RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
TNFSF13B-206ENST00000542136 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
TNFSF13B-206ENST00000542136 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
TNFSF13B-206ENST00000542136 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
TNFSF13B-206ENST00000542136 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
TNFSF13B-206ENST00000542136 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
TNFSF13B-206ENST00000542136 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
TNFSF13B-206ENST00000542136 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
TNFSF13B-206ENST00000542136 ERCC6L2Q5T890 1561 aa22.94■■□□□ 1.26
TNFSF13B-206ENST00000542136 CARMIL2Q6F5E8 1435 aa22.87■■□□□ 1.25
TNFSF13B-206ENST00000542136 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
TNFSF13B-206ENST00000542136 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
TNFSF13B-206ENST00000542136 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
TNFSF13B-206ENST00000542136 KIF21BO75037 1637 aa22.81■■□□□ 1.24
TNFSF13B-206ENST00000542136 DISP1Q96F81 1524 aa22.78■■□□□ 1.24
TNFSF13B-206ENST00000542136 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
TNFSF13B-206ENST00000542136 PTPRGP23470 1445 aa22.75■■□□□ 1.23
TNFSF13B-206ENST00000542136 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
TNFSF13B-206ENST00000542136 KIAA0556O60303 1618 aa22.7■■□□□ 1.22
TNFSF13B-206ENST00000542136 UHRF1BP1LA0JNW5 1464 aa22.63■■□□□ 1.21
TNFSF13B-206ENST00000542136 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
TNFSF13B-206ENST00000542136 ADCY10Q96PN6 1610 aa22.61■■□□□ 1.21
TNFSF13B-206ENST00000542136 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
TNFSF13B-206ENST00000542136 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
TNFSF13B-206ENST00000542136 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
TNFSF13B-206ENST00000542136 ABCC2Q92887 1545 aa22.55■■□□□ 1.2
TNFSF13B-206ENST00000542136 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
TNFSF13B-206ENST00000542136 MAPKBP1O60336 1514 aa22.53■■□□□ 1.2
TNFSF13B-206ENST00000542136 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
TNFSF13B-206ENST00000542136 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.2
TNFSF13B-206ENST00000542136 KDM5BQ9UGL1 1544 aa22.5■■□□□ 1.19
TNFSF13B-206ENST00000542136 ABCA8O94911 1581 aa22.48■■□□□ 1.19
TNFSF13B-206ENST00000542136 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
TNFSF13B-206ENST00000542136 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
TNFSF13B-206ENST00000542136 ABCC10Q5T3U5 1492 aa22.42■■□□□ 1.18
TNFSF13B-206ENST00000542136 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
TNFSF13B-206ENST00000542136 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
TNFSF13B-206ENST00000542136 FHOD3Q2V2M9 1422 aa22.38■■□□□ 1.17
TNFSF13B-206ENST00000542136 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
TNFSF13B-206ENST00000542136 ARHGAP35Q9NRY4 1499 aa22.37■■□□□ 1.17
TNFSF13B-206ENST00000542136 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
TNFSF13B-206ENST00000542136 KIF13AQ9H1H9 1805 aa22.34■■□□□ 1.17
TNFSF13B-206ENST00000542136 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
TNFSF13B-206ENST00000542136 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
TNFSF13B-206ENST00000542136 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
TNFSF13B-206ENST00000542136 DIP2BQ9P265 1576 aa22.33■■□□□ 1.16
TNFSF13B-206ENST00000542136 ATP10BO94823 1461 aa22.31■■□□□ 1.16
TNFSF13B-206ENST00000542136 GLI2P10070 1586 aa22.29■■□□□ 1.16
TNFSF13B-206ENST00000542136 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
TNFSF13B-206ENST00000542136 WDR7Q9Y4E6 1490 aa22.28■■□□□ 1.16
TNFSF13B-206ENST00000542136 CLIP1P30622 1438 aa22.25■■□□□ 1.15
TNFSF13B-206ENST00000542136 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
TNFSF13B-206ENST00000542136 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
TNFSF13B-206ENST00000542136 PLEKHD1A6NEE1 506 aa22.16■■□□□ 1.14
TNFSF13B-206ENST00000542136 HECW1Q76N89 1606 aa22.16■■□□□ 1.14
TNFSF13B-206ENST00000542136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
TNFSF13B-206ENST00000542136 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
TNFSF13B-206ENST00000542136 CEP162Q5TB80 1403 aa22.14■■□□□ 1.14
TNFSF13B-206ENST00000542136 CASKIN1Q8WXD9 1431 aa22.14■■□□□ 1.14
TNFSF13B-206ENST00000542136 MAP3K4Q9Y6R4 1608 aa22.14■■□□□ 1.14
TNFSF13B-206ENST00000542136 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
TNFSF13B-206ENST00000542136 KCNH8Q96L42 1107 aa22.13■■□□□ 1.13
TNFSF13B-206ENST00000542136 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
TNFSF13B-206ENST00000542136 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
TNFSF13B-206ENST00000542136 FYCO1Q9BQS8 1478 aa22.09■■□□□ 1.13
TNFSF13B-206ENST00000542136 CD109Q6YHK3 1445 aa22.08■■□□□ 1.13
TNFSF13B-206ENST00000542136 TEX14Q8IWB6 1497 aa22.08■■□□□ 1.12
TNFSF13B-206ENST00000542136 MAGI3Q5TCQ9 1506 aa22.07■■□□□ 1.12
TNFSF13B-206ENST00000542136 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
TNFSF13B-206ENST00000542136 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
TNFSF13B-206ENST00000542136 CCDC18Q5T9S5 1454 aa22.06■■□□□ 1.12
TNFSF13B-206ENST00000542136 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
TNFSF13B-206ENST00000542136 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
TNFSF13B-206ENST00000542136 PPRC1Q5VV67 1664 aaKnown RBP22.05■■□□□ 1.12
TNFSF13B-206ENST00000542136 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
TNFSF13B-206ENST00000542136 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
TNFSF13B-206ENST00000542136 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
TNFSF13B-206ENST00000542136 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
TNFSF13B-206ENST00000542136 KDM6BO15054 1643 aa21.95■■□□□ 1.1
TNFSF13B-206ENST00000542136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.94■■□□□ 1.1
TNFSF13B-206ENST00000542136 NEO1Q92859 1461 aa21.91■■□□□ 1.1
TNFSF13B-206ENST00000542136 VPS8Q8N3P4 1428 aa21.91■■□□□ 1.1
TNFSF13B-206ENST00000542136 ARAP3Q8WWN8 1544 aa21.9■■□□□ 1.1
TNFSF13B-206ENST00000542136 PLCH2O75038 1416 aa21.88■■□□□ 1.09
TNFSF13B-206ENST00000542136 KIF14Q15058 1648 aa21.88■■□□□ 1.09
TNFSF13B-206ENST00000542136 COL17A1Q9UMD9 1497 aaPredicted RBP21.87■■□□□ 1.09
TNFSF13B-206ENST00000542136 TTC37Q6PGP7 1564 aa21.86■■□□□ 1.09
TNFSF13B-206ENST00000542136 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
TNFSF13B-206ENST00000542136 FANCAO15360 1455 aa21.82■■□□□ 1.08
TNFSF13B-206ENST00000542136 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
TNFSF13B-206ENST00000542136 MTUS2Q5JR59 1369 aa21.8■■□□□ 1.08
TNFSF13B-206ENST00000542136 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
TNFSF13B-206ENST00000542136 MYO5CQ9NQX4 1742 aa21.79■■□□□ 1.08
TNFSF13B-206ENST00000542136 AKNAQ7Z591 1439 aa21.79■■□□□ 1.08
TNFSF13B-206ENST00000542136 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
TNFSF13B-206ENST00000542136 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
TNFSF13B-206ENST00000542136 DENND4BO75064 1496 aaPredicted RBP21.72■■□□□ 1.07
TNFSF13B-206ENST00000542136 PREX2Q70Z35 1606 aa21.7■■□□□ 1.06
TNFSF13B-206ENST00000542136 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
TNFSF13B-206ENST00000542136 GPATCH8Q9UKJ3 1502 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms