RNA–Protein interactions for RNA: ENST00000542671.5

CDKL1-211, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 5

Gene CDKL1, Length 487 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-211ENST00000542671 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
CDKL1-211ENST00000542671 CTTNBP2Q8WZ74 1663 aa23.57■■□□□ 1.36
CDKL1-211ENST00000542671 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
CDKL1-211ENST00000542671 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
CDKL1-211ENST00000542671 IQGAP2Q13576 1575 aa23.56■■□□□ 1.36
CDKL1-211ENST00000542671 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
CDKL1-211ENST00000542671 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
CDKL1-211ENST00000542671 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
CDKL1-211ENST00000542671 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
CDKL1-211ENST00000542671 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
CDKL1-211ENST00000542671 UGGT2Q9NYU1 1516 aa23.47■■□□□ 1.35
CDKL1-211ENST00000542671 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
CDKL1-211ENST00000542671 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
CDKL1-211ENST00000542671 CARMIL2Q6F5E8 1435 aa23.39■■□□□ 1.33
CDKL1-211ENST00000542671 DISP1Q96F81 1524 aa23.37■■□□□ 1.33
CDKL1-211ENST00000542671 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
CDKL1-211ENST00000542671 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
CDKL1-211ENST00000542671 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
CDKL1-211ENST00000542671 SAMD9Q5K651 1589 aa23.29■■□□□ 1.32
CDKL1-211ENST00000542671 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
CDKL1-211ENST00000542671 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
CDKL1-211ENST00000542671 PTPRGP23470 1445 aa23.24■■□□□ 1.31
CDKL1-211ENST00000542671 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
CDKL1-211ENST00000542671 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
CDKL1-211ENST00000542671 ARHGAP35Q9NRY4 1499 aa23.13■■□□□ 1.29
CDKL1-211ENST00000542671 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
CDKL1-211ENST00000542671 P3H3Q8IVL6 736 aa23.12■■□□□ 1.29
CDKL1-211ENST00000542671 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
CDKL1-211ENST00000542671 UACAQ9BZF9 1416 aa23.1■■□□□ 1.29
CDKL1-211ENST00000542671 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
CDKL1-211ENST00000542671 FHOD3Q2V2M9 1422 aa23.08■■□□□ 1.29
CDKL1-211ENST00000542671 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.28
CDKL1-211ENST00000542671 ABCA8O94911 1581 aa23.07■■□□□ 1.28
CDKL1-211ENST00000542671 ABCC2Q92887 1545 aa23.07■■□□□ 1.28
CDKL1-211ENST00000542671 CLIP1P30622 1438 aa23.07■■□□□ 1.28
CDKL1-211ENST00000542671 PLB1Q6P1J6 1458 aa23.04■■□□□ 1.28
CDKL1-211ENST00000542671 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
CDKL1-211ENST00000542671 FMN1Q68DA7 1419 aa23■■□□□ 1.27
CDKL1-211ENST00000542671 RAPGEF6Q8TEU7 1601 aa22.99■■□□□ 1.27
CDKL1-211ENST00000542671 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
CDKL1-211ENST00000542671 NPM1P06748 294 aaKnown RBP eCLIP22.98■■□□□ 1.27
CDKL1-211ENST00000542671 MAPKBP1O60336 1514 aa22.93■■□□□ 1.26
CDKL1-211ENST00000542671 ZCCHC11Q5TAX3 1644 aaKnown RBP22.91■■□□□ 1.26
CDKL1-211ENST00000542671 NUP153P49790 1475 aaKnown RBP22.9■■□□□ 1.26
CDKL1-211ENST00000542671 ATP10BO94823 1461 aa22.87■■□□□ 1.25
CDKL1-211ENST00000542671 CASKIN1Q8WXD9 1431 aa22.86■■□□□ 1.25
CDKL1-211ENST00000542671 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
CDKL1-211ENST00000542671 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
CDKL1-211ENST00000542671 PCF11O94913 1555 aaKnown RBP22.81■■□□□ 1.24
CDKL1-211ENST00000542671 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
CDKL1-211ENST00000542671 EPRSP07814 1512 aaKnown RBP22.78■■□□□ 1.24
CDKL1-211ENST00000542671 ABCC10Q5T3U5 1492 aa22.77■■□□□ 1.24
CDKL1-211ENST00000542671 LRRIQ1Q96JM4 1722 aa22.77■■□□□ 1.23
CDKL1-211ENST00000542671 WDR7Q9Y4E6 1490 aa22.76■■□□□ 1.23
CDKL1-211ENST00000542671 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
CDKL1-211ENST00000542671 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
CDKL1-211ENST00000542671 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
CDKL1-211ENST00000542671 DIP2BQ9P265 1576 aa22.73■■□□□ 1.23
CDKL1-211ENST00000542671 ARID3CA6NKF2 412 aa22.73■■□□□ 1.23
CDKL1-211ENST00000542671 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
CDKL1-211ENST00000542671 CDK13Q14004 1512 aaKnown RBP22.72■■□□□ 1.23
CDKL1-211ENST00000542671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
CDKL1-211ENST00000542671 HNRNPUL2Q1KMD3 747 aaKnown RBP22.71■■□□□ 1.23
CDKL1-211ENST00000542671 GLI2P10070 1586 aa22.71■■□□□ 1.23
CDKL1-211ENST00000542671 TRHP20396 242 aaPredicted RBP22.7■■□□□ 1.22
CDKL1-211ENST00000542671 PLEKHD1A6NEE1 506 aa22.69■■□□□ 1.22
CDKL1-211ENST00000542671 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
CDKL1-211ENST00000542671 FAM69CQ0P6D2 419 aa22.66■■□□□ 1.22
CDKL1-211ENST00000542671 TROQ12816 1431 aaPredicted RBP22.6■■□□□ 1.21
CDKL1-211ENST00000542671 KCNH8Q96L42 1107 aa22.6■■□□□ 1.21
CDKL1-211ENST00000542671 MAP3K4Q9Y6R4 1608 aa22.6■■□□□ 1.21
CDKL1-211ENST00000542671 CFAP43Q8NDM7 1665 aa22.59■■□□□ 1.21
CDKL1-211ENST00000542671 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
CDKL1-211ENST00000542671 ABCA9Q8IUA7 1624 aa22.58■■□□□ 1.21
CDKL1-211ENST00000542671 TIAM1Q13009 1591 aa22.55■■□□□ 1.2
CDKL1-211ENST00000542671 MAGI3Q5TCQ9 1506 aa22.55■■□□□ 1.2
CDKL1-211ENST00000542671 KIF14Q15058 1648 aa22.52■■□□□ 1.2
CDKL1-211ENST00000542671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.52■■□□□ 1.19
CDKL1-211ENST00000542671 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
CDKL1-211ENST00000542671 CD109Q6YHK3 1445 aa22.51■■□□□ 1.19
CDKL1-211ENST00000542671 PPRC1Q5VV67 1664 aaKnown RBP22.51■■□□□ 1.19
CDKL1-211ENST00000542671 EHBP1L1Q8N3D4 1523 aa22.49■■□□□ 1.19
CDKL1-211ENST00000542671 MTUS2Q5JR59 1369 aa22.49■■□□□ 1.19
CDKL1-211ENST00000542671 TTC37Q6PGP7 1564 aa22.47■■□□□ 1.19
CDKL1-211ENST00000542671 APLP2Q06481 763 aa22.46■■□□□ 1.19
CDKL1-211ENST00000542671 TEX14Q8IWB6 1497 aa22.46■■□□□ 1.19
CDKL1-211ENST00000542671 LRRC9Q6ZRR7 1453 aa22.45■■□□□ 1.18
CDKL1-211ENST00000542671 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
CDKL1-211ENST00000542671 MYO5CQ9NQX4 1742 aa22.42■■□□□ 1.18
CDKL1-211ENST00000542671 PLCH2O75038 1416 aa22.4■■□□□ 1.18
CDKL1-211ENST00000542671 SUPT6HQ7KZ85 1726 aaKnown RBP22.4■■□□□ 1.18
CDKL1-211ENST00000542671 PHLDB1Q86UU1 1377 aa22.38■■□□□ 1.17
CDKL1-211ENST00000542671 KANK4Q5T7N3 995 aaPredicted RBP22.38■■□□□ 1.17
CDKL1-211ENST00000542671 NEO1Q92859 1461 aa22.37■■□□□ 1.17
CDKL1-211ENST00000542671 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
CDKL1-211ENST00000542671 CFAP74Q9C0B2 1584 aa22.36■■□□□ 1.17
CDKL1-211ENST00000542671 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
CDKL1-211ENST00000542671 CDC42BPBQ9Y5S2 1711 aa22.35■■□□□ 1.17
CDKL1-211ENST00000542671 NCOA2Q15596 1464 aa22.34■■□□□ 1.17
CDKL1-211ENST00000542671 GPATCH8Q9UKJ3 1502 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms