RNA–Protein interactions for RNA: ENST00000543491.2

PCDH7-206, Transcript of protocadherin 7, humanhuman

APPRIS ALT2 BASIC

Gene PCDH7, Length 4,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-206ENST00000543491 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
PCDH7-206ENST00000543491 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
PCDH7-206ENST00000543491 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
PCDH7-206ENST00000543491 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.38
PCDH7-206ENST00000543491 FAM9BQ8IZU0 186 aa23.68■■□□□ 1.38
PCDH7-206ENST00000543491 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
PCDH7-206ENST00000543491 IRX6P78412 446 aaPredicted RBP23.64■■□□□ 1.37
PCDH7-206ENST00000543491 EIF5BO60841 1220 aaKnown RBP23.64■■□□□ 1.37
PCDH7-206ENST00000543491 VPS8Q8N3P4 1428 aa23.64■■□□□ 1.37
PCDH7-206ENST00000543491 TSHZ2Q9NRE2 1034 aa23.61■■□□□ 1.37
PCDH7-206ENST00000543491 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
PCDH7-206ENST00000543491 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
PCDH7-206ENST00000543491 MRS2Q9HD23 443 aa23.57■■□□□ 1.36
PCDH7-206ENST00000543491 RBM19Q9Y4C8 960 aaKnown RBP23.56■■□□□ 1.36
PCDH7-206ENST00000543491 SIN3AQ96ST3 1273 aa23.56■■□□□ 1.36
PCDH7-206ENST00000543491 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
PCDH7-206ENST00000543491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
PCDH7-206ENST00000543491 CCNB3Q8WWL7 1395 aa23.51■■□□□ 1.35
PCDH7-206ENST00000543491 PPP4R2Q9NY27 417 aa23.47■■□□□ 1.35
PCDH7-206ENST00000543491 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
PCDH7-206ENST00000543491 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
PCDH7-206ENST00000543491 KCNH8Q96L42 1107 aa23.43■■□□□ 1.34
PCDH7-206ENST00000543491 KDM2AQ9Y2K7 1162 aa23.42■■□□□ 1.34
PCDH7-206ENST00000543491 CCER2I3L3R5 266 aa23.42■■□□□ 1.34
PCDH7-206ENST00000543491 EIF4G2P78344 907 aaKnown RBP eCLIP23.42■■□□□ 1.34
PCDH7-206ENST00000543491 TMC1Q8TDI8 760 aa23.4■■□□□ 1.34
PCDH7-206ENST00000543491 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
PCDH7-206ENST00000543491 PLEKHD1A6NEE1 506 aa23.39■■□□□ 1.34
PCDH7-206ENST00000543491 GLIPR1L2Q4G1C9 344 aa23.39■■□□□ 1.34
PCDH7-206ENST00000543491 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.33
PCDH7-206ENST00000543491 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
PCDH7-206ENST00000543491 CFDP1Q9UEE9 299 aaPredicted RBP23.37■■□□□ 1.33
PCDH7-206ENST00000543491 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
PCDH7-206ENST00000543491 NOP58Q9Y2X3 529 aaKnown RBP23.37■■□□□ 1.33
PCDH7-206ENST00000543491 CANXP27824 592 aaKnown RBP23.32■■□□□ 1.32
PCDH7-206ENST00000543491 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
PCDH7-206ENST00000543491 DEKP35659 375 aaKnown RBP23.3■■□□□ 1.32
PCDH7-206ENST00000543491 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
PCDH7-206ENST00000543491 ERICH6BQ5W0A0 696 aa23.29■■□□□ 1.32
PCDH7-206ENST00000543491 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
PCDH7-206ENST00000543491 DDRGK1Q96HY6 314 aa23.27■■□□□ 1.32
PCDH7-206ENST00000543491 PPM1GO15355 546 aaPredicted RBP23.26■■□□□ 1.31
PCDH7-206ENST00000543491 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCDH7-206ENST00000543491 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
PCDH7-206ENST00000543491 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
PCDH7-206ENST00000543491 UPF2Q9HAU5 1272 aaKnown RBP23.22■■□□□ 1.31
PCDH7-206ENST00000543491 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
PCDH7-206ENST00000543491 RGL3Q3MIN7 710 aa23.21■■□□□ 1.31
PCDH7-206ENST00000543491 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
PCDH7-206ENST00000543491 IGF1RP08069 1367 aa23.19■■□□□ 1.3
PCDH7-206ENST00000543491 RAB3GAP2Q9H2M9 1393 aa23.19■■□□□ 1.3
PCDH7-206ENST00000543491 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
PCDH7-206ENST00000543491 SENP3-EIF4A1A0A087X0R7 540 aa23.16■■□□□ 1.3
PCDH7-206ENST00000543491 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
PCDH7-206ENST00000543491 FOXD1Q16676 465 aa23.15■■□□□ 1.3
PCDH7-206ENST00000543491 NEFMP07197 916 aa23.15■■□□□ 1.3
PCDH7-206ENST00000543491 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
PCDH7-206ENST00000543491 RAD54L2Q9Y4B4 1467 aa23.14■■□□□ 1.29
PCDH7-206ENST00000543491 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
PCDH7-206ENST00000543491 ARHGAP35Q9NRY4 1499 aa23.13■■□□□ 1.29
PCDH7-206ENST00000543491 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
PCDH7-206ENST00000543491 ANP32BQ92688 251 aaKnown RBP23.11■■□□□ 1.29
PCDH7-206ENST00000543491 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
PCDH7-206ENST00000543491 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
PCDH7-206ENST00000543491 RTN4Q9NQC3 1192 aaKnown RBP23.04■■□□□ 1.28
PCDH7-206ENST00000543491 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
PCDH7-206ENST00000543491 LAS1LQ9Y4W2 734 aaKnown RBP23.03■■□□□ 1.28
PCDH7-206ENST00000543491 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
PCDH7-206ENST00000543491 CFTRP13569 1480 aa22.99■■□□□ 1.27
PCDH7-206ENST00000543491 FANCIQ9NVI1 1328 aa22.98■■□□□ 1.27
PCDH7-206ENST00000543491 NESP48681 1621 aa22.97■■□□□ 1.27
PCDH7-206ENST00000543491 BECN1Q14457 450 aa22.97■■□□□ 1.27
PCDH7-206ENST00000543491 KIF21BO75037 1637 aa22.97■■□□□ 1.27
PCDH7-206ENST00000543491 HSP90AA1P07900 732 aaKnown RBP22.97■■□□□ 1.27
PCDH7-206ENST00000543491 WDR43Q15061 677 aaKnown RBP eCLIP22.95■■□□□ 1.26
PCDH7-206ENST00000543491 PPP1R15AO75807 674 aaPredicted RBP22.95■■□□□ 1.26
PCDH7-206ENST00000543491 STAG3Q9UJ98 1225 aa22.94■■□□□ 1.26
PCDH7-206ENST00000543491 CARD11Q9BXL7 1154 aa22.94■■□□□ 1.26
PCDH7-206ENST00000543491 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
PCDH7-206ENST00000543491 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
PCDH7-206ENST00000543491 ARXQ96QS3 562 aa22.91■■□□□ 1.26
PCDH7-206ENST00000543491 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
PCDH7-206ENST00000543491 MPHOSPH9Q99550 1183 aa22.9■■□□□ 1.26
PCDH7-206ENST00000543491 PKD2Q13563 968 aa22.88■■□□□ 1.25
PCDH7-206ENST00000543491 ESF1Q9H501 851 aaKnown RBP22.87■■□□□ 1.25
PCDH7-206ENST00000543491 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
PCDH7-206ENST00000543491 CUX1P39880 1505 aa22.87■■□□□ 1.25
PCDH7-206ENST00000543491 IPO9Q96P70 1041 aaKnown RBP22.86■■□□□ 1.25
PCDH7-206ENST00000543491 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
PCDH7-206ENST00000543491 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
PCDH7-206ENST00000543491 HSPA5P11021 654 aaKnown RBP22.84■■□□□ 1.25
PCDH7-206ENST00000543491 AQRO60306 1485 aaKnown RBP eCLIP22.83■■□□□ 1.25
PCDH7-206ENST00000543491 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
PCDH7-206ENST00000543491 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
PCDH7-206ENST00000543491 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
PCDH7-206ENST00000543491 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
PCDH7-206ENST00000543491 TCERG1O14776 1098 aaKnown RBP22.78■■□□□ 1.24
PCDH7-206ENST00000543491 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
PCDH7-206ENST00000543491 L3MBTL2Q969R5 705 aa22.78■■□□□ 1.24
PCDH7-206ENST00000543491 TRIM44Q96DX7 344 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms