RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 CYB5RLQ6IPT4 315 aa11.97□□□□□ -0.49
NPIPB4-213ENST00000541329 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
NPIPB4-213ENST00000541329 CLIP1P30622 1438 aa11.95□□□□□ -0.5
NPIPB4-213ENST00000541329 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
NPIPB4-213ENST00000541329 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
NPIPB4-213ENST00000541329 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
NPIPB4-213ENST00000541329 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
NPIPB4-213ENST00000541329 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
NPIPB4-213ENST00000541329 ADAMTS12P58397 1594 aa11.89□□□□□ -0.51
NPIPB4-213ENST00000541329 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
NPIPB4-213ENST00000541329 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
NPIPB4-213ENST00000541329 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
NPIPB4-213ENST00000541329 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
NPIPB4-213ENST00000541329 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
NPIPB4-213ENST00000541329 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
NPIPB4-213ENST00000541329 TTBK1Q5TCY1 1321 aaPredicted RBP11.83□□□□□ -0.52
NPIPB4-213ENST00000541329 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
NPIPB4-213ENST00000541329 TRIM26Q12899 539 aaPredicted RBP11.79□□□□□ -0.52
NPIPB4-213ENST00000541329 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
NPIPB4-213ENST00000541329 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.52
NPIPB4-213ENST00000541329 IQGAP2Q13576 1575 aa11.76□□□□□ -0.53
NPIPB4-213ENST00000541329 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
NPIPB4-213ENST00000541329 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
NPIPB4-213ENST00000541329 FBLN2P98095 1184 aa11.75□□□□□ -0.53
NPIPB4-213ENST00000541329 FHOD3Q2V2M9 1422 aa11.75□□□□□ -0.53
NPIPB4-213ENST00000541329 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
NPIPB4-213ENST00000541329 CHD1O14646 1710 aa11.74□□□□□ -0.53
NPIPB4-213ENST00000541329 APLP2Q06481 763 aa11.74□□□□□ -0.53
NPIPB4-213ENST00000541329 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
NPIPB4-213ENST00000541329 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
NPIPB4-213ENST00000541329 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-213ENST00000541329 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
NPIPB4-213ENST00000541329 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-213ENST00000541329 KIAA0586Q9BVV6 1533 aa11.67□□□□□ -0.54
NPIPB4-213ENST00000541329 ZEB1P37275 1124 aaPredicted RBP11.67□□□□□ -0.54
NPIPB4-213ENST00000541329 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
NPIPB4-213ENST00000541329 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
NPIPB4-213ENST00000541329 UGGT2Q9NYU1 1516 aa11.65□□□□□ -0.54
NPIPB4-213ENST00000541329 TIAM1Q13009 1591 aa11.65□□□□□ -0.54
NPIPB4-213ENST00000541329 KIAA0556O60303 1618 aa11.64□□□□□ -0.55
NPIPB4-213ENST00000541329 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
NPIPB4-213ENST00000541329 NUP160Q12769 1436 aa11.63□□□□□ -0.55
NPIPB4-213ENST00000541329 FMN1Q68DA7 1419 aa11.63□□□□□ -0.55
NPIPB4-213ENST00000541329 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
NPIPB4-213ENST00000541329 CASKIN1Q8WXD9 1431 aa11.62□□□□□ -0.55
NPIPB4-213ENST00000541329 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
NPIPB4-213ENST00000541329 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
NPIPB4-213ENST00000541329 HECW1Q76N89 1606 aa11.58□□□□□ -0.56
NPIPB4-213ENST00000541329 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
NPIPB4-213ENST00000541329 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
NPIPB4-213ENST00000541329 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
NPIPB4-213ENST00000541329 RAPGEF6Q8TEU7 1601 aa11.55□□□□□ -0.56
NPIPB4-213ENST00000541329 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
NPIPB4-213ENST00000541329 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
NPIPB4-213ENST00000541329 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
NPIPB4-213ENST00000541329 CDK13Q14004 1512 aaKnown RBP11.52□□□□□ -0.57
NPIPB4-213ENST00000541329 FBXO41Q8TF61 875 aa11.52□□□□□ -0.57
NPIPB4-213ENST00000541329 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.57
NPIPB4-213ENST00000541329 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
NPIPB4-213ENST00000541329 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
NPIPB4-213ENST00000541329 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
NPIPB4-213ENST00000541329 FOXD1Q16676 465 aa11.5□□□□□ -0.57
NPIPB4-213ENST00000541329 HNRNPUL2Q1KMD3 747 aaKnown RBP11.5□□□□□ -0.57
NPIPB4-213ENST00000541329 EPRSP07814 1512 aaKnown RBP11.5□□□□□ -0.57
NPIPB4-213ENST00000541329 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
NPIPB4-213ENST00000541329 SUPT6HQ7KZ85 1726 aaKnown RBP11.49□□□□□ -0.57
NPIPB4-213ENST00000541329 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
NPIPB4-213ENST00000541329 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
NPIPB4-213ENST00000541329 MAGI3Q5TCQ9 1506 aa11.48□□□□□ -0.57
NPIPB4-213ENST00000541329 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
NPIPB4-213ENST00000541329 NUP153P49790 1475 aaKnown RBP11.47□□□□□ -0.57
NPIPB4-213ENST00000541329 SOCS7O14512 581 aa11.47□□□□□ -0.57
NPIPB4-213ENST00000541329 PHLDB1Q86UU1 1377 aa11.46□□□□□ -0.57
NPIPB4-213ENST00000541329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
NPIPB4-213ENST00000541329 ABCA8O94911 1581 aa11.45□□□□□ -0.58
NPIPB4-213ENST00000541329 RRBP1Q9P2E9 1410 aaKnown RBP11.45□□□□□ -0.58
NPIPB4-213ENST00000541329 CCNB3Q8WWL7 1395 aa11.43□□□□□ -0.58
NPIPB4-213ENST00000541329 ITGAEP38570 1179 aa11.43□□□□□ -0.58
NPIPB4-213ENST00000541329 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
NPIPB4-213ENST00000541329 PTPRGP23470 1445 aa11.43□□□□□ -0.58
NPIPB4-213ENST00000541329 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
NPIPB4-213ENST00000541329 MYT1Q01538 1121 aa11.4□□□□□ -0.58
NPIPB4-213ENST00000541329 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
NPIPB4-213ENST00000541329 KIF14Q15058 1648 aa11.38□□□□□ -0.59
NPIPB4-213ENST00000541329 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
NPIPB4-213ENST00000541329 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
NPIPB4-213ENST00000541329 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
NPIPB4-213ENST00000541329 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
NPIPB4-213ENST00000541329 ATP10BO94823 1461 aa11.37□□□□□ -0.59
NPIPB4-213ENST00000541329 UACAQ9BZF9 1416 aa11.36□□□□□ -0.59
NPIPB4-213ENST00000541329 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
NPIPB4-213ENST00000541329 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
NPIPB4-213ENST00000541329 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
NPIPB4-213ENST00000541329 TROQ12816 1431 aaPredicted RBP11.35□□□□□ -0.59
NPIPB4-213ENST00000541329 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
NPIPB4-213ENST00000541329 ILDR2Q71H61 639 aa11.34□□□□□ -0.59
NPIPB4-213ENST00000541329 ZCCHC11Q5TAX3 1644 aaKnown RBP11.34□□□□□ -0.59
NPIPB4-213ENST00000541329 ITSN2Q9NZM3 1697 aa11.33□□□□□ -0.6
NPIPB4-213ENST00000541329 CDC42BPAQ5VT25 1732 aa11.32□□□□□ -0.6
NPIPB4-213ENST00000541329 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms