RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
SPTB-205ENST00000542694 EEA1Q15075 1411 aa25.97■■□□□ 1.75
SPTB-205ENST00000542694 ARAP1Q96P48 1450 aa25.94■■□□□ 1.74
SPTB-205ENST00000542694 CSRNP3Q8WYN3 585 aa25.93■■□□□ 1.74
SPTB-205ENST00000542694 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
SPTB-205ENST00000542694 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
SPTB-205ENST00000542694 PRXQ9BXM0 1461 aa25.84■■□□□ 1.73
SPTB-205ENST00000542694 CARMIL2Q6F5E8 1435 aa25.78■■□□□ 1.72
SPTB-205ENST00000542694 IQGAP2Q13576 1575 aa25.77■■□□□ 1.72
SPTB-205ENST00000542694 ERCC6L2Q5T890 1561 aa25.76■■□□□ 1.71
SPTB-205ENST00000542694 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
SPTB-205ENST00000542694 TNIKQ9UKE5 1360 aa25.65■■□□□ 1.7
SPTB-205ENST00000542694 UGGT2Q9NYU1 1516 aa25.64■■□□□ 1.7
SPTB-205ENST00000542694 PTPRGP23470 1445 aa25.63■■□□□ 1.69
SPTB-205ENST00000542694 CTTNBP2Q8WZ74 1663 aa25.63■■□□□ 1.69
SPTB-205ENST00000542694 NPM1P06748 294 aaKnown RBP eCLIP25.62■■□□□ 1.69
SPTB-205ENST00000542694 GOLGA3Q08378 1498 aa25.6■■□□□ 1.69
SPTB-205ENST00000542694 TRHP20396 242 aaPredicted RBP25.56■■□□□ 1.68
SPTB-205ENST00000542694 KIF21BO75037 1637 aa25.55■■□□□ 1.68
SPTB-205ENST00000542694 DISP1Q96F81 1524 aa25.55■■□□□ 1.68
SPTB-205ENST00000542694 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
SPTB-205ENST00000542694 UBTFP17480 764 aaKnown RBP25.49■■□□□ 1.67
SPTB-205ENST00000542694 KIAA0556O60303 1618 aa25.48■■□□□ 1.67
SPTB-205ENST00000542694 UACAQ9BZF9 1416 aa25.44■■□□□ 1.66
SPTB-205ENST00000542694 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
SPTB-205ENST00000542694 ADCY10Q96PN6 1610 aa25.4■■□□□ 1.66
SPTB-205ENST00000542694 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
SPTB-205ENST00000542694 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
SPTB-205ENST00000542694 ABCC2Q92887 1545 aa25.35■■□□□ 1.65
SPTB-205ENST00000542694 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
SPTB-205ENST00000542694 MAPKBP1O60336 1514 aa25.32■■□□□ 1.64
SPTB-205ENST00000542694 SAMD9Q5K651 1589 aa25.3■■□□□ 1.64
SPTB-205ENST00000542694 EFCAB5A4FU69 1503 aa25.28■■□□□ 1.64
SPTB-205ENST00000542694 KDM5BQ9UGL1 1544 aa25.25■■□□□ 1.63
SPTB-205ENST00000542694 PLB1Q6P1J6 1458 aa25.24■■□□□ 1.63
SPTB-205ENST00000542694 FAM69CQ0P6D2 419 aa25.24■■□□□ 1.63
SPTB-205ENST00000542694 ABCC10Q5T3U5 1492 aa25.22■■□□□ 1.63
SPTB-205ENST00000542694 ABCA8O94911 1581 aa25.22■■□□□ 1.63
SPTB-205ENST00000542694 ASXL2Q76L83 1435 aa25.18■■□□□ 1.62
SPTB-205ENST00000542694 FHOD3Q2V2M9 1422 aa25.17■■□□□ 1.62
SPTB-205ENST00000542694 ZCCHC11Q5TAX3 1644 aaKnown RBP25.12■■□□□ 1.61
SPTB-205ENST00000542694 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
SPTB-205ENST00000542694 KIF13AQ9H1H9 1805 aa25.1■■□□□ 1.61
SPTB-205ENST00000542694 RAPGEF6Q8TEU7 1601 aa25.1■■□□□ 1.61
SPTB-205ENST00000542694 DIP2BQ9P265 1576 aa25.1■■□□□ 1.61
SPTB-205ENST00000542694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.08■■□□□ 1.61
SPTB-205ENST00000542694 HNRNPUL2Q1KMD3 747 aaKnown RBP25.08■■□□□ 1.61
SPTB-205ENST00000542694 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.6
SPTB-205ENST00000542694 ATP10BO94823 1461 aa25.06■■□□□ 1.6
SPTB-205ENST00000542694 WDR7Q9Y4E6 1490 aa25.06■■□□□ 1.6
SPTB-205ENST00000542694 GLI2P10070 1586 aa25.04■■□□□ 1.6
SPTB-205ENST00000542694 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
SPTB-205ENST00000542694 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
SPTB-205ENST00000542694 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
SPTB-205ENST00000542694 PLEKHD1A6NEE1 506 aa25■■□□□ 1.59
SPTB-205ENST00000542694 CLIP1P30622 1438 aa25■■□□□ 1.59
SPTB-205ENST00000542694 NUP153P49790 1475 aaKnown RBP24.99■■□□□ 1.59
SPTB-205ENST00000542694 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
SPTB-205ENST00000542694 CDK11AQ9UQ88 783 aaPredicted RBP24.95■■□□□ 1.58
SPTB-205ENST00000542694 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
SPTB-205ENST00000542694 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.58
SPTB-205ENST00000542694 TSPOAP1O95153 1857 aa24.89■■□□□ 1.58
SPTB-205ENST00000542694 HECW1Q76N89 1606 aa24.89■■□□□ 1.57
SPTB-205ENST00000542694 CD109Q6YHK3 1445 aa24.88■■□□□ 1.57
SPTB-205ENST00000542694 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
SPTB-205ENST00000542694 CASKIN1Q8WXD9 1431 aa24.86■■□□□ 1.57
SPTB-205ENST00000542694 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
SPTB-205ENST00000542694 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
SPTB-205ENST00000542694 MAGI3Q5TCQ9 1506 aa24.81■■□□□ 1.56
SPTB-205ENST00000542694 CCDC18Q5T9S5 1454 aa24.79■■□□□ 1.56
SPTB-205ENST00000542694 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
SPTB-205ENST00000542694 CDK13Q14004 1512 aaKnown RBP24.77■■□□□ 1.56
SPTB-205ENST00000542694 PHLDB1Q86UU1 1377 aa24.77■■□□□ 1.56
SPTB-205ENST00000542694 ABCA9Q8IUA7 1624 aa24.75■■□□□ 1.55
SPTB-205ENST00000542694 KDM6BO15054 1643 aa24.75■■□□□ 1.55
SPTB-205ENST00000542694 PPRC1Q5VV67 1664 aaKnown RBP24.75■■□□□ 1.55
SPTB-205ENST00000542694 PCF11O94913 1555 aaKnown RBP24.71■■□□□ 1.55
SPTB-205ENST00000542694 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
SPTB-205ENST00000542694 NEO1Q92859 1461 aa24.64■■□□□ 1.54
SPTB-205ENST00000542694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.64■■□□□ 1.53
SPTB-205ENST00000542694 LRRIQ1Q96JM4 1722 aa24.6■■□□□ 1.53
SPTB-205ENST00000542694 KIF14Q15058 1648 aa24.6■■□□□ 1.53
SPTB-205ENST00000542694 ARAP3Q8WWN8 1544 aa24.6■■□□□ 1.53
SPTB-205ENST00000542694 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
SPTB-205ENST00000542694 PLCH2O75038 1416 aa24.59■■□□□ 1.53
SPTB-205ENST00000542694 VPS8Q8N3P4 1428 aa24.58■■□□□ 1.53
SPTB-205ENST00000542694 COL17A1Q9UMD9 1497 aaPredicted RBP24.57■■□□□ 1.52
SPTB-205ENST00000542694 MTUS2Q5JR59 1369 aa24.55■■□□□ 1.52
SPTB-205ENST00000542694 CFAP74Q9C0B2 1584 aa24.55■■□□□ 1.52
SPTB-205ENST00000542694 FANCAO15360 1455 aa24.55■■□□□ 1.52
SPTB-205ENST00000542694 TTC37Q6PGP7 1564 aa24.54■■□□□ 1.52
SPTB-205ENST00000542694 AKNAQ7Z591 1439 aa24.53■■□□□ 1.52
SPTB-205ENST00000542694 APLP2Q06481 763 aa24.5■■□□□ 1.51
SPTB-205ENST00000542694 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
SPTB-205ENST00000542694 DENND4BO75064 1496 aaPredicted RBP24.47■■□□□ 1.51
SPTB-205ENST00000542694 RAPGEF3O95398 923 aa24.45■■□□□ 1.5
SPTB-205ENST00000542694 ARHGAP5Q13017 1502 aa24.44■■□□□ 1.5
SPTB-205ENST00000542694 EHBP1L1Q8N3D4 1523 aa24.42■■□□□ 1.5
SPTB-205ENST00000542694 ADGRL1O94910 1474 aa24.42■■□□□ 1.5
SPTB-205ENST00000542694 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms