT-216ENST00000544872 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
CIT-216ENST00000544872 UHRF1BP1LA0JNW5 1464 aa15.74■□□□□ 0.11
CIT-216ENST00000544872 YEATS2Q9ULM3 1422 aa15.73■□□□□ 0.11
CIT-216ENST00000544872 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
CIT-216ENST00000544872 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
CIT-216ENST00000544872 WDR7Q9Y4E6 1490 aa15.7■□□□□ 0.1
CIT-216ENST00000544872 KDM5BQ9UGL1 1544 aa15.69■□□□□ 0.1
CIT-216ENST00000544872 IGF1RP08069 1367 aa15.69■□□□□ 0.1
CIT-216ENST00000544872 ZCCHC11Q5TAX3 1644 aaKnown RBP15.67■□□□□ 0.1
CIT-216ENST00000544872 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
CIT-216ENST00000544872 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
CIT-216ENST00000544872 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
CIT-216ENST00000544872 ARAP3Q8WWN8 1544 aa15.65■□□□□ 0.1
CIT-216ENST00000544872 CFAP43Q8NDM7 1665 aa15.64■□□□□ 0.09
CIT-216ENST00000544872 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
CIT-216ENST00000544872 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
CIT-216ENST00000544872 EEA1Q15075 1411 aa15.63■□□□□ 0.09
CIT-216ENST00000544872 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
CIT-216ENST00000544872 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
CIT-216ENST00000544872 MLECQ14165 292 aa15.59■□□□□ 0.09
CIT-216ENST00000544872 STRCQ7RTU9 1775 aa15.58■□□□□ 0.08
CIT-216ENST00000544872 HSPA1LP34931 641 aa15.57■□□□□ 0.08
CIT-216ENST00000544872 PTPRTO14522 1441 aa15.57■□□□□ 0.08
CIT-216ENST00000544872 LTBP4Q8N2S1 1624 aa15.57■□□□□ 0.08
CIT-216ENST00000544872 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
CIT-216ENST00000544872 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
CIT-216ENST00000544872 PREX1Q8TCU6 1659 aa15.53■□□□□ 0.08
CIT-216ENST00000544872 PHLDB1Q86UU1 1377 aa15.52■□□□□ 0.08
CIT-216ENST00000544872 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
CIT-216ENST00000544872 FANCAO15360 1455 aa15.5■□□□□ 0.07
CIT-216ENST00000544872 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
CIT-216ENST00000544872 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
CIT-216ENST00000544872 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
CIT-216ENST00000544872 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
CIT-216ENST00000544872 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
CIT-216ENST00000544872 IQGAP2Q13576 1575 aa15.43■□□□□ 0.06
CIT-216ENST00000544872 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
CIT-216ENST00000544872 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
CIT-216ENST00000544872 ZNF335Q9H4Z2 1342 aaPredicted RBP15.43■□□□□ 0.06
CIT-216ENST00000544872 PRXQ9BXM0 1461 aa15.42■□□□□ 0.06
CIT-216ENST00000544872 FRMPD1Q5SYB0 1578 aa15.4■□□□□ 0.06
CIT-216ENST00000544872 TOM1O60784 492 aa15.39■□□□□ 0.05
CIT-216ENST00000544872 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
CIT-216ENST00000544872 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
CIT-216ENST00000544872 NEO1Q92859 1461 aa15.38■□□□□ 0.05
CIT-216ENST00000544872 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
CIT-216ENST00000544872 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.05
CIT-216ENST00000544872 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms