RNA–Protein interactions for RNA: ENST00000542862.1

ERVFRD-1-202, Transcript of endogenous retrovirus group FRD member 1, envelope, humanhuman

APPRIS P1 BASIC

Gene ERVFRD-1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-1-202ENST00000542862 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
ERVFRD-1-202ENST00000542862 ACIN1Q9UKV3 1341 aaKnown RBP11.72□□□□□ -0.53
ERVFRD-1-202ENST00000542862 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
ERVFRD-1-202ENST00000542862 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
ERVFRD-1-202ENST00000542862 RRBP1Q9P2E9 1410 aaKnown RBP11.71□□□□□ -0.53
ERVFRD-1-202ENST00000542862 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
ERVFRD-1-202ENST00000542862 ABCA10Q8WWZ4 1543 aa11.69□□□□□ -0.54
ERVFRD-1-202ENST00000542862 TIAM1Q13009 1591 aa11.66□□□□□ -0.54
ERVFRD-1-202ENST00000542862 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
ERVFRD-1-202ENST00000542862 RAB3GAP2Q9H2M9 1393 aa11.66□□□□□ -0.54
ERVFRD-1-202ENST00000542862 LRRC9Q6ZRR7 1453 aa11.65□□□□□ -0.54
ERVFRD-1-202ENST00000542862 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.55
ERVFRD-1-202ENST00000542862 PCF11O94913 1555 aaKnown RBP11.64□□□□□ -0.55
ERVFRD-1-202ENST00000542862 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
ERVFRD-1-202ENST00000542862 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
ERVFRD-1-202ENST00000542862 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
ERVFRD-1-202ENST00000542862 PDS5BQ9NTI5 1447 aa11.61□□□□□ -0.55
ERVFRD-1-202ENST00000542862 CENPBP07199 599 aaPredicted RBP11.61□□□□□ -0.55
ERVFRD-1-202ENST00000542862 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
ERVFRD-1-202ENST00000542862 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
ERVFRD-1-202ENST00000542862 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
ERVFRD-1-202ENST00000542862 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
ERVFRD-1-202ENST00000542862 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
ERVFRD-1-202ENST00000542862 HIRIP3Q9BW71 556 aaPredicted RBP11.57□□□□□ -0.56
ERVFRD-1-202ENST00000542862 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
ERVFRD-1-202ENST00000542862 MTUS2Q5JR59 1369 aa11.54□□□□□ -0.56
ERVFRD-1-202ENST00000542862 MAP3K1Q13233 1512 aa11.54□□□□□ -0.56
ERVFRD-1-202ENST00000542862 CUL7Q14999 1698 aa11.54□□□□□ -0.56
ERVFRD-1-202ENST00000542862 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
ERVFRD-1-202ENST00000542862 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
ERVFRD-1-202ENST00000542862 ABCA5Q8WWZ7 1642 aa11.53□□□□□ -0.56
ERVFRD-1-202ENST00000542862 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.56
ERVFRD-1-202ENST00000542862 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.57
ERVFRD-1-202ENST00000542862 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.57
ERVFRD-1-202ENST00000542862 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
ERVFRD-1-202ENST00000542862 FMN1Q68DA7 1419 aa11.51□□□□□ -0.57
ERVFRD-1-202ENST00000542862 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
ERVFRD-1-202ENST00000542862 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
ERVFRD-1-202ENST00000542862 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
ERVFRD-1-202ENST00000542862 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
ERVFRD-1-202ENST00000542862 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
ERVFRD-1-202ENST00000542862 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
ERVFRD-1-202ENST00000542862 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
ERVFRD-1-202ENST00000542862 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
ERVFRD-1-202ENST00000542862 LRRIQ1Q96JM4 1722 aa11.47□□□□□ -0.57
ERVFRD-1-202ENST00000542862 FBLN2P98095 1184 aa11.46□□□□□ -0.57
ERVFRD-1-202ENST00000542862 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
ERVFRD-1-202ENST00000542862 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
ERVFRD-1-202ENST00000542862 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
ERVFRD-1-202ENST00000542862 SAMD9Q5K651 1589 aa11.44□□□□□ -0.58
ERVFRD-1-202ENST00000542862 MAGI3Q5TCQ9 1506 aa11.44□□□□□ -0.58
ERVFRD-1-202ENST00000542862 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
ERVFRD-1-202ENST00000542862 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
ERVFRD-1-202ENST00000542862 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
ERVFRD-1-202ENST00000542862 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
ERVFRD-1-202ENST00000542862 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
ERVFRD-1-202ENST00000542862 PBRM1Q86U86 1689 aa11.4□□□□□ -0.58
ERVFRD-1-202ENST00000542862 FOXD1Q16676 465 aa11.39□□□□□ -0.59
ERVFRD-1-202ENST00000542862 CCDC18Q5T9S5 1454 aa11.39□□□□□ -0.59
ERVFRD-1-202ENST00000542862 ZNF644Q9H582 1327 aaPredicted RBP11.39□□□□□ -0.59
ERVFRD-1-202ENST00000542862 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
ERVFRD-1-202ENST00000542862 NAIPQ13075 1403 aa11.37□□□□□ -0.59
ERVFRD-1-202ENST00000542862 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
ERVFRD-1-202ENST00000542862 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
ERVFRD-1-202ENST00000542862 CHMP7Q8WUX9 453 aaPredicted RBP11.36□□□□□ -0.59
ERVFRD-1-202ENST00000542862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
ERVFRD-1-202ENST00000542862 EPRSP07814 1512 aaKnown RBP11.35□□□□□ -0.59
ERVFRD-1-202ENST00000542862 TONSLQ96HA7 1378 aa11.35□□□□□ -0.59
ERVFRD-1-202ENST00000542862 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
ERVFRD-1-202ENST00000542862 SUPT6HQ7KZ85 1726 aaKnown RBP11.34□□□□□ -0.59
ERVFRD-1-202ENST00000542862 SENP3Q9H4L4 574 aaPredicted RBP11.34□□□□□ -0.59
ERVFRD-1-202ENST00000542862 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
ERVFRD-1-202ENST00000542862 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
ERVFRD-1-202ENST00000542862 UGGT2Q9NYU1 1516 aa11.33□□□□□ -0.6
ERVFRD-1-202ENST00000542862 IFT140Q96RY7 1462 aa11.33□□□□□ -0.6
ERVFRD-1-202ENST00000542862 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
ERVFRD-1-202ENST00000542862 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
ERVFRD-1-202ENST00000542862 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
ERVFRD-1-202ENST00000542862 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
ERVFRD-1-202ENST00000542862 KDM6BO15054 1643 aa11.31□□□□□ -0.6
ERVFRD-1-202ENST00000542862 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
ERVFRD-1-202ENST00000542862 WDR62O43379 1518 aa11.29□□□□□ -0.6
ERVFRD-1-202ENST00000542862 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
ERVFRD-1-202ENST00000542862 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
ERVFRD-1-202ENST00000542862 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
ERVFRD-1-202ENST00000542862 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
ERVFRD-1-202ENST00000542862 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
ERVFRD-1-202ENST00000542862 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
ERVFRD-1-202ENST00000542862 MPHOSPH9Q99550 1183 aa11.28□□□□□ -0.6
ERVFRD-1-202ENST00000542862 JPH4Q96JJ6 628 aa11.27□□□□□ -0.6
ERVFRD-1-202ENST00000542862 TIMELESSQ9UNS1 1208 aa11.27□□□□□ -0.6
ERVFRD-1-202ENST00000542862 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.61
ERVFRD-1-202ENST00000542862 PLB1Q6P1J6 1458 aa11.27□□□□□ -0.61
ERVFRD-1-202ENST00000542862 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
ERVFRD-1-202ENST00000542862 KIAA0556O60303 1618 aa11.25□□□□□ -0.61
ERVFRD-1-202ENST00000542862 L3MBTL2Q969R5 705 aa11.24□□□□□ -0.61
ERVFRD-1-202ENST00000542862 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
ERVFRD-1-202ENST00000542862 TCOF1Q13428 1488 aaKnown RBP11.23□□□□□ -0.61
ERVFRD-1-202ENST00000542862 HSPA5P11021 654 aaKnown RBP11.22□□□□□ -0.61
ERVFRD-1-202ENST00000542862 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms