RNA–Protein interactions for RNA: ENST00000541081.1

TM7SF3-209, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-209ENST00000541081 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
TM7SF3-209ENST00000541081 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
TM7SF3-209ENST00000541081 CEP170Q5SW79 1584 aa16■□□□□ 0.15
TM7SF3-209ENST00000541081 NUP160Q12769 1436 aa15.97■□□□□ 0.15
TM7SF3-209ENST00000541081 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
TM7SF3-209ENST00000541081 CUL7Q14999 1698 aa15.92■□□□□ 0.14
TM7SF3-209ENST00000541081 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
TM7SF3-209ENST00000541081 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
TM7SF3-209ENST00000541081 IGF1RP08069 1367 aa15.88■□□□□ 0.13
TM7SF3-209ENST00000541081 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
TM7SF3-209ENST00000541081 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
TM7SF3-209ENST00000541081 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
TM7SF3-209ENST00000541081 PRG4Q92954 1404 aaPredicted RBP15.83■□□□□ 0.12
TM7SF3-209ENST00000541081 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
TM7SF3-209ENST00000541081 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
TM7SF3-209ENST00000541081 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.1
TM7SF3-209ENST00000541081 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
TM7SF3-209ENST00000541081 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
TM7SF3-209ENST00000541081 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
TM7SF3-209ENST00000541081 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
TM7SF3-209ENST00000541081 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
TM7SF3-209ENST00000541081 CTTNBP2Q8WZ74 1663 aa15.62■□□□□ 0.09
TM7SF3-209ENST00000541081 PTPRGP23470 1445 aa15.6■□□□□ 0.09
TM7SF3-209ENST00000541081 TNIKQ9UKE5 1360 aa15.6■□□□□ 0.09
TM7SF3-209ENST00000541081 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
TM7SF3-209ENST00000541081 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
TM7SF3-209ENST00000541081 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
TM7SF3-209ENST00000541081 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
TM7SF3-209ENST00000541081 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
TM7SF3-209ENST00000541081 KIAA0556O60303 1618 aa15.54■□□□□ 0.08
TM7SF3-209ENST00000541081 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
TM7SF3-209ENST00000541081 EEA1Q15075 1411 aa15.51■□□□□ 0.07
TM7SF3-209ENST00000541081 ABCC10Q5T3U5 1492 aa15.51■□□□□ 0.07
TM7SF3-209ENST00000541081 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
TM7SF3-209ENST00000541081 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
TM7SF3-209ENST00000541081 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
TM7SF3-209ENST00000541081 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
TM7SF3-209ENST00000541081 ABCC2Q92887 1545 aa15.49■□□□□ 0.07
TM7SF3-209ENST00000541081 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
TM7SF3-209ENST00000541081 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
TM7SF3-209ENST00000541081 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
TM7SF3-209ENST00000541081 PLB1Q6P1J6 1458 aa15.42■□□□□ 0.06
TM7SF3-209ENST00000541081 ZCCHC11Q5TAX3 1644 aaKnown RBP15.42■□□□□ 0.06
TM7SF3-209ENST00000541081 ASXL2Q76L83 1435 aa15.42■□□□□ 0.06
TM7SF3-209ENST00000541081 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
TM7SF3-209ENST00000541081 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
TM7SF3-209ENST00000541081 KIF21BO75037 1637 aa15.38■□□□□ 0.05
TM7SF3-209ENST00000541081 ABCA8O94911 1581 aa15.37■□□□□ 0.05
TM7SF3-209ENST00000541081 SAMD9Q5K651 1589 aa15.36■□□□□ 0.05
TM7SF3-209ENST00000541081 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
TM7SF3-209ENST00000541081 GLI2P10070 1586 aa15.35■□□□□ 0.05
TM7SF3-209ENST00000541081 KDM6BO15054 1643 aa15.34■□□□□ 0.05
TM7SF3-209ENST00000541081 EPRSP07814 1512 aaKnown RBP15.33■□□□□ 0.04
TM7SF3-209ENST00000541081 WDR7Q9Y4E6 1490 aa15.31■□□□□ 0.04
TM7SF3-209ENST00000541081 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
TM7SF3-209ENST00000541081 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
TM7SF3-209ENST00000541081 PPRC1Q5VV67 1664 aaKnown RBP15.29■□□□□ 0.04
TM7SF3-209ENST00000541081 MAP3K4Q9Y6R4 1608 aa15.29■□□□□ 0.04
TM7SF3-209ENST00000541081 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
TM7SF3-209ENST00000541081 ARID3CA6NKF2 412 aa15.27■□□□□ 0.04
TM7SF3-209ENST00000541081 UBTFP17480 764 aaKnown RBP15.27■□□□□ 0.04
TM7SF3-209ENST00000541081 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
TM7SF3-209ENST00000541081 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
TM7SF3-209ENST00000541081 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
TM7SF3-209ENST00000541081 TEX14Q8IWB6 1497 aa15.25■□□□□ 0.03
TM7SF3-209ENST00000541081 ATP10BO94823 1461 aa15.24■□□□□ 0.03
TM7SF3-209ENST00000541081 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
TM7SF3-209ENST00000541081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
TM7SF3-209ENST00000541081 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
TM7SF3-209ENST00000541081 CD109Q6YHK3 1445 aa15.2■□□□□ 0.02
TM7SF3-209ENST00000541081 NUP153P49790 1475 aaKnown RBP15.19■□□□□ 0.02
TM7SF3-209ENST00000541081 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
TM7SF3-209ENST00000541081 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
TM7SF3-209ENST00000541081 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
TM7SF3-209ENST00000541081 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
TM7SF3-209ENST00000541081 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
TM7SF3-209ENST00000541081 FMN1Q68DA7 1419 aa15.12■□□□□ 0.01
TM7SF3-209ENST00000541081 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
TM7SF3-209ENST00000541081 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
TM7SF3-209ENST00000541081 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
TM7SF3-209ENST00000541081 HECW1Q76N89 1606 aa15.1■□□□□ 0.01
TM7SF3-209ENST00000541081 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
TM7SF3-209ENST00000541081 PHLDB1Q86UU1 1377 aa15.04■□□□□ -0
TM7SF3-209ENST00000541081 ARAP3Q8WWN8 1544 aa15.03■□□□□ -0
TM7SF3-209ENST00000541081 NEO1Q92859 1461 aa15.03■□□□□ -0
TM7SF3-209ENST00000541081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.02■□□□□ -0
TM7SF3-209ENST00000541081 KDM4FA0A1W2PPD8 638 aa15.02■□□□□ -0
TM7SF3-209ENST00000541081 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
TM7SF3-209ENST00000541081 TTC37Q6PGP7 1564 aa15.01□□□□□ -0.01
TM7SF3-209ENST00000541081 CFAP74Q9C0B2 1584 aa15.01□□□□□ -0.01
TM7SF3-209ENST00000541081 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
TM7SF3-209ENST00000541081 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
TM7SF3-209ENST00000541081 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
TM7SF3-209ENST00000541081 CLIP1P30622 1438 aa14.99□□□□□ -0.01
TM7SF3-209ENST00000541081 FANCAO15360 1455 aa14.98□□□□□ -0.01
TM7SF3-209ENST00000541081 KIF14Q15058 1648 aa14.96□□□□□ -0.01
TM7SF3-209ENST00000541081 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
TM7SF3-209ENST00000541081 CASKIN1Q8WXD9 1431 aa14.96□□□□□ -0.01
TM7SF3-209ENST00000541081 MYO5CQ9NQX4 1742 aa14.96□□□□□ -0.01
TM7SF3-209ENST00000541081 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms