RNA–Protein interactions for RNA: ENST00000541097.5

LDHA-219, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-219ENST00000541097 IGF1RP08069 1367 aa11.79□□□□□ -0.52
LDHA-219ENST00000541097 CHD1O14646 1710 aa11.79□□□□□ -0.52
LDHA-219ENST00000541097 ERICH3Q5RHP9 1530 aa11.79□□□□□ -0.52
LDHA-219ENST00000541097 NUP160Q12769 1436 aa11.78□□□□□ -0.52
LDHA-219ENST00000541097 GRIN2AQ12879 1464 aa11.77□□□□□ -0.52
LDHA-219ENST00000541097 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
LDHA-219ENST00000541097 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
LDHA-219ENST00000541097 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
LDHA-219ENST00000541097 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
LDHA-219ENST00000541097 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
LDHA-219ENST00000541097 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
LDHA-219ENST00000541097 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
LDHA-219ENST00000541097 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
LDHA-219ENST00000541097 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
LDHA-219ENST00000541097 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
LDHA-219ENST00000541097 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
LDHA-219ENST00000541097 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
LDHA-219ENST00000541097 SHROOM2Q13796 1616 aa11.61□□□□□ -0.55
LDHA-219ENST00000541097 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
LDHA-219ENST00000541097 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
LDHA-219ENST00000541097 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
LDHA-219ENST00000541097 CUL7Q14999 1698 aa11.56□□□□□ -0.56
LDHA-219ENST00000541097 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
LDHA-219ENST00000541097 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
LDHA-219ENST00000541097 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
LDHA-219ENST00000541097 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
LDHA-219ENST00000541097 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
LDHA-219ENST00000541097 PTPRGP23470 1445 aa11.51□□□□□ -0.57
LDHA-219ENST00000541097 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
LDHA-219ENST00000541097 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
LDHA-219ENST00000541097 TNIKQ9UKE5 1360 aa11.49□□□□□ -0.57
LDHA-219ENST00000541097 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
LDHA-219ENST00000541097 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
LDHA-219ENST00000541097 IQGAP2Q13576 1575 aa11.44□□□□□ -0.58
LDHA-219ENST00000541097 EEA1Q15075 1411 aa11.43□□□□□ -0.58
LDHA-219ENST00000541097 FAM69CQ0P6D2 419 aa11.42□□□□□ -0.58
LDHA-219ENST00000541097 UHRF1BP1LA0JNW5 1464 aa11.41□□□□□ -0.58
LDHA-219ENST00000541097 ABCC10Q5T3U5 1492 aa11.41□□□□□ -0.58
LDHA-219ENST00000541097 UACAQ9BZF9 1416 aa11.41□□□□□ -0.58
LDHA-219ENST00000541097 MAPKBP1O60336 1514 aa11.4□□□□□ -0.58
LDHA-219ENST00000541097 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
LDHA-219ENST00000541097 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
LDHA-219ENST00000541097 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
LDHA-219ENST00000541097 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
LDHA-219ENST00000541097 ABCC2Q92887 1545 aa11.38□□□□□ -0.59
LDHA-219ENST00000541097 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
LDHA-219ENST00000541097 FAM9AQ8IZU1 332 aaPredicted RBP11.35□□□□□ -0.59
LDHA-219ENST00000541097 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
LDHA-219ENST00000541097 ASXL2Q76L83 1435 aa11.34□□□□□ -0.59
LDHA-219ENST00000541097 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
LDHA-219ENST00000541097 KIAA0556O60303 1618 aa11.32□□□□□ -0.6
LDHA-219ENST00000541097 P3H3Q8IVL6 736 aa11.3□□□□□ -0.6
LDHA-219ENST00000541097 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
LDHA-219ENST00000541097 ABCA8O94911 1581 aa11.26□□□□□ -0.61
LDHA-219ENST00000541097 GLI2P10070 1586 aa11.26□□□□□ -0.61
LDHA-219ENST00000541097 C1QBPQ07021 282 aaKnown RBP11.26□□□□□ -0.61
LDHA-219ENST00000541097 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
LDHA-219ENST00000541097 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
LDHA-219ENST00000541097 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
LDHA-219ENST00000541097 UBTFP17480 764 aaKnown RBP11.24□□□□□ -0.61
LDHA-219ENST00000541097 ATP10BO94823 1461 aa11.24□□□□□ -0.61
LDHA-219ENST00000541097 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
LDHA-219ENST00000541097 WDR7Q9Y4E6 1490 aa11.23□□□□□ -0.61
LDHA-219ENST00000541097 KIF21BO75037 1637 aa11.22□□□□□ -0.61
LDHA-219ENST00000541097 SAMD9Q5K651 1589 aa11.21□□□□□ -0.61
LDHA-219ENST00000541097 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
LDHA-219ENST00000541097 ZCCHC11Q5TAX3 1644 aaKnown RBP11.19□□□□□ -0.62
LDHA-219ENST00000541097 FHOD3Q2V2M9 1422 aa11.18□□□□□ -0.62
LDHA-219ENST00000541097 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
LDHA-219ENST00000541097 COL17A1Q9UMD9 1497 aaPredicted RBP11.18□□□□□ -0.62
LDHA-219ENST00000541097 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
LDHA-219ENST00000541097 ARID3CA6NKF2 412 aa11.17□□□□□ -0.62
LDHA-219ENST00000541097 MAGI3Q5TCQ9 1506 aa11.16□□□□□ -0.62
LDHA-219ENST00000541097 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
LDHA-219ENST00000541097 NUP153P49790 1475 aaKnown RBP11.16□□□□□ -0.62
LDHA-219ENST00000541097 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
LDHA-219ENST00000541097 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
LDHA-219ENST00000541097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
LDHA-219ENST00000541097 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
LDHA-219ENST00000541097 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
LDHA-219ENST00000541097 MAP3K4Q9Y6R4 1608 aa11.13□□□□□ -0.63
LDHA-219ENST00000541097 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
LDHA-219ENST00000541097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
LDHA-219ENST00000541097 ARHGAP35Q9NRY4 1499 aa11.12□□□□□ -0.63
LDHA-219ENST00000541097 FMN1Q68DA7 1419 aa11.12□□□□□ -0.63
LDHA-219ENST00000541097 KDM6BO15054 1643 aa11.12□□□□□ -0.63
LDHA-219ENST00000541097 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
LDHA-219ENST00000541097 PPRC1Q5VV67 1664 aaKnown RBP11.11□□□□□ -0.63
LDHA-219ENST00000541097 RAPGEF6Q8TEU7 1601 aa11.1□□□□□ -0.63
LDHA-219ENST00000541097 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
LDHA-219ENST00000541097 ARAP3Q8WWN8 1544 aa11.08□□□□□ -0.64
LDHA-219ENST00000541097 TSPOAP1O95153 1857 aa11.07□□□□□ -0.64
LDHA-219ENST00000541097 CFAP43Q8NDM7 1665 aa11.05□□□□□ -0.64
LDHA-219ENST00000541097 ATP1B4Q9UN42 357 aaPredicted RBP11.05□□□□□ -0.64
LDHA-219ENST00000541097 NEO1Q92859 1461 aa11.05□□□□□ -0.64
LDHA-219ENST00000541097 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
LDHA-219ENST00000541097 ABCA9Q8IUA7 1624 aa11.04□□□□□ -0.64
LDHA-219ENST00000541097 PLCH2O75038 1416 aa11.01□□□□□ -0.65
LDHA-219ENST00000541097 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
LDHA-219ENST00000541097 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms