RNA–Protein interactions for RNA: ENST00000542191.5

SNCAIP-222, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5 BASIC

Gene SNCAIP, Length 2,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-222ENST00000542191 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
SNCAIP-222ENST00000542191 FHOD3Q2V2M9 1422 aa21.17■□□□□ 0.98
SNCAIP-222ENST00000542191 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
SNCAIP-222ENST00000542191 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
SNCAIP-222ENST00000542191 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.96
SNCAIP-222ENST00000542191 CUL7Q14999 1698 aa20.98■□□□□ 0.95
SNCAIP-222ENST00000542191 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
SNCAIP-222ENST00000542191 WDR62O43379 1518 aa20.95■□□□□ 0.94
SNCAIP-222ENST00000542191 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
SNCAIP-222ENST00000542191 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
SNCAIP-222ENST00000542191 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
SNCAIP-222ENST00000542191 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
SNCAIP-222ENST00000542191 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
SNCAIP-222ENST00000542191 THOC2Q8NI27 1593 aaKnown RBP20.9■□□□□ 0.94
SNCAIP-222ENST00000542191 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
SNCAIP-222ENST00000542191 GRIN2BQ13224 1484 aa20.89■□□□□ 0.93
SNCAIP-222ENST00000542191 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
SNCAIP-222ENST00000542191 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
SNCAIP-222ENST00000542191 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
SNCAIP-222ENST00000542191 PHLDB1Q86UU1 1377 aa20.81■□□□□ 0.92
SNCAIP-222ENST00000542191 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
SNCAIP-222ENST00000542191 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
SNCAIP-222ENST00000542191 LRRC9Q6ZRR7 1453 aa20.76■□□□□ 0.91
SNCAIP-222ENST00000542191 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
SNCAIP-222ENST00000542191 IQGAP2Q13576 1575 aa20.73■□□□□ 0.91
SNCAIP-222ENST00000542191 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
SNCAIP-222ENST00000542191 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
SNCAIP-222ENST00000542191 EFCAB5A4FU69 1503 aa20.7■□□□□ 0.9
SNCAIP-222ENST00000542191 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
SNCAIP-222ENST00000542191 LRRIQ1Q96JM4 1722 aa20.69■□□□□ 0.9
SNCAIP-222ENST00000542191 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
SNCAIP-222ENST00000542191 SAMD9Q5K651 1589 aa20.67■□□□□ 0.9
SNCAIP-222ENST00000542191 CDK13Q14004 1512 aaKnown RBP20.66■□□□□ 0.9
SNCAIP-222ENST00000542191 FYCO1Q9BQS8 1478 aa20.66■□□□□ 0.9
SNCAIP-222ENST00000542191 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
SNCAIP-222ENST00000542191 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
SNCAIP-222ENST00000542191 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
SNCAIP-222ENST00000542191 CHIC2Q9UKJ5 165 aa20.62■□□□□ 0.89
SNCAIP-222ENST00000542191 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
SNCAIP-222ENST00000542191 CFAP43Q8NDM7 1665 aa20.59■□□□□ 0.89
SNCAIP-222ENST00000542191 MAGI3Q5TCQ9 1506 aa20.58■□□□□ 0.89
SNCAIP-222ENST00000542191 DISP1Q96F81 1524 aa20.58■□□□□ 0.88
SNCAIP-222ENST00000542191 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
SNCAIP-222ENST00000542191 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
SNCAIP-222ENST00000542191 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
SNCAIP-222ENST00000542191 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.88
SNCAIP-222ENST00000542191 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
SNCAIP-222ENST00000542191 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
SNCAIP-222ENST00000542191 KIAA0556O60303 1618 aa20.5■□□□□ 0.87
SNCAIP-222ENST00000542191 EPRSP07814 1512 aaKnown RBP20.5■□□□□ 0.87
SNCAIP-222ENST00000542191 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
SNCAIP-222ENST00000542191 ZNF644Q9H582 1327 aaPredicted RBP20.49■□□□□ 0.87
SNCAIP-222ENST00000542191 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
SNCAIP-222ENST00000542191 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
SNCAIP-222ENST00000542191 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
SNCAIP-222ENST00000542191 UGGT2Q9NYU1 1516 aa20.47■□□□□ 0.87
SNCAIP-222ENST00000542191 FGD6Q6ZV73 1430 aa20.46■□□□□ 0.87
SNCAIP-222ENST00000542191 PTPRKQ15262 1439 aa20.44■□□□□ 0.86
SNCAIP-222ENST00000542191 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
SNCAIP-222ENST00000542191 CHD1O14646 1710 aa20.43■□□□□ 0.86
SNCAIP-222ENST00000542191 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
SNCAIP-222ENST00000542191 NUP153P49790 1475 aaKnown RBP20.42■□□□□ 0.86
SNCAIP-222ENST00000542191 HECW1Q76N89 1606 aa20.41■□□□□ 0.86
SNCAIP-222ENST00000542191 NUP160Q12769 1436 aa20.4■□□□□ 0.86
SNCAIP-222ENST00000542191 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
SNCAIP-222ENST00000542191 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
SNCAIP-222ENST00000542191 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
SNCAIP-222ENST00000542191 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
SNCAIP-222ENST00000542191 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
SNCAIP-222ENST00000542191 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
SNCAIP-222ENST00000542191 RAPGEF6Q8TEU7 1601 aa20.35■□□□□ 0.85
SNCAIP-222ENST00000542191 EHBP1L1Q8N3D4 1523 aa20.34■□□□□ 0.85
SNCAIP-222ENST00000542191 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
SNCAIP-222ENST00000542191 KCNH8Q96L42 1107 aa20.31■□□□□ 0.84
SNCAIP-222ENST00000542191 FOXD1Q16676 465 aa20.3■□□□□ 0.84
SNCAIP-222ENST00000542191 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
SNCAIP-222ENST00000542191 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
SNCAIP-222ENST00000542191 PTPRGP23470 1445 aa20.29■□□□□ 0.84
SNCAIP-222ENST00000542191 PTPN23Q9H3S7 1636 aa20.28■□□□□ 0.84
SNCAIP-222ENST00000542191 CDK11AQ9UQ88 783 aaPredicted RBP20.27■□□□□ 0.84
SNCAIP-222ENST00000542191 HIRIP3Q9BW71 556 aaPredicted RBP20.26■□□□□ 0.83
SNCAIP-222ENST00000542191 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
SNCAIP-222ENST00000542191 KIF14Q15058 1648 aa20.25■□□□□ 0.83
SNCAIP-222ENST00000542191 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
SNCAIP-222ENST00000542191 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
SNCAIP-222ENST00000542191 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
SNCAIP-222ENST00000542191 ATP10BO94823 1461 aa20.2■□□□□ 0.82
SNCAIP-222ENST00000542191 MYT1Q01538 1121 aa20.19■□□□□ 0.82
SNCAIP-222ENST00000542191 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
SNCAIP-222ENST00000542191 NAIPQ13075 1403 aa20.17■□□□□ 0.82
SNCAIP-222ENST00000542191 KDM6BO15054 1643 aa20.17■□□□□ 0.82
SNCAIP-222ENST00000542191 TROQ12816 1431 aaPredicted RBP20.16■□□□□ 0.82
SNCAIP-222ENST00000542191 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNCAIP-222ENST00000542191 ABCA8O94911 1581 aa20.11■□□□□ 0.81
SNCAIP-222ENST00000542191 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
SNCAIP-222ENST00000542191 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
SNCAIP-222ENST00000542191 GPATCH8Q9UKJ3 1502 aaKnown RBP20.09■□□□□ 0.81
SNCAIP-222ENST00000542191 ABCC5O15440 1437 aa20.08■□□□□ 0.8
SNCAIP-222ENST00000542191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
SNCAIP-222ENST00000542191 DAPK1P53355 1430 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms