RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 KIF21BO75037 1637 aa10.33□□□□□ -0.76
LTBR-212ENST00000543542 KIAA0586Q9BVV6 1533 aa10.33□□□□□ -0.76
LTBR-212ENST00000543542 UBTFP17480 764 aaKnown RBP10.32□□□□□ -0.76
LTBR-212ENST00000543542 RIMBP3CA6NJZ7 1639 aa10.32□□□□□ -0.76
LTBR-212ENST00000543542 RIMBP3BA6NNM3 1639 aa10.32□□□□□ -0.76
LTBR-212ENST00000543542 RIMBP3Q9UFD9 1639 aa10.32□□□□□ -0.76
LTBR-212ENST00000543542 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
LTBR-212ENST00000543542 JPH4Q96JJ6 628 aa10.31□□□□□ -0.76
LTBR-212ENST00000543542 ARHGEF11O15085 1522 aa10.31□□□□□ -0.76
LTBR-212ENST00000543542 GOLGA3Q08378 1498 aa10.3□□□□□ -0.76
LTBR-212ENST00000543542 RANGAP1P46060 587 aaPredicted RBP10.3□□□□□ -0.76
LTBR-212ENST00000543542 SHROOM2Q13796 1616 aa10.29□□□□□ -0.76
LTBR-212ENST00000543542 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
LTBR-212ENST00000543542 TTBK1Q5TCY1 1321 aaPredicted RBP10.27□□□□□ -0.77
LTBR-212ENST00000543542 CARMIL2Q6F5E8 1435 aa10.26□□□□□ -0.77
LTBR-212ENST00000543542 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
LTBR-212ENST00000543542 CYB5RLQ6IPT4 315 aa10.24□□□□□ -0.77
LTBR-212ENST00000543542 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
LTBR-212ENST00000543542 ARAP1Q96P48 1450 aa10.22□□□□□ -0.77
LTBR-212ENST00000543542 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
LTBR-212ENST00000543542 KIAA0556O60303 1618 aa10.21□□□□□ -0.78
LTBR-212ENST00000543542 DISP1Q96F81 1524 aa10.19□□□□□ -0.78
LTBR-212ENST00000543542 TNIKQ9UKE5 1360 aa10.19□□□□□ -0.78
LTBR-212ENST00000543542 LOC105371045A0A1W2PR82 267 aa10.19□□□□□ -0.78
LTBR-212ENST00000543542 PTPRGP23470 1445 aa10.18□□□□□ -0.78
LTBR-212ENST00000543542 SAMD9Q5K651 1589 aa10.16□□□□□ -0.78
LTBR-212ENST00000543542 EFCAB5A4FU69 1503 aa10.16□□□□□ -0.78
LTBR-212ENST00000543542 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
LTBR-212ENST00000543542 FHOD3Q2V2M9 1422 aa10.14□□□□□ -0.79
LTBR-212ENST00000543542 CLIP1P30622 1438 aa10.12□□□□□ -0.79
LTBR-212ENST00000543542 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
LTBR-212ENST00000543542 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
LTBR-212ENST00000543542 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
LTBR-212ENST00000543542 UACAQ9BZF9 1416 aa10.1□□□□□ -0.79
LTBR-212ENST00000543542 ADCY10Q96PN6 1610 aa10.1□□□□□ -0.79
LTBR-212ENST00000543542 PLB1Q6P1J6 1458 aa10.09□□□□□ -0.79
LTBR-212ENST00000543542 ABCC2Q92887 1545 aa10.08□□□□□ -0.8
LTBR-212ENST00000543542 RAPGEF6Q8TEU7 1601 aa10.08□□□□□ -0.8
LTBR-212ENST00000543542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.08□□□□□ -0.8
LTBR-212ENST00000543542 HNRNPUL2Q1KMD3 747 aaKnown RBP10.08□□□□□ -0.8
LTBR-212ENST00000543542 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
LTBR-212ENST00000543542 ARID3CA6NKF2 412 aa10.07□□□□□ -0.8
LTBR-212ENST00000543542 ABCA8O94911 1581 aa10.06□□□□□ -0.8
LTBR-212ENST00000543542 UHRF1BP1LA0JNW5 1464 aa10.06□□□□□ -0.8
LTBR-212ENST00000543542 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
LTBR-212ENST00000543542 ZCCHC11Q5TAX3 1644 aaKnown RBP10.04□□□□□ -0.8
LTBR-212ENST00000543542 HECW1Q76N89 1606 aa10.04□□□□□ -0.8
LTBR-212ENST00000543542 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.81
LTBR-212ENST00000543542 PCF11O94913 1555 aaKnown RBP10.01□□□□□ -0.81
LTBR-212ENST00000543542 NUP153P49790 1475 aaKnown RBP10□□□□□ -0.81
LTBR-212ENST00000543542 MAPKBP1O60336 1514 aa10□□□□□ -0.81
LTBR-212ENST00000543542 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
LTBR-212ENST00000543542 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
LTBR-212ENST00000543542 ATP10BO94823 1461 aa9.98□□□□□ -0.81
LTBR-212ENST00000543542 FYCO1Q9BQS8 1478 aa9.98□□□□□ -0.81
LTBR-212ENST00000543542 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
LTBR-212ENST00000543542 CDK13Q14004 1512 aaKnown RBP9.97□□□□□ -0.81
LTBR-212ENST00000543542 PLEKHD1A6NEE1 506 aa9.97□□□□□ -0.81
LTBR-212ENST00000543542 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
LTBR-212ENST00000543542 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
LTBR-212ENST00000543542 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.82
LTBR-212ENST00000543542 VPS8Q8N3P4 1428 aa9.96□□□□□ -0.82
LTBR-212ENST00000543542 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
LTBR-212ENST00000543542 WDR7Q9Y4E6 1490 aa9.96□□□□□ -0.82
LTBR-212ENST00000543542 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
LTBR-212ENST00000543542 APLP2Q06481 763 aa9.95□□□□□ -0.82
LTBR-212ENST00000543542 KIF13AQ9H1H9 1805 aa9.95□□□□□ -0.82
LTBR-212ENST00000543542 DIP2BQ9P265 1576 aa9.94□□□□□ -0.82
LTBR-212ENST00000543542 ABCC10Q5T3U5 1492 aa9.93□□□□□ -0.82
LTBR-212ENST00000543542 TSPOAP1O95153 1857 aa9.93□□□□□ -0.82
LTBR-212ENST00000543542 CFAP43Q8NDM7 1665 aa9.9□□□□□ -0.83
LTBR-212ENST00000543542 KIF14Q15058 1648 aa9.89□□□□□ -0.83
LTBR-212ENST00000543542 MTUS2Q5JR59 1369 aa9.89□□□□□ -0.83
LTBR-212ENST00000543542 GLI2P10070 1586 aa9.89□□□□□ -0.83
LTBR-212ENST00000543542 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
LTBR-212ENST00000543542 TROQ12816 1431 aaPredicted RBP9.88□□□□□ -0.83
LTBR-212ENST00000543542 MAP3K4Q9Y6R4 1608 aa9.87□□□□□ -0.83
LTBR-212ENST00000543542 CD109Q6YHK3 1445 aa9.87□□□□□ -0.83
LTBR-212ENST00000543542 ABCA9Q8IUA7 1624 aa9.86□□□□□ -0.83
LTBR-212ENST00000543542 EHBP1L1Q8N3D4 1523 aa9.86□□□□□ -0.83
LTBR-212ENST00000543542 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
LTBR-212ENST00000543542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.85□□□□□ -0.83
LTBR-212ENST00000543542 TEX14Q8IWB6 1497 aa9.85□□□□□ -0.83
LTBR-212ENST00000543542 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
LTBR-212ENST00000543542 TTC37Q6PGP7 1564 aa9.84□□□□□ -0.83
LTBR-212ENST00000543542 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
LTBR-212ENST00000543542 MAP3K1Q13233 1512 aa9.83□□□□□ -0.84
LTBR-212ENST00000543542 LRRC9Q6ZRR7 1453 aa9.82□□□□□ -0.84
LTBR-212ENST00000543542 PPRC1Q5VV67 1664 aaKnown RBP9.82□□□□□ -0.84
LTBR-212ENST00000543542 CCNB3Q8WWL7 1395 aa9.81□□□□□ -0.84
LTBR-212ENST00000543542 KANK4Q5T7N3 995 aaPredicted RBP9.81□□□□□ -0.84
LTBR-212ENST00000543542 ARHGAP5Q13017 1502 aa9.81□□□□□ -0.84
LTBR-212ENST00000543542 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
LTBR-212ENST00000543542 PPARGC1BQ86YN6 1023 aaKnown RBP9.8□□□□□ -0.84
LTBR-212ENST00000543542 ITSN2Q9NZM3 1697 aa9.8□□□□□ -0.84
LTBR-212ENST00000543542 CDC42BPAQ5VT25 1732 aa9.79□□□□□ -0.84
LTBR-212ENST00000543542 KDM6BO15054 1643 aa9.79□□□□□ -0.84
LTBR-212ENST00000543542 EFCAB2Q5VUJ9 269 aa9.79□□□□□ -0.84
LTBR-212ENST00000543542 ZNF777Q9ULD5 760 aaPredicted RBP9.79□□□□□ -0.84
LTBR-212ENST00000543542 PLCH2O75038 1416 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms