RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
SMCR5-201ENST00000543475 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
SMCR5-201ENST00000543475 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
SMCR5-201ENST00000543475 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
SMCR5-201ENST00000543475 ANP32CO43423 234 aa17.68■□□□□ 0.42
SMCR5-201ENST00000543475 CUX1P39880 1505 aa17.66■□□□□ 0.42
SMCR5-201ENST00000543475 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
SMCR5-201ENST00000543475 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
SMCR5-201ENST00000543475 TIMELESSQ9UNS1 1208 aa17.65■□□□□ 0.42
SMCR5-201ENST00000543475 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
SMCR5-201ENST00000543475 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
SMCR5-201ENST00000543475 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
SMCR5-201ENST00000543475 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
SMCR5-201ENST00000543475 MSH5O43196 834 aa17.56■□□□□ 0.4
SMCR5-201ENST00000543475 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
SMCR5-201ENST00000543475 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
SMCR5-201ENST00000543475 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
SMCR5-201ENST00000543475 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
SMCR5-201ENST00000543475 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
SMCR5-201ENST00000543475 IGF1RP08069 1367 aa17.48■□□□□ 0.39
SMCR5-201ENST00000543475 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
SMCR5-201ENST00000543475 CFAP43Q8NDM7 1665 aa17.47■□□□□ 0.39
SMCR5-201ENST00000543475 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMCR5-201ENST00000543475 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
SMCR5-201ENST00000543475 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
SMCR5-201ENST00000543475 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
SMCR5-201ENST00000543475 CFTRP13569 1480 aa17.44■□□□□ 0.38
SMCR5-201ENST00000543475 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
SMCR5-201ENST00000543475 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
SMCR5-201ENST00000543475 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
SMCR5-201ENST00000543475 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
SMCR5-201ENST00000543475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMCR5-201ENST00000543475 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
SMCR5-201ENST00000543475 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
SMCR5-201ENST00000543475 PPP4R2Q9NY27 417 aa17.34■□□□□ 0.37
SMCR5-201ENST00000543475 UACAQ9BZF9 1416 aa17.33■□□□□ 0.37
SMCR5-201ENST00000543475 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.36
SMCR5-201ENST00000543475 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
SMCR5-201ENST00000543475 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
SMCR5-201ENST00000543475 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
SMCR5-201ENST00000543475 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
SMCR5-201ENST00000543475 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
SMCR5-201ENST00000543475 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
SMCR5-201ENST00000543475 CASKIN1Q8WXD9 1431 aa17.29■□□□□ 0.36
SMCR5-201ENST00000543475 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
SMCR5-201ENST00000543475 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
SMCR5-201ENST00000543475 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMCR5-201ENST00000543475 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
SMCR5-201ENST00000543475 PTPRKQ15262 1439 aa17.25■□□□□ 0.35
SMCR5-201ENST00000543475 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
SMCR5-201ENST00000543475 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
SMCR5-201ENST00000543475 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
SMCR5-201ENST00000543475 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
SMCR5-201ENST00000543475 NAIPQ13075 1403 aa17.22■□□□□ 0.35
SMCR5-201ENST00000543475 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
SMCR5-201ENST00000543475 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
SMCR5-201ENST00000543475 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMCR5-201ENST00000543475 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
SMCR5-201ENST00000543475 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
SMCR5-201ENST00000543475 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
SMCR5-201ENST00000543475 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
SMCR5-201ENST00000543475 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
SMCR5-201ENST00000543475 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
SMCR5-201ENST00000543475 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
SMCR5-201ENST00000543475 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
SMCR5-201ENST00000543475 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
SMCR5-201ENST00000543475 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
SMCR5-201ENST00000543475 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
SMCR5-201ENST00000543475 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
SMCR5-201ENST00000543475 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
SMCR5-201ENST00000543475 NBR1Q14596 966 aa17.11■□□□□ 0.33
SMCR5-201ENST00000543475 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
SMCR5-201ENST00000543475 SUPT6HQ7KZ85 1726 aaKnown RBP17.09■□□□□ 0.33
SMCR5-201ENST00000543475 C11orf95C9JLR9 678 aaPredicted RBP17.09■□□□□ 0.33
SMCR5-201ENST00000543475 NCOA1Q15788 1441 aa17.08■□□□□ 0.33
SMCR5-201ENST00000543475 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
SMCR5-201ENST00000543475 CUL7Q14999 1698 aa17.08■□□□□ 0.32
SMCR5-201ENST00000543475 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.32
SMCR5-201ENST00000543475 HECW1Q76N89 1606 aa17.08■□□□□ 0.32
SMCR5-201ENST00000543475 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
SMCR5-201ENST00000543475 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
SMCR5-201ENST00000543475 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
SMCR5-201ENST00000543475 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
SMCR5-201ENST00000543475 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
SMCR5-201ENST00000543475 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
SMCR5-201ENST00000543475 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
SMCR5-201ENST00000543475 EHBP1L1Q8N3D4 1523 aa17.04■□□□□ 0.32
SMCR5-201ENST00000543475 ANP32AP39687 249 aaKnown RBP17.03■□□□□ 0.32
SMCR5-201ENST00000543475 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
SMCR5-201ENST00000543475 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
SMCR5-201ENST00000543475 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
SMCR5-201ENST00000543475 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
SMCR5-201ENST00000543475 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
SMCR5-201ENST00000543475 AKNAQ7Z591 1439 aa17■□□□□ 0.31
SMCR5-201ENST00000543475 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
SMCR5-201ENST00000543475 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
SMCR5-201ENST00000543475 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
SMCR5-201ENST00000543475 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
SMCR5-201ENST00000543475 FOXD1Q16676 465 aa16.99■□□□□ 0.31
SMCR5-201ENST00000543475 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms