RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
CDCA3-209ENST00000544610 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
CDCA3-209ENST00000544610 ABCA5Q8WWZ7 1642 aa11.68□□□□□ -0.54
CDCA3-209ENST00000544610 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
CDCA3-209ENST00000544610 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
CDCA3-209ENST00000544610 ADAMTS12P58397 1594 aa11.6□□□□□ -0.55
CDCA3-209ENST00000544610 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
CDCA3-209ENST00000544610 KCNA4P22459 653 aa11.59□□□□□ -0.55
CDCA3-209ENST00000544610 BIVM-ERCC5R4GMW8 1640 aa11.59□□□□□ -0.55
CDCA3-209ENST00000544610 TOP2BQ02880 1626 aa11.58□□□□□ -0.56
CDCA3-209ENST00000544610 NUP160Q12769 1436 aa11.58□□□□□ -0.56
CDCA3-209ENST00000544610 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
CDCA3-209ENST00000544610 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
CDCA3-209ENST00000544610 ERCC6L2Q5T890 1561 aa11.56□□□□□ -0.56
CDCA3-209ENST00000544610 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
CDCA3-209ENST00000544610 SHROOM2Q13796 1616 aa11.54□□□□□ -0.56
CDCA3-209ENST00000544610 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
CDCA3-209ENST00000544610 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-209ENST00000544610 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
CDCA3-209ENST00000544610 PRG4Q92954 1404 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-209ENST00000544610 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
CDCA3-209ENST00000544610 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
CDCA3-209ENST00000544610 MAPKBP1O60336 1514 aa11.37□□□□□ -0.59
CDCA3-209ENST00000544610 KIAA0586Q9BVV6 1533 aa11.35□□□□□ -0.59
CDCA3-209ENST00000544610 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
CDCA3-209ENST00000544610 CUL7Q14999 1698 aa11.35□□□□□ -0.59
CDCA3-209ENST00000544610 ADCY10Q96PN6 1610 aa11.35□□□□□ -0.59
CDCA3-209ENST00000544610 IGF1RP08069 1367 aa11.34□□□□□ -0.59
CDCA3-209ENST00000544610 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
CDCA3-209ENST00000544610 DIP2BQ9P265 1576 aa11.33□□□□□ -0.6
CDCA3-209ENST00000544610 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDCA3-209ENST00000544610 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
CDCA3-209ENST00000544610 CARMIL1Q5VZK9 1371 aa11.25□□□□□ -0.61
CDCA3-209ENST00000544610 PTPRGP23470 1445 aa11.24□□□□□ -0.61
CDCA3-209ENST00000544610 KDM6BO15054 1643 aa11.24□□□□□ -0.61
CDCA3-209ENST00000544610 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
CDCA3-209ENST00000544610 IQGAP2Q13576 1575 aa11.23□□□□□ -0.61
CDCA3-209ENST00000544610 CARMIL2Q6F5E8 1435 aa11.22□□□□□ -0.61
CDCA3-209ENST00000544610 ABCC2Q92887 1545 aa11.22□□□□□ -0.61
CDCA3-209ENST00000544610 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
CDCA3-209ENST00000544610 DISP1Q96F81 1524 aa11.19□□□□□ -0.62
CDCA3-209ENST00000544610 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
CDCA3-209ENST00000544610 GLI2P10070 1586 aa11.19□□□□□ -0.62
CDCA3-209ENST00000544610 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
CDCA3-209ENST00000544610 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
CDCA3-209ENST00000544610 TSPOAP1O95153 1857 aa11.18□□□□□ -0.62
CDCA3-209ENST00000544610 UACAQ9BZF9 1416 aa11.17□□□□□ -0.62
CDCA3-209ENST00000544610 UGGT2Q9NYU1 1516 aa11.16□□□□□ -0.62
CDCA3-209ENST00000544610 RAPGEF2Q9Y4G8 1499 aa11.16□□□□□ -0.62
CDCA3-209ENST00000544610 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
CDCA3-209ENST00000544610 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
CDCA3-209ENST00000544610 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-209ENST00000544610 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
CDCA3-209ENST00000544610 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
CDCA3-209ENST00000544610 KIAA0556O60303 1618 aa11.14□□□□□ -0.63
CDCA3-209ENST00000544610 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-209ENST00000544610 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
CDCA3-209ENST00000544610 MAP3K4Q9Y6R4 1608 aa11.12□□□□□ -0.63
CDCA3-209ENST00000544610 ZCCHC11Q5TAX3 1644 aaKnown RBP11.11□□□□□ -0.63
CDCA3-209ENST00000544610 TEX14Q8IWB6 1497 aa11.08□□□□□ -0.64
CDCA3-209ENST00000544610 COL17A1Q9UMD9 1497 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-209ENST00000544610 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
CDCA3-209ENST00000544610 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
CDCA3-209ENST00000544610 WDR7Q9Y4E6 1490 aa11.07□□□□□ -0.64
CDCA3-209ENST00000544610 ADGRL1O94910 1474 aa11.06□□□□□ -0.64
CDCA3-209ENST00000544610 GOLGA3Q08378 1498 aa11.05□□□□□ -0.64
CDCA3-209ENST00000544610 ABCA8O94911 1581 aa11.04□□□□□ -0.64
CDCA3-209ENST00000544610 PRXQ9BXM0 1461 aa11.04□□□□□ -0.64
CDCA3-209ENST00000544610 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
CDCA3-209ENST00000544610 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
CDCA3-209ENST00000544610 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
CDCA3-209ENST00000544610 CD109Q6YHK3 1445 aa10.99□□□□□ -0.65
CDCA3-209ENST00000544610 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
CDCA3-209ENST00000544610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.657e-9■■■□□ 17.5
CDCA3-209ENST00000544610 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
CDCA3-209ENST00000544610 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
CDCA3-209ENST00000544610 SAMD9Q5K651 1589 aa10.94□□□□□ -0.66
CDCA3-209ENST00000544610 ATP10BO94823 1461 aa10.93□□□□□ -0.66
CDCA3-209ENST00000544610 DSG3P32926 999 aa10.93□□□□□ -0.66
CDCA3-209ENST00000544610 ARAP3Q8WWN8 1544 aa10.93□□□□□ -0.66
CDCA3-209ENST00000544610 ABCA9Q8IUA7 1624 aa10.91□□□□□ -0.66
CDCA3-209ENST00000544610 KIF21BO75037 1637 aa10.91□□□□□ -0.66
CDCA3-209ENST00000544610 RAPGEF6Q8TEU7 1601 aa10.89□□□□□ -0.67
CDCA3-209ENST00000544610 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-209ENST00000544610 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-209ENST00000544610 PHLDB1Q86UU1 1377 aa10.89□□□□□ -0.67
CDCA3-209ENST00000544610 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
CDCA3-209ENST00000544610 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
CDCA3-209ENST00000544610 NEO1Q92859 1461 aa10.87□□□□□ -0.67
CDCA3-209ENST00000544610 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
CDCA3-209ENST00000544610 EEA1Q15075 1411 aa10.85□□□□□ -0.67
CDCA3-209ENST00000544610 FRMPD1Q5SYB0 1578 aa10.85□□□□□ -0.67
CDCA3-209ENST00000544610 ADAMTSL3P82987 1691 aa10.83□□□□□ -0.68
CDCA3-209ENST00000544610 FHOD3Q2V2M9 1422 aa10.83□□□□□ -0.68
CDCA3-209ENST00000544610 RAPGEF3O95398 923 aa10.82□□□□□ -0.68
CDCA3-209ENST00000544610 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
CDCA3-209ENST00000544610 PTPRMP28827 1452 aa10.81□□□□□ -0.68
CDCA3-209ENST00000544610 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
CDCA3-209ENST00000544610 EFCAB5A4FU69 1503 aa10.8□□□□□ -0.68
CDCA3-209ENST00000544610 ARHGEF40Q8TER5 1519 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms