RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 CTTNBP2Q8WZ74 1663 aa34.1■■■■□ 3.05
OTUB1-211ENST00000543004 KIAA0586Q9BVV6 1533 aa34.05■■■■□ 3.04
OTUB1-211ENST00000543004 LOC105371045A0A1W2PR82 267 aa34.03■■■■□ 3.04
OTUB1-211ENST00000543004 UBTFP17480 764 aaKnown RBP34.02■■■■□ 3.04
OTUB1-211ENST00000543004 IQGAP2Q13576 1575 aa33.99■■■■□ 3.03
OTUB1-211ENST00000543004 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
OTUB1-211ENST00000543004 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
OTUB1-211ENST00000543004 RANGAP1P46060 587 aaPredicted RBP33.86■■■■□ 3.01
OTUB1-211ENST00000543004 ERCC6L2Q5T890 1561 aa33.85■■■■□ 3.01
OTUB1-211ENST00000543004 PRG4Q92954 1404 aaPredicted RBP33.81■■■■□ 3
OTUB1-211ENST00000543004 DNAJC5Q9H3Z4 198 aa33.81■■■■□ 3
OTUB1-211ENST00000543004 UGGT2Q9NYU1 1516 aa33.8■■■■□ 3
OTUB1-211ENST00000543004 TNIKQ9UKE5 1360 aa33.79■■■■□ 3
OTUB1-211ENST00000543004 ARHGEF11O15085 1522 aa33.77■■■■□ 3
OTUB1-211ENST00000543004 RIMBP3CA6NJZ7 1639 aa33.74■■■□□ 2.99
OTUB1-211ENST00000543004 RIMBP3BA6NNM3 1639 aa33.74■■■□□ 2.99
OTUB1-211ENST00000543004 RIMBP3Q9UFD9 1639 aa33.74■■■□□ 2.99
OTUB1-211ENST00000543004 DISP1Q96F81 1524 aa33.74■■■□□ 2.99
OTUB1-211ENST00000543004 KIAA0556O60303 1618 aa33.68■■■□□ 2.98
OTUB1-211ENST00000543004 SAMD9Q5K651 1589 aa33.66■■■□□ 2.98
OTUB1-211ENST00000543004 P3H3Q8IVL6 736 aa33.65■■■□□ 2.98
OTUB1-211ENST00000543004 CARMIL2Q6F5E8 1435 aa33.63■■■□□ 2.97
OTUB1-211ENST00000543004 TTBK1Q5TCY1 1321 aaPredicted RBP33.58■■■□□ 2.97
OTUB1-211ENST00000543004 ARHGAP35Q9NRY4 1499 aa33.58■■■□□ 2.97
OTUB1-211ENST00000543004 CEP162Q5TB80 1403 aa33.56■■■□□ 2.96
OTUB1-211ENST00000543004 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
OTUB1-211ENST00000543004 EFCAB5A4FU69 1503 aa33.55■■■□□ 2.96
OTUB1-211ENST00000543004 CLIP1P30622 1438 aa33.55■■■□□ 2.96
OTUB1-211ENST00000543004 FHOD3Q2V2M9 1422 aa33.53■■■□□ 2.96
OTUB1-211ENST00000543004 CYB5RLQ6IPT4 315 aa33.46■■■□□ 2.95
OTUB1-211ENST00000543004 PTPRGP23470 1445 aa33.45■■■□□ 2.95
OTUB1-211ENST00000543004 PLB1Q6P1J6 1458 aa33.32■■■□□ 2.92
OTUB1-211ENST00000543004 ABCA8O94911 1581 aa33.26■■■□□ 2.92
OTUB1-211ENST00000543004 ADCY10Q96PN6 1610 aa33.26■■■□□ 2.92
OTUB1-211ENST00000543004 UACAQ9BZF9 1416 aa33.25■■■□□ 2.91
OTUB1-211ENST00000543004 FMN1Q68DA7 1419 aa33.23■■■□□ 2.91
OTUB1-211ENST00000543004 RAPGEF6Q8TEU7 1601 aa33.22■■■□□ 2.91
OTUB1-211ENST00000543004 ABCC2Q92887 1545 aa33.19■■■□□ 2.9
OTUB1-211ENST00000543004 PCF11O94913 1555 aaKnown RBP33.17■■■□□ 2.9
OTUB1-211ENST00000543004 UHRF1BP1LA0JNW5 1464 aa33.14■■■□□ 2.9
OTUB1-211ENST00000543004 ARID3CA6NKF2 412 aa33.13■■■□□ 2.89
OTUB1-211ENST00000543004 NUP153P49790 1475 aaKnown RBP33.11■■■□□ 2.89
OTUB1-211ENST00000543004 ATP1B4Q9UN42 357 aaPredicted RBP33.11■■■□□ 2.89
OTUB1-211ENST00000543004 LRRIQ1Q96JM4 1722 aa33.09■■■□□ 2.89
OTUB1-211ENST00000543004 VPS8Q8N3P4 1428 aa33.09■■■□□ 2.89
OTUB1-211ENST00000543004 CASKIN1Q8WXD9 1431 aa33.07■■■□□ 2.88
OTUB1-211ENST00000543004 HECW1Q76N89 1606 aa33.05■■■□□ 2.88
OTUB1-211ENST00000543004 ZCCHC11Q5TAX3 1644 aaKnown RBP33.04■■■□□ 2.88
OTUB1-211ENST00000543004 FYCO1Q9BQS8 1478 aa33.02■■■□□ 2.88
OTUB1-211ENST00000543004 KDM5BQ9UGL1 1544 aa33.02■■■□□ 2.88
OTUB1-211ENST00000543004 ATP10BO94823 1461 aa33■■■□□ 2.87
OTUB1-211ENST00000543004 CDK13Q14004 1512 aaKnown RBP32.99■■■□□ 2.87
OTUB1-211ENST00000543004 EPRSP07814 1512 aaKnown RBP32.96■■■□□ 2.87
OTUB1-211ENST00000543004 NPM1P06748 294 aaKnown RBP eCLIP32.96■■■□□ 2.87
OTUB1-211ENST00000543004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.92■■■□□ 2.86
OTUB1-211ENST00000543004 HNRNPUL2Q1KMD3 747 aaKnown RBP32.92■■■□□ 2.86
OTUB1-211ENST00000543004 CCDC18Q5T9S5 1454 aa32.84■■■□□ 2.85
OTUB1-211ENST00000543004 ASXL2Q76L83 1435 aa32.83■■■□□ 2.85
OTUB1-211ENST00000543004 MAPKBP1O60336 1514 aa32.83■■■□□ 2.85
OTUB1-211ENST00000543004 CFAP43Q8NDM7 1665 aa32.79■■■□□ 2.84
OTUB1-211ENST00000543004 TIAM1Q13009 1591 aa32.77■■■□□ 2.84
OTUB1-211ENST00000543004 MAGI3Q5TCQ9 1506 aa32.77■■■□□ 2.84
OTUB1-211ENST00000543004 WDR7Q9Y4E6 1490 aa32.74■■■□□ 2.83
OTUB1-211ENST00000543004 PLEKHD1A6NEE1 506 aa32.72■■■□□ 2.83
OTUB1-211ENST00000543004 KCNH8Q96L42 1107 aa32.69■■■□□ 2.82
OTUB1-211ENST00000543004 CDK11AQ9UQ88 783 aaPredicted RBP32.66■■■□□ 2.82
OTUB1-211ENST00000543004 MAP3K1Q13233 1512 aa32.66■■■□□ 2.82
OTUB1-211ENST00000543004 APLP2Q06481 763 aa32.66■■■□□ 2.82
OTUB1-211ENST00000543004 KANK4Q5T7N3 995 aaPredicted RBP32.66■■■□□ 2.82
OTUB1-211ENST00000543004 KIF13AQ9H1H9 1805 aa32.64■■■□□ 2.82
OTUB1-211ENST00000543004 TROQ12816 1431 aaPredicted RBP32.64■■■□□ 2.82
OTUB1-211ENST00000543004 DIP2BQ9P265 1576 aa32.63■■■□□ 2.81
OTUB1-211ENST00000543004 KIF14Q15058 1648 aa32.62■■■□□ 2.81
OTUB1-211ENST00000543004 ABCC10Q5T3U5 1492 aa32.62■■■□□ 2.81
OTUB1-211ENST00000543004 MTUS2Q5JR59 1369 aa32.61■■■□□ 2.81
OTUB1-211ENST00000543004 LRRC9Q6ZRR7 1453 aa32.6■■■□□ 2.81
OTUB1-211ENST00000543004 EHBP1L1Q8N3D4 1523 aa32.56■■■□□ 2.8
OTUB1-211ENST00000543004 FAM69CQ0P6D2 419 aa32.56■■■□□ 2.8
OTUB1-211ENST00000543004 PPARGC1BQ86YN6 1023 aaKnown RBP32.55■■■□□ 2.8
OTUB1-211ENST00000543004 TRHP20396 242 aaPredicted RBP32.55■■■□□ 2.8
OTUB1-211ENST00000543004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.52■■■□□ 2.8
OTUB1-211ENST00000543004 TTC37Q6PGP7 1564 aa32.51■■■□□ 2.8
OTUB1-211ENST00000543004 GLI2P10070 1586 aa32.51■■■□□ 2.79
OTUB1-211ENST00000543004 ABCA9Q8IUA7 1624 aa32.49■■■□□ 2.79
OTUB1-211ENST00000543004 SUPT6HQ7KZ85 1726 aaKnown RBP32.46■■■□□ 2.79
OTUB1-211ENST00000543004 MAP3K4Q9Y6R4 1608 aa32.46■■■□□ 2.79
OTUB1-211ENST00000543004 TSPOAP1O95153 1857 aa32.45■■■□□ 2.79
OTUB1-211ENST00000543004 NCOA2Q15596 1464 aa32.41■■■□□ 2.78
OTUB1-211ENST00000543004 CD109Q6YHK3 1445 aa32.38■■■□□ 2.77
OTUB1-211ENST00000543004 CDC42BPAQ5VT25 1732 aa32.37■■■□□ 2.77
OTUB1-211ENST00000543004 MYO5CQ9NQX4 1742 aa32.37■■■□□ 2.77
OTUB1-211ENST00000543004 PPRC1Q5VV67 1664 aaKnown RBP32.36■■■□□ 2.77
OTUB1-211ENST00000543004 CDC42BPBQ9Y5S2 1711 aa32.32■■■□□ 2.76
OTUB1-211ENST00000543004 GPATCH8Q9UKJ3 1502 aaKnown RBP32.3■■■□□ 2.76
OTUB1-211ENST00000543004 CCNB3Q8WWL7 1395 aa32.3■■■□□ 2.76
OTUB1-211ENST00000543004 PREX2Q70Z35 1606 aa32.3■■■□□ 2.76
OTUB1-211ENST00000543004 PHLDB1Q86UU1 1377 aa32.27■■■□□ 2.76
OTUB1-211ENST00000543004 PLCH2O75038 1416 aa32.27■■■□□ 2.76
OTUB1-211ENST00000543004 ITSN2Q9NZM3 1697 aa32.24■■■□□ 2.75
OTUB1-211ENST00000543004 ARHGAP5Q13017 1502 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms