RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
TRIM65-204ENST00000543309 GOLGA3Q08378 1498 aa26.22■■□□□ 1.79
TRIM65-204ENST00000543309 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
TRIM65-204ENST00000543309 GRIN2AQ12879 1464 aa26.14■■□□□ 1.78
TRIM65-204ENST00000543309 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
TRIM65-204ENST00000543309 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
TRIM65-204ENST00000543309 CTTNBP2Q8WZ74 1663 aa26.02■■□□□ 1.76
TRIM65-204ENST00000543309 TNIKQ9UKE5 1360 aa26.01■■□□□ 1.75
TRIM65-204ENST00000543309 NUP160Q12769 1436 aa26■■□□□ 1.75
TRIM65-204ENST00000543309 UBTFP17480 764 aaKnown RBP25.99■■□□□ 1.75
TRIM65-204ENST00000543309 CEP170Q5SW79 1584 aa25.97■■□□□ 1.75
TRIM65-204ENST00000543309 EHMT2Q96KQ7 1210 aa25.96■■□□□ 1.75
TRIM65-204ENST00000543309 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
TRIM65-204ENST00000543309 IQGAP2Q13576 1575 aa25.9■■□□□ 1.74
TRIM65-204ENST00000543309 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
TRIM65-204ENST00000543309 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
TRIM65-204ENST00000543309 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
TRIM65-204ENST00000543309 UGGT2Q9NYU1 1516 aa25.78■■□□□ 1.72
TRIM65-204ENST00000543309 EFCAB5A4FU69 1503 aa25.75■■□□□ 1.71
TRIM65-204ENST00000543309 CLIP1P30622 1438 aa25.74■■□□□ 1.71
TRIM65-204ENST00000543309 SAMD9Q5K651 1589 aa25.72■■□□□ 1.71
TRIM65-204ENST00000543309 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
TRIM65-204ENST00000543309 ARHGAP35Q9NRY4 1499 aa25.66■■□□□ 1.7
TRIM65-204ENST00000543309 DISP1Q96F81 1524 aa25.63■■□□□ 1.69
TRIM65-204ENST00000543309 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
TRIM65-204ENST00000543309 CARMIL2Q6F5E8 1435 aa25.62■■□□□ 1.69
TRIM65-204ENST00000543309 RANGAP1P46060 587 aaPredicted RBP25.6■■□□□ 1.69
TRIM65-204ENST00000543309 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
TRIM65-204ENST00000543309 KIF13AQ9H1H9 1805 aa25.52■■□□□ 1.68
TRIM65-204ENST00000543309 FHOD3Q2V2M9 1422 aa25.51■■□□□ 1.67
TRIM65-204ENST00000543309 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
TRIM65-204ENST00000543309 VPS8Q8N3P4 1428 aa25.46■■□□□ 1.67
TRIM65-204ENST00000543309 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
TRIM65-204ENST00000543309 PTPRGP23470 1445 aa25.37■■□□□ 1.65
TRIM65-204ENST00000543309 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
TRIM65-204ENST00000543309 ADCY10Q96PN6 1610 aa25.37■■□□□ 1.65
TRIM65-204ENST00000543309 AEBP2Q6ZN18 517 aaPredicted RBP25.37■■□□□ 1.65
TRIM65-204ENST00000543309 CASKIN1Q8WXD9 1431 aa25.35■■□□□ 1.65
TRIM65-204ENST00000543309 FYCO1Q9BQS8 1478 aa25.34■■□□□ 1.65
TRIM65-204ENST00000543309 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
TRIM65-204ENST00000543309 ABCC10Q5T3U5 1492 aa25.33■■□□□ 1.65
TRIM65-204ENST00000543309 DIP2BQ9P265 1576 aa25.32■■□□□ 1.64
TRIM65-204ENST00000543309 ABCA8O94911 1581 aa25.31■■□□□ 1.64
TRIM65-204ENST00000543309 RAPGEF6Q8TEU7 1601 aa25.31■■□□□ 1.64
TRIM65-204ENST00000543309 HECW1Q76N89 1606 aa25.29■■□□□ 1.64
TRIM65-204ENST00000543309 PLB1Q6P1J6 1458 aa25.26■■□□□ 1.63
TRIM65-204ENST00000543309 UACAQ9BZF9 1416 aa25.25■■□□□ 1.63
TRIM65-204ENST00000543309 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
TRIM65-204ENST00000543309 NPM1P06748 294 aaKnown RBP eCLIP25.23■■□□□ 1.63
TRIM65-204ENST00000543309 ABCC2Q92887 1545 aa25.22■■□□□ 1.63
TRIM65-204ENST00000543309 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
TRIM65-204ENST00000543309 MAP3K1Q13233 1512 aa25.21■■□□□ 1.63
TRIM65-204ENST00000543309 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
TRIM65-204ENST00000543309 FAM69CQ0P6D2 419 aa25.2■■□□□ 1.62
TRIM65-204ENST00000543309 CCDC18Q5T9S5 1454 aa25.19■■□□□ 1.62
TRIM65-204ENST00000543309 LRRIQ1Q96JM4 1722 aa25.17■■□□□ 1.62
TRIM65-204ENST00000543309 CFAP43Q8NDM7 1665 aa25.17■■□□□ 1.62
TRIM65-204ENST00000543309 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
TRIM65-204ENST00000543309 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
TRIM65-204ENST00000543309 KDM6BO15054 1643 aa25.12■■□□□ 1.61
TRIM65-204ENST00000543309 APLP2Q06481 763 aa25.11■■□□□ 1.61
TRIM65-204ENST00000543309 ATP1B4Q9UN42 357 aaPredicted RBP25.1■■□□□ 1.61
TRIM65-204ENST00000543309 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
TRIM65-204ENST00000543309 TSPOAP1O95153 1857 aa25.09■■□□□ 1.61
TRIM65-204ENST00000543309 ATP10BO94823 1461 aa25.07■■□□□ 1.6
TRIM65-204ENST00000543309 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
TRIM65-204ENST00000543309 ZCCHC11Q5TAX3 1644 aaKnown RBP25.04■■□□□ 1.6
TRIM65-204ENST00000543309 LRRC9Q6ZRR7 1453 aa25■■□□□ 1.59
TRIM65-204ENST00000543309 GLI2P10070 1586 aa24.98■■□□□ 1.59
TRIM65-204ENST00000543309 ASXL2Q76L83 1435 aa24.98■■□□□ 1.59
TRIM65-204ENST00000543309 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
TRIM65-204ENST00000543309 PPRC1Q5VV67 1664 aaKnown RBP24.97■■□□□ 1.59
TRIM65-204ENST00000543309 EHBP1L1Q8N3D4 1523 aa24.97■■□□□ 1.59
TRIM65-204ENST00000543309 ARID3CA6NKF2 412 aa24.94■■□□□ 1.58
TRIM65-204ENST00000543309 MAGI3Q5TCQ9 1506 aa24.94■■□□□ 1.58
TRIM65-204ENST00000543309 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
TRIM65-204ENST00000543309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
TRIM65-204ENST00000543309 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
TRIM65-204ENST00000543309 KANK4Q5T7N3 995 aaPredicted RBP24.92■■□□□ 1.58
TRIM65-204ENST00000543309 TROQ12816 1431 aaPredicted RBP24.92■■□□□ 1.58
TRIM65-204ENST00000543309 PLEKHD1A6NEE1 506 aa24.89■■□□□ 1.58
TRIM65-204ENST00000543309 SUPT6HQ7KZ85 1726 aaKnown RBP24.87■■□□□ 1.57
TRIM65-204ENST00000543309 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
TRIM65-204ENST00000543309 WDR7Q9Y4E6 1490 aa24.85■■□□□ 1.57
TRIM65-204ENST00000543309 KIF14Q15058 1648 aa24.83■■□□□ 1.57
TRIM65-204ENST00000543309 KDM4FA0A1W2PPD8 638 aa24.8■■□□□ 1.56
TRIM65-204ENST00000543309 NCOA2Q15596 1464 aa24.79■■□□□ 1.56
TRIM65-204ENST00000543309 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
TRIM65-204ENST00000543309 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
TRIM65-204ENST00000543309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.551e-6■■■□□ 18.7
TRIM65-204ENST00000543309 COL17A1Q9UMD9 1497 aaPredicted RBP24.71■■□□□ 1.55
TRIM65-204ENST00000543309 ABCA9Q8IUA7 1624 aa24.7■■□□□ 1.54
TRIM65-204ENST00000543309 ITSN2Q9NZM3 1697 aa24.69■■□□□ 1.54
TRIM65-204ENST00000543309 PHLDB1Q86UU1 1377 aa24.68■■□□□ 1.54
TRIM65-204ENST00000543309 TTC37Q6PGP7 1564 aa24.68■■□□□ 1.54
TRIM65-204ENST00000543309 ADGRL1O94910 1474 aa24.68■■□□□ 1.54
TRIM65-204ENST00000543309 MYOM3Q5VTT5 1437 aa24.68■■□□□ 1.54
TRIM65-204ENST00000543309 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
TRIM65-204ENST00000543309 CDC42BPAQ5VT25 1732 aa24.65■■□□□ 1.54
TRIM65-204ENST00000543309 KCNH8Q96L42 1107 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms