RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 PHLDB1Q86UU1 1377 aa5.55□□□□□ -1.52
BRCA2-206ENST00000544455 GTF3C3Q9Y5Q9 886 aa5.55□□□□□ -1.52
BRCA2-206ENST00000544455 URB2Q14146 1524 aaKnown RBP5.55□□□□□ -1.52
BRCA2-206ENST00000544455 CCNB3Q8WWL7 1395 aa5.54□□□□□ -1.52
BRCA2-206ENST00000544455 ACIN1Q9UKV3 1341 aaKnown RBP5.54□□□□□ -1.52
BRCA2-206ENST00000544455 FBLN2P98095 1184 aa5.53□□□□□ -1.52
BRCA2-206ENST00000544455 AQRO60306 1485 aaKnown RBP eCLIP5.53□□□□□ -1.52
BRCA2-206ENST00000544455 CHIC2Q9UKJ5 165 aa5.53□□□□□ -1.52
BRCA2-206ENST00000544455 RAB3GAP2Q9H2M9 1393 aa5.52□□□□□ -1.53
BRCA2-206ENST00000544455 RRBP1Q9P2E9 1410 aaKnown RBP5.52□□□□□ -1.53
BRCA2-206ENST00000544455 LRRC9Q6ZRR7 1453 aa5.5□□□□□ -1.53
BRCA2-206ENST00000544455 DNMBPQ6XZF7 1577 aa5.5□□□□□ -1.53
BRCA2-206ENST00000544455 ABCA10Q8WWZ4 1543 aa5.5□□□□□ -1.53
BRCA2-206ENST00000544455 KCNH8Q96L42 1107 aa5.5□□□□□ -1.53
BRCA2-206ENST00000544455 PCF11O94913 1555 aaKnown RBP5.49□□□□□ -1.53
BRCA2-206ENST00000544455 RRP7BPQ9NSQ0 103 aa5.49□□□□□ -1.53
BRCA2-206ENST00000544455 MTUS2Q5JR59 1369 aa5.49□□□□□ -1.53
BRCA2-206ENST00000544455 PDS5BQ9NTI5 1447 aa5.49□□□□□ -1.53
BRCA2-206ENST00000544455 GAPVD1Q14C86 1478 aa5.48□□□□□ -1.53
BRCA2-206ENST00000544455 TIAM1Q13009 1591 aa5.48□□□□□ -1.53
BRCA2-206ENST00000544455 CENPBP07199 599 aaPredicted RBP5.48□□□□□ -1.53
BRCA2-206ENST00000544455 ZNF608Q9ULD9 1512 aaPredicted RBP5.47□□□□□ -1.53
BRCA2-206ENST00000544455 SETD5Q9C0A6 1442 aa5.46□□□□□ -1.53
BRCA2-206ENST00000544455 FOXD1Q16676 465 aa5.46□□□□□ -1.53
BRCA2-206ENST00000544455 TRIM52Q96A61 297 aa5.46□□□□□ -1.54
BRCA2-206ENST00000544455 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
BRCA2-206ENST00000544455 FHAD1B1AJZ9 1412 aa5.46□□□□□ -1.54
BRCA2-206ENST00000544455 PTPRKQ15262 1439 aa5.46□□□□□ -1.54
BRCA2-206ENST00000544455 ZNF644Q9H582 1327 aaPredicted RBP5.44□□□□□ -1.54
BRCA2-206ENST00000544455 ZNF777Q9ULD5 760 aaPredicted RBP5.44□□□□□ -1.54
BRCA2-206ENST00000544455 CNGB1Q14028 1251 aaPredicted RBP5.44□□□□□ -1.54
BRCA2-206ENST00000544455 LAMC3Q9Y6N6 1575 aa5.44□□□□□ -1.54
BRCA2-206ENST00000544455 CASKIN1Q8WXD9 1431 aa5.44□□□□□ -1.54
BRCA2-206ENST00000544455 MAPKBP1O60336 1514 aa5.44□□□□□ -1.54
BRCA2-206ENST00000544455 FGD6Q6ZV73 1430 aa5.43□□□□□ -1.54
BRCA2-206ENST00000544455 CDK13Q14004 1512 aaKnown RBP5.43□□□□□ -1.54
BRCA2-206ENST00000544455 SNAPC4Q5SXM2 1469 aa5.43□□□□□ -1.54
BRCA2-206ENST00000544455 FMN1Q68DA7 1419 aa5.42□□□□□ -1.54
BRCA2-206ENST00000544455 NCOA2Q15596 1464 aa5.42□□□□□ -1.54
BRCA2-206ENST00000544455 CHMP7Q8WUX9 453 aaPredicted RBP5.42□□□□□ -1.54
BRCA2-206ENST00000544455 KIF21AQ7Z4S6 1674 aa5.42□□□□□ -1.54
BRCA2-206ENST00000544455 FYCO1Q9BQS8 1478 aa5.42□□□□□ -1.54
BRCA2-206ENST00000544455 ERCC6Q03468 1493 aa5.42□□□□□ -1.54
BRCA2-206ENST00000544455 MAGI3Q5TCQ9 1506 aa5.41□□□□□ -1.54
BRCA2-206ENST00000544455 CLSPNQ9HAW4 1339 aa5.41□□□□□ -1.54
BRCA2-206ENST00000544455 MRC2Q9UBG0 1479 aa5.41□□□□□ -1.54
BRCA2-206ENST00000544455 ABCA5Q8WWZ7 1642 aa5.41□□□□□ -1.54
BRCA2-206ENST00000544455 PPP1R15AO75807 674 aaPredicted RBP5.39□□□□□ -1.55
BRCA2-206ENST00000544455 BCANQ96GW7 911 aa5.39□□□□□ -1.55
BRCA2-206ENST00000544455 GRIN2BQ13224 1484 aa5.39□□□□□ -1.55
BRCA2-206ENST00000544455 TONSLQ96HA7 1378 aa5.39□□□□□ -1.55
BRCA2-206ENST00000544455 WDR97A6NE52 1622 aa5.39□□□□□ -1.55
BRCA2-206ENST00000544455 PRDM2Q13029 1718 aa5.39□□□□□ -1.55
BRCA2-206ENST00000544455 MYOM3Q5VTT5 1437 aa5.39□□□□□ -1.55
BRCA2-206ENST00000544455 TARBP1Q13395 1621 aaKnown RBP5.39□□□□□ -1.55
BRCA2-206ENST00000544455 ZNF326Q5BKZ1 582 aaKnown RBP5.38□□□□□ -1.55
BRCA2-206ENST00000544455 EFCAB5A4FU69 1503 aa5.38□□□□□ -1.55
BRCA2-206ENST00000544455 CCDC18Q5T9S5 1454 aa5.38□□□□□ -1.55
BRCA2-206ENST00000544455 SENP3-EIF4A1A0A087X0R7 540 aa5.38□□□□□ -1.55
BRCA2-206ENST00000544455 CUL7Q14999 1698 aa5.38□□□□□ -1.55
BRCA2-206ENST00000544455 PRG4Q92954 1404 aaPredicted RBP5.38□□□□□ -1.55
BRCA2-206ENST00000544455 MAP3K1Q13233 1512 aa5.37□□□□□ -1.55
BRCA2-206ENST00000544455 POLR3GLQ9BT43 218 aa5.37□□□□□ -1.55
BRCA2-206ENST00000544455 CFAP43Q8NDM7 1665 aa5.37□□□□□ -1.55
BRCA2-206ENST00000544455 PLB1Q6P1J6 1458 aa5.36□□□□□ -1.55
BRCA2-206ENST00000544455 NAIPQ13075 1403 aa5.36□□□□□ -1.55
BRCA2-206ENST00000544455 EPRSP07814 1512 aaKnown RBP5.36□□□□□ -1.55
BRCA2-206ENST00000544455 THOC2Q8NI27 1593 aaKnown RBP5.35□□□□□ -1.55
BRCA2-206ENST00000544455 CFDP1Q9UEE9 299 aaPredicted RBP5.35□□□□□ -1.55
BRCA2-206ENST00000544455 MPHOSPH9Q99550 1183 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 IQGAP2Q13576 1575 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 HSPA5P11021 654 aaKnown RBP5.35□□□□□ -1.55
BRCA2-206ENST00000544455 JPH4Q96JJ6 628 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 ADAMTS12P58397 1594 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 SAMD9Q5K651 1589 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 CTTNBP2Q8WZ74 1663 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 SLC4A1APQ9BWU0 796 aaKnown RBP5.35□□□□□ -1.55
BRCA2-206ENST00000544455 IFT140Q96RY7 1462 aa5.35□□□□□ -1.55
BRCA2-206ENST00000544455 DISP1Q96F81 1524 aa5.34□□□□□ -1.55
BRCA2-206ENST00000544455 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
BRCA2-206ENST00000544455 HNRNPMP52272 730 aaKnown RBP eCLIP5.34□□□□□ -1.55
BRCA2-206ENST00000544455 KDM6BO15054 1643 aa5.34□□□□□ -1.55
BRCA2-206ENST00000544455 PELP1Q8IZL8 1130 aaKnown RBP5.34□□□□□ -1.55
BRCA2-206ENST00000544455 L3MBTL2Q969R5 705 aa5.34□□□□□ -1.55
BRCA2-206ENST00000544455 UACAQ9BZF9 1416 aa5.34□□□□□ -1.55
BRCA2-206ENST00000544455 GRIN2AQ12879 1464 aa5.33□□□□□ -1.56
BRCA2-206ENST00000544455 NUP153P49790 1475 aaKnown RBP5.33□□□□□ -1.56
BRCA2-206ENST00000544455 EHBP1L1Q8N3D4 1523 aa5.33□□□□□ -1.56
BRCA2-206ENST00000544455 UGGT2Q9NYU1 1516 aa5.33□□□□□ -1.56
BRCA2-206ENST00000544455 SUPT16HQ9Y5B9 1047 aaKnown RBP5.33□□□□□ -1.56
BRCA2-206ENST00000544455 DENND4BO75064 1496 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-206ENST00000544455 PTPN23Q9H3S7 1636 aa5.33□□□□□ -1.56
BRCA2-206ENST00000544455 C11orf95C9JLR9 678 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-206ENST00000544455 CCDC184Q52MB2 194 aa5.33□□□□□ -1.56
BRCA2-206ENST00000544455 LRRIQ1Q96JM4 1722 aa5.33□□□□□ -1.56
BRCA2-206ENST00000544455 NBPF8Q3BBV2 869 aa5.32□□□□□ -1.56
BRCA2-206ENST00000544455 KIAA0586Q9BVV6 1533 aa5.32□□□□□ -1.56
BRCA2-206ENST00000544455 EIF4G3O43432 1585 aaKnown RBP5.32□□□□□ -1.56
BRCA2-206ENST00000544455 ANP32CO43423 234 aa5.32□□□□□ -1.56
BRCA2-206ENST00000544455 WDR62O43379 1518 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms