RNA–Protein interactions for RNA: ENST00000542192.5

CACFD1-207, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-207ENST00000542192 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
CACFD1-207ENST00000542192 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
CACFD1-207ENST00000542192 TIAM1Q13009 1591 aa23.77■■□□□ 1.4
CACFD1-207ENST00000542192 ABCA5Q8WWZ7 1642 aa23.75■■□□□ 1.39
CACFD1-207ENST00000542192 MAP3K1Q13233 1512 aa23.74■■□□□ 1.39
CACFD1-207ENST00000542192 FHOD3Q2V2M9 1422 aa23.72■■□□□ 1.39
CACFD1-207ENST00000542192 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
CACFD1-207ENST00000542192 CCNB3Q8WWL7 1395 aa23.72■■□□□ 1.39
CACFD1-207ENST00000542192 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
CACFD1-207ENST00000542192 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
CACFD1-207ENST00000542192 PCF11O94913 1555 aaKnown RBP23.7■■□□□ 1.38
CACFD1-207ENST00000542192 LRRC9Q6ZRR7 1453 aa23.68■■□□□ 1.38
CACFD1-207ENST00000542192 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
CACFD1-207ENST00000542192 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
CACFD1-207ENST00000542192 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
CACFD1-207ENST00000542192 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.38
CACFD1-207ENST00000542192 ATP1B4Q9UN42 357 aaPredicted RBP23.64■■□□□ 1.38
CACFD1-207ENST00000542192 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
CACFD1-207ENST00000542192 CFAP43Q8NDM7 1665 aa23.62■■□□□ 1.37
CACFD1-207ENST00000542192 ITGAEP38570 1179 aa23.62■■□□□ 1.37
CACFD1-207ENST00000542192 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
CACFD1-207ENST00000542192 PHLDB1Q86UU1 1377 aa23.59■■□□□ 1.37
CACFD1-207ENST00000542192 FYCO1Q9BQS8 1478 aa23.58■■□□□ 1.37
CACFD1-207ENST00000542192 CASKIN1Q8WXD9 1431 aa23.58■■□□□ 1.36
CACFD1-207ENST00000542192 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.36
CACFD1-207ENST00000542192 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
CACFD1-207ENST00000542192 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
CACFD1-207ENST00000542192 FMN1Q68DA7 1419 aa23.51■■□□□ 1.35
CACFD1-207ENST00000542192 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
CACFD1-207ENST00000542192 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
CACFD1-207ENST00000542192 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
CACFD1-207ENST00000542192 FAM50AQ14320 339 aaKnown RBP23.46■■□□□ 1.35
CACFD1-207ENST00000542192 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
CACFD1-207ENST00000542192 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
CACFD1-207ENST00000542192 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
CACFD1-207ENST00000542192 ADAMTS12P58397 1594 aa23.39■■□□□ 1.34
CACFD1-207ENST00000542192 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
CACFD1-207ENST00000542192 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
CACFD1-207ENST00000542192 SETD5Q9C0A6 1442 aa23.37■■□□□ 1.33
CACFD1-207ENST00000542192 WDR62O43379 1518 aa23.36■■□□□ 1.33
CACFD1-207ENST00000542192 IFT140Q96RY7 1462 aa23.35■■□□□ 1.33
CACFD1-207ENST00000542192 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
CACFD1-207ENST00000542192 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
CACFD1-207ENST00000542192 MAPKBP1O60336 1514 aa23.3■■□□□ 1.32
CACFD1-207ENST00000542192 FGD6Q6ZV73 1430 aa23.29■■□□□ 1.32
CACFD1-207ENST00000542192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.29■■□□□ 1.32
CACFD1-207ENST00000542192 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
CACFD1-207ENST00000542192 NCOA2Q15596 1464 aa23.24■■□□□ 1.31
CACFD1-207ENST00000542192 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
CACFD1-207ENST00000542192 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
CACFD1-207ENST00000542192 MIER1Q8N108 512 aa23.22■■□□□ 1.31
CACFD1-207ENST00000542192 EHBP1L1Q8N3D4 1523 aa23.2■■□□□ 1.3
CACFD1-207ENST00000542192 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
CACFD1-207ENST00000542192 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
CACFD1-207ENST00000542192 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
CACFD1-207ENST00000542192 UGGT2Q9NYU1 1516 aa23.18■■□□□ 1.3
CACFD1-207ENST00000542192 PTPRKQ15262 1439 aa23.18■■□□□ 1.3
CACFD1-207ENST00000542192 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
CACFD1-207ENST00000542192 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
CACFD1-207ENST00000542192 EPRSP07814 1512 aaKnown RBP23.14■■□□□ 1.3
CACFD1-207ENST00000542192 ARHGEF11O15085 1522 aa23.14■■□□□ 1.29
CACFD1-207ENST00000542192 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.29
CACFD1-207ENST00000542192 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
CACFD1-207ENST00000542192 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
CACFD1-207ENST00000542192 CDK13Q14004 1512 aaKnown RBP23.12■■□□□ 1.29
CACFD1-207ENST00000542192 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
CACFD1-207ENST00000542192 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
CACFD1-207ENST00000542192 PTPN23Q9H3S7 1636 aa23.09■■□□□ 1.29
CACFD1-207ENST00000542192 KIAA0556O60303 1618 aa23.08■■□□□ 1.28
CACFD1-207ENST00000542192 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
CACFD1-207ENST00000542192 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
CACFD1-207ENST00000542192 NAIPQ13075 1403 aa23.03■■□□□ 1.28
CACFD1-207ENST00000542192 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
CACFD1-207ENST00000542192 CEP170Q5SW79 1584 aa23■■□□□ 1.27
CACFD1-207ENST00000542192 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
CACFD1-207ENST00000542192 SYNJ2O15056 1496 aa23■■□□□ 1.27
CACFD1-207ENST00000542192 FBLN2P98095 1184 aa22.99■■□□□ 1.27
CACFD1-207ENST00000542192 NUP153P49790 1475 aaKnown RBP22.97■■□□□ 1.27
CACFD1-207ENST00000542192 UACAQ9BZF9 1416 aa22.96■■□□□ 1.27
CACFD1-207ENST00000542192 CHIC2Q9UKJ5 165 aa22.95■■□□□ 1.27
CACFD1-207ENST00000542192 RAPGEF6Q8TEU7 1601 aa22.95■■□□□ 1.26
CACFD1-207ENST00000542192 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
CACFD1-207ENST00000542192 TIMELESSQ9UNS1 1208 aa22.93■■□□□ 1.26
CACFD1-207ENST00000542192 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
CACFD1-207ENST00000542192 NUP160Q12769 1436 aa22.89■■□□□ 1.25
CACFD1-207ENST00000542192 PPP1R15AO75807 674 aaPredicted RBP22.88■■□□□ 1.25
CACFD1-207ENST00000542192 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
CACFD1-207ENST00000542192 PLB1Q6P1J6 1458 aa22.86■■□□□ 1.25
CACFD1-207ENST00000542192 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
CACFD1-207ENST00000542192 KDM6BO15054 1643 aa22.84■■□□□ 1.25
CACFD1-207ENST00000542192 CDK11AQ9UQ88 783 aaPredicted RBP22.83■■□□□ 1.24
CACFD1-207ENST00000542192 ZNF644Q9H582 1327 aaPredicted RBP22.82■■□□□ 1.24
CACFD1-207ENST00000542192 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
CACFD1-207ENST00000542192 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
CACFD1-207ENST00000542192 TONSLQ96HA7 1378 aa22.81■■□□□ 1.24
CACFD1-207ENST00000542192 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
CACFD1-207ENST00000542192 DENND4BO75064 1496 aaPredicted RBP22.78■■□□□ 1.24
CACFD1-207ENST00000542192 DAPK1P53355 1430 aa22.77■■□□□ 1.24
CACFD1-207ENST00000542192 TROQ12816 1431 aaPredicted RBP22.77■■□□□ 1.24
CACFD1-207ENST00000542192 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms