RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
PDCD2-212ENST00000544755 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
PDCD2-212ENST00000544755 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
PDCD2-212ENST00000544755 JPH4Q96JJ6 628 aa25.53■■□□□ 1.68
PDCD2-212ENST00000544755 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
PDCD2-212ENST00000544755 IQGAP2Q13576 1575 aa25.5■■□□□ 1.67
PDCD2-212ENST00000544755 PRG4Q92954 1404 aaPredicted RBP25.5■■□□□ 1.67
PDCD2-212ENST00000544755 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
PDCD2-212ENST00000544755 CTTNBP2Q8WZ74 1663 aa25.45■■□□□ 1.66
PDCD2-212ENST00000544755 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
PDCD2-212ENST00000544755 CARMIL2Q6F5E8 1435 aa25.4■■□□□ 1.66
PDCD2-212ENST00000544755 UGGT2Q9NYU1 1516 aa25.36■■□□□ 1.65
PDCD2-212ENST00000544755 KIF21BO75037 1637 aa25.33■■□□□ 1.65
PDCD2-212ENST00000544755 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
PDCD2-212ENST00000544755 TNIKQ9UKE5 1360 aa25.26■■□□□ 1.63
PDCD2-212ENST00000544755 DISP1Q96F81 1524 aa25.24■■□□□ 1.63
PDCD2-212ENST00000544755 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
PDCD2-212ENST00000544755 KIAA0556O60303 1618 aa25.23■■□□□ 1.63
PDCD2-212ENST00000544755 PTPRGP23470 1445 aa25.21■■□□□ 1.63
PDCD2-212ENST00000544755 ADCY10Q96PN6 1610 aa25.12■■□□□ 1.61
PDCD2-212ENST00000544755 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDCD2-212ENST00000544755 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
PDCD2-212ENST00000544755 SAMD9Q5K651 1589 aa25.07■■□□□ 1.6
PDCD2-212ENST00000544755 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
PDCD2-212ENST00000544755 MAPKBP1O60336 1514 aa25.05■■□□□ 1.6
PDCD2-212ENST00000544755 ABCC2Q92887 1545 aa25.05■■□□□ 1.6
PDCD2-212ENST00000544755 EFCAB5A4FU69 1503 aa25.04■■□□□ 1.6
PDCD2-212ENST00000544755 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
PDCD2-212ENST00000544755 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
PDCD2-212ENST00000544755 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
PDCD2-212ENST00000544755 KDM5BQ9UGL1 1544 aa24.95■■□□□ 1.58
PDCD2-212ENST00000544755 ABCA8O94911 1581 aa24.94■■□□□ 1.58
PDCD2-212ENST00000544755 PLB1Q6P1J6 1458 aa24.89■■□□□ 1.58
PDCD2-212ENST00000544755 ABCC10Q5T3U5 1492 aa24.89■■□□□ 1.57
PDCD2-212ENST00000544755 ZCCHC11Q5TAX3 1644 aaKnown RBP24.87■■□□□ 1.57
PDCD2-212ENST00000544755 KIF13AQ9H1H9 1805 aa24.87■■□□□ 1.57
PDCD2-212ENST00000544755 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
PDCD2-212ENST00000544755 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
PDCD2-212ENST00000544755 RAPGEF6Q8TEU7 1601 aa24.84■■□□□ 1.57
PDCD2-212ENST00000544755 FHOD3Q2V2M9 1422 aa24.82■■□□□ 1.56
PDCD2-212ENST00000544755 ASXL2Q76L83 1435 aa24.82■■□□□ 1.56
PDCD2-212ENST00000544755 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
PDCD2-212ENST00000544755 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
PDCD2-212ENST00000544755 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
PDCD2-212ENST00000544755 ARHGAP35Q9NRY4 1499 aa24.77■■□□□ 1.56
PDCD2-212ENST00000544755 GLI2P10070 1586 aa24.76■■□□□ 1.55
PDCD2-212ENST00000544755 FAM69CQ0P6D2 419 aa24.75■■□□□ 1.55
PDCD2-212ENST00000544755 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
PDCD2-212ENST00000544755 ATP10BO94823 1461 aa24.7■■□□□ 1.54
PDCD2-212ENST00000544755 EPRSP07814 1512 aaKnown RBP24.69■■□□□ 1.54
PDCD2-212ENST00000544755 NUP153P49790 1475 aaKnown RBP24.69■■□□□ 1.54
PDCD2-212ENST00000544755 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
PDCD2-212ENST00000544755 CLIP1P30622 1438 aa24.66■■□□□ 1.54
PDCD2-212ENST00000544755 MAP3K4Q9Y6R4 1608 aa24.62■■□□□ 1.53
PDCD2-212ENST00000544755 CFAP43Q8NDM7 1665 aa24.61■■□□□ 1.53
PDCD2-212ENST00000544755 TSPOAP1O95153 1857 aa24.59■■□□□ 1.53
PDCD2-212ENST00000544755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.58■■□□□ 1.53
PDCD2-212ENST00000544755 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.53
PDCD2-212ENST00000544755 TEX14Q8IWB6 1497 aa24.58■■□□□ 1.52
PDCD2-212ENST00000544755 CASKIN1Q8WXD9 1431 aa24.53■■□□□ 1.52
PDCD2-212ENST00000544755 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
PDCD2-212ENST00000544755 ARID3CA6NKF2 412 aa24.53■■□□□ 1.52
PDCD2-212ENST00000544755 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
PDCD2-212ENST00000544755 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
PDCD2-212ENST00000544755 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
PDCD2-212ENST00000544755 ABCA9Q8IUA7 1624 aa24.51■■□□□ 1.51
PDCD2-212ENST00000544755 PPRC1Q5VV67 1664 aaKnown RBP24.51■■□□□ 1.51
PDCD2-212ENST00000544755 CDK11AQ9UQ88 783 aaPredicted RBP24.51■■□□□ 1.51
PDCD2-212ENST00000544755 KCNH8Q96L42 1107 aa24.5■■□□□ 1.51
PDCD2-212ENST00000544755 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
PDCD2-212ENST00000544755 MAGI3Q5TCQ9 1506 aa24.49■■□□□ 1.51
PDCD2-212ENST00000544755 PCF11O94913 1555 aaKnown RBP24.49■■□□□ 1.51
PDCD2-212ENST00000544755 CDK13Q14004 1512 aaKnown RBP24.47■■□□□ 1.51
PDCD2-212ENST00000544755 KDM6BO15054 1643 aa24.46■■□□□ 1.51
PDCD2-212ENST00000544755 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
PDCD2-212ENST00000544755 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
PDCD2-212ENST00000544755 PHLDB1Q86UU1 1377 aa24.4■■□□□ 1.5
PDCD2-212ENST00000544755 LOC105371045A0A1W2PR82 267 aa24.39■■□□□ 1.49
PDCD2-212ENST00000544755 TROQ12816 1431 aaPredicted RBP24.37■■□□□ 1.49
PDCD2-212ENST00000544755 KIF14Q15058 1648 aa24.36■■□□□ 1.49
PDCD2-212ENST00000544755 CFAP74Q9C0B2 1584 aa24.35■■□□□ 1.49
PDCD2-212ENST00000544755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.495e-36■■■□□ 15.9
PDCD2-212ENST00000544755 NEO1Q92859 1461 aa24.33■■□□□ 1.49
PDCD2-212ENST00000544755 TTC37Q6PGP7 1564 aa24.3■■□□□ 1.48
PDCD2-212ENST00000544755 ARAP3Q8WWN8 1544 aa24.29■■□□□ 1.48
PDCD2-212ENST00000544755 MYO5CQ9NQX4 1742 aa24.28■■□□□ 1.48
PDCD2-212ENST00000544755 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.48
PDCD2-212ENST00000544755 FANCAO15360 1455 aa24.22■■□□□ 1.47
PDCD2-212ENST00000544755 PLCH2O75038 1416 aa24.22■■□□□ 1.47
PDCD2-212ENST00000544755 COL17A1Q9UMD9 1497 aaPredicted RBP24.19■■□□□ 1.46
PDCD2-212ENST00000544755 MTUS2Q5JR59 1369 aa24.18■■□□□ 1.46
PDCD2-212ENST00000544755 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
PDCD2-212ENST00000544755 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
PDCD2-212ENST00000544755 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
PDCD2-212ENST00000544755 PREX2Q70Z35 1606 aa24.15■■□□□ 1.46
PDCD2-212ENST00000544755 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
PDCD2-212ENST00000544755 TIAM1Q13009 1591 aa24.14■■□□□ 1.45
PDCD2-212ENST00000544755 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
PDCD2-212ENST00000544755 DENND4BO75064 1496 aaPredicted RBP24.12■■□□□ 1.45
PDCD2-212ENST00000544755 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms